Michal Shapira

Also affiliated with University of California, Berkeley

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 15 papers. Top paper: “Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data”.

Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data

Nature Genetics(2003)10.1038/ng1165

N/A

1.1DataRank · unranked

1701 citations

Michael Shapira, Prisca Liberali, David Botstein, Daphne Koller, Nir Friedman +3 more

CeMbio - The Caenorhabditis elegans Microbiome Resource

G3 Genes Genomes Genetics(2020)10.1534/g3.120.401309

N/A

0DataRank · unranked

195 citations

Adrien Assié, Johannes Zimmermann, Fan Zhang, Adina-Malin Tietje, Sarah Arnaud Marsh +6 more

Interactions with a Complex Microbiota Mediate a Trade-Off between the Host Development Rate and Heat Stress Resistance

Microorganisms(2020)10.3390/microorganisms8111781

N/A

0DataRank · unranked

18 citations

Isabella Ramirez, Vivek Narayan, Medha Somayaji, Maya Para, Sarah Pi +5 more

A newly identified Leishmania IF4E-interacting protein, Leish4E-IP2, modulates the activity of cap-binding protein paralogs

Nucleic Acids Research(2020)10.1093/nar/gkaa173

N/A

0DataRank · unranked

14 citations

Shimi Meleppattu, Rohit Shrivastava, Nofar Baron, Ayelet Gilad, Gerhard Wagner +3 more

CeMbio - The C. elegans microbiome resource

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.22.055426

N/A

0DataRank · unranked

2 citations

Adrien Assié, Johannes Zimmermann, Fan Zhang, Adina-Malin Tietje, Sarah Arnaud Marsh +6 more

Host Preference of Beneficial Commensals in a Microbially-Diverse Environment

Frontiers in Cellular and Infection Microbiology(2022)10.3389/fcimb.2022.795343

N/A

0DataRank · unranked

27 citations

Rebecca Choi, Méril Massot, Barbara Pees, Vivek Narayan, Michal Shapira +1 more

Compost Microcosms as Microbially Diverse, Natural-like Environments for Microbiome Research in Caenorhabditis elegans

Journal of Visualized Experiments(2022)10.3791/64393

N/A

0DataRank · unranked

5 citations

Rahul Bodkhe, Michal Shapira, Kenneth Trang

Compost Microcosms as Microbially Diverse, Natural-like Environments for Microbiome Research in Caenorhabditis elegans

Journal of Visualized Experiments(2022)10.3791/64393-v

N/A

0DataRank · unranked

0 citations

Rahul Bodkhe, Michal Shapira, Kenneth Trang

An Enterobacteriaceae bloom in aging animals is restrained by the gut microbiome

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.13.544815

N/A

0DataRank · unranked

3 citations

Rahul Bodkhe, Barbara Pees, Daniel Kim, Maureen Berg, David Monnin +5 more

Microbiome remodeling through bacterial competition and host behavior enables rapid adaptation to environmental toxins

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.21.545768

N/A

0DataRank · unranked

1 citations

Olga M. Pérez-Carrascal, Catherin DeSousa, Da Kyung Jung, Seneca Bohley, Lila Wijaya +4 more

Identification of intestinal mediators of Caenorhabditis elegans DBL-1/BMP immune signaling shaping gut microbiome composition

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.26.564221

N/A

0DataRank · unranked

0 citations

Barbara Pees, Siavash Karimzadegan, Rahul Bodkhe, Sabrina Hammond, Michal Shapira +1 more

An Enterobacteriaceae Bloom in Aging Animals is Restrained by the Gut Microbiome

PubMed(2024)10.59368/agingbio.20240024

N/A

0DataRank · unranked

5 citations

Rebecca Choi, Rahul Bodkhe, Barbara Pees, Daniel Kim, Maureen Berg +6 more

Emergence of dauer larvae in Caenorhabditis elegans disrupts continuity of host-microbiome interactions

FEMS Microbiology Ecology(2024)10.1093/femsec/fiae149

N/A

0DataRank · unranked

4 citations

Kenneth Trang, Sabrina Hammond, Da Kyung Jung, Michal Shapira, Rahul Bodkhe

The West African lungfish secretes a living cocoon during aestivation with uncertain antimicrobial function

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.05.602297

N/A

0DataRank · unranked

0 citations

R. K. Bharadwaj, Charles Tralka, Kenneth Trang, D. Nos Aka, M. Alami +11 more

Gut microbiome remodeling provides protection from an environmental toxin

iScience(2025)10.1016/j.isci.2025.112209

N/A

0DataRank · unranked

4 citations

Samantha Khoury, Olga M. Pérez-Carrascal, Catherin DeSousa, Da Kyung Jung, Seneca Bohley +4 more