Marcelo D. T. Torres

Also affiliated with Translational Therapeutics (United States), University of Pennsylvania

Immunology and MicrobiologyBiochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 42 papers. Top paper: “Molecular de-extinction of ancient antimicrobial peptides enabled by machine learning”.

Molecular de-extinction of ancient antimicrobial peptides enabled by machine learning

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.15.516443

N/A

0.345DataRank · unranked

9 citations

Marcelo D. T. Torres, Marcelo C. R. Melo, César de la Fuente‐Núñez, Jacqueline R. M. A. Maasch

Mining for encrypted peptide antibiotics in the human proteome

Nature Biomedical Engineering(2021)10.1038/s41551-021-00801-1

N/A

0DataRank · unranked

193 citations

Marcelo C. R. Melo, Laurice Flowers, Orlando Crescenzi, Eugenio Notomista, César de la Fuente‐Núñez +1 more

Low-cost biosensor for rapid detection of SARS-CoV-2 at the point of care

Matter(2021)10.1016/j.matt.2021.05.003

N/A

0DataRank · unranked

123 citations

William R. de Araújo, Lucas F. de Lima, André L. Ferreira, César de la Fuente‐Núñez, Marcelo D. T. Torres

Low-Cost Optodiagnostic for Minute-Time Scale Detection of SARS-CoV-2

ACS Nano(2021)10.1021/acsnano.1c03236

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0DataRank · unranked

63 citations

Lucas F. de Lima, Marcelo D. T. Torres, William R. de Araújo, César de la Fuente‐Núñez, André L. Ferreira

Synthetic Antibiotic Derived from Sequences Encrypted in a Protein from Human Plasma

ACS Nano(2022)10.1021/acsnano.1c04496

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0DataRank · unranked

50 citations

Marcelo D. T. Torres, Rosa Gaglione, Eliana Dell’Olmo, Rocco Di Girolamo, Andrea Bosso +6 more

Debulking different Corona (SARS-CoV-2 delta, omicron, OC43) and Influenza (H1N1, H3N2) virus strains by plant viral trap proteins in chewing gums to decrease infection and transmission

Biomaterials(2022)10.1016/j.biomaterials.2022.121671

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0DataRank · unranked

33 citations

Smruti K. Nair, Hancheng Guan, Yuwei Guo, Rachel J. Kulchar, Marcelo D. T. Torres +20 more

An N-capping asparagine–lysine–proline (NKP) motif contributes to a hybrid flexible/stable multifunctional peptide scaffold

Chemical Science(2022)10.1039/d1sc06998e

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0DataRank · unranked

13 citations

Lai Yue Chan, Elizabete de Souza Cândido, Danieli Fernanda Buccini, Samilla B. Rezende, Marcelo D. T. Torres +9 more

Detection of SARS-CoV-2 with RAPID: A prospective cohort study

iScience(2022)10.1016/j.isci.2022.104055

N/A

0DataRank · unranked

9 citations

Lucas F. de Lima, André L. Ferreira, William R. de Araújo, Paul L. Callahan, Antonio Dávila +3 more

Molecular tools for probing the microbiome

Current Opinion in Structural Biology(2022)10.1016/j.sbi.2022.102415

N/A

0DataRank · unranked

4 citations

César de la Fuente‐Núñez, Marcelo D. T. Torres

Author Correction: Mining for encrypted peptide antibiotics in the human proteome

Nature Biomedical Engineering(2022)10.1038/s41551-022-00967-2

N/A

0DataRank · unranked

14 citations

Marcelo C. R. Melo, Laurice Flowers, Orlando Crescenzi, Eugenio Notomista, César de la Fuente‐Núñez +1 more

Molecular de-extinction of ancient antimicrobial peptides enabled by machine learning

Cell Host & Microbe(2023)10.1016/j.chom.2023.07.001

N/A

0DataRank · unranked

146 citations

Marcelo D. T. Torres, Marcelo C. R. Melo, César de la Fuente‐Núñez, Jacqueline R. M. A. Maasch

Deep learning tools to accelerate antibiotic discovery

Expert Opinion on Drug Discovery(2023)10.1080/17460441.2023.2250721

N/A

0DataRank · unranked

63 citations

Mojtaba Bagheri, Marcelo D. T. Torres, Fang Wan, César de la Fuente‐Núñez, Angela Cesaro

Structure-function-guided design of synthetic peptides with anti-infective activity derived from wasp venom

Cell Reports Physical Science(2023)10.1016/j.xcrp.2023.101459

N/A

0DataRank · unranked

38 citations

Lucía Ageitos, Marcelo D. T. Torres, Esther Broset Blasco, Sebahat Öztekin, César de la Fuente‐Núñez +1 more

Molecular hybridization strategy for tuning bioactive peptide function

Communications Biology(2023)10.1038/s42003-023-05254-7

N/A

0DataRank · unranked

20 citations

Marcelo D. T. Torres, Cyntia Silva Oliveira, Adriana F. Silva, Gislaine Patricia Andrade, Yiming Wang +8 more

Stability of Ti3C2Tx MXene Films and Devices under Clinical Sterilization Processes

ACS Nano(2023)10.1021/acsnano.3c01525

N/A

0DataRank · unranked

17 citations

Doris Xu, Brendan B. Murphy, Kateryna Shevchuk, Sneha Shankar, Mark Anayee +6 more

Recombinant production of antimicrobial peptides in plants

Biotechnology Advances(2023)10.1016/j.biotechadv.2023.108296

N/A

0DataRank · unranked

23 citations

Marcelo D. T. Torres, César de la Fuente‐Núñez, Farhad Nazarian‐Firouzabadi

Rapid and accurate detection of herpes simplex virus type 2 using a low-cost electrochemical biosensor

Cell Reports Physical Science(2023)10.1016/j.xcrp.2023.101513

N/A

0DataRank · unranked

11 citations

André L. Ferreira, Sita Awasthi, Marcelo D. T. Torres, Harvey M. Friedman, Gary H. Cohen +3 more

Computational exploration of the global microbiome for antibiotic discovery

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.31.555663

N/A

0DataRank · unranked

21 citations

Marcelo D. T. Torres, Yiqian Duan, Álvaro Rodríguez del Río, Thomas Schmidt, Hui Chong +12 more

Human gut metagenomic mining reveals an untapped source of peptide antibiotics

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.31.555711

N/A

0DataRank · unranked

12 citations

Erin F. Brooks, Angela Cesaro, Hila Sberro, Cosmos Nicolaou, Ami S. Bhatt +2 more

Molecular de-extinction of antibiotics enabled by deep learning

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.01.560353

N/A

0DataRank · unranked

8 citations

Marcelo D. T. Torres, Jacqueline Peng, César de la Fuente‐Núñez, Fang Wan

Discovery of antimicrobial peptides in the global microbiome with machine learning

Cell(2024)10.1016/j.cell.2024.05.013

N/A

0DataRank · unranked

353 citations

Marcelo D. T. Torres, Yiqian Duan, Álvaro Rodríguez del Río, Thomas Schmidt, Hui Chong +12 more

Deep-learning-enabled antibiotic discovery through molecular de-extinction

Nature Biomedical Engineering(2024)10.1038/s41551-024-01201-x

N/A

0DataRank · unranked

163 citations

Marcelo D. T. Torres, Jacqueline Peng, César de la Fuente‐Núñez, Fang Wan

Mining human microbiomes reveals an untapped source of peptide antibiotics

Cell(2024)10.1016/j.cell.2024.07.027

N/A

0DataRank · unranked

147 citations

Erin F. Brooks, Angela Cesaro, Hila Sberro, Matthew O Gill, Cosmos Nicolaou +3 more

Low-Cost Biosensor Technologies for Rapid Detection of COVID-19 and Future Pandemics

ACS Nano(2024)10.1021/acsnano.3c01629

N/A

0DataRank · unranked

94 citations

Heather Lukas, Marcelo D. T. Torres, Wei Gao, César de la Fuente‐Núñez, William R. de Araújo

Computational Design of Pore-Forming Peptides with Potent Antimicrobial and Anticancer Activities

Journal of Medicinal Chemistry(2024)10.1021/acs.jmedchem.4c00912

N/A

0DataRank · unranked

21 citations

Marcelo D. T. Torres, Miroslav Boudný, Markéta Koběrská, Floriana Cappiello, Miroslav Popper +11 more

Polyproline peptide targets Klebsiella pneumoniae polysaccharides to collapse biofilms

Cell Reports Physical Science(2024)10.1016/j.xcrp.2024.101869

N/A

0DataRank · unranked

18 citations

Robert L. Beckman, Christina DeBarro, James E. Keener, Marcelo D. T. Torres, César de la Fuente‐Núñez +3 more

Antibiofilm approaches as a new paradigm for treating infections

Progress in Biomedical Engineering(2024)10.1088/2516-1091/ad1cd6

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0DataRank · unranked

5 citations

Yasser Dghoughi, Marius Colin, Marcelo D. T. Torres, César de la Fuente‐Núñez, Fany Reffuveille

Synthetic angiotensin II peptide derivatives confer protection against cerebral and severe non-cerebral malaria in murine models

Scientific Reports(2024)10.1038/s41598-024-51267-5

N/A

0DataRank · unranked

3 citations

Marcelo D. T. Torres, Leandro S. Silva, Flávio Lopes Alves, Antônio Miranda, Vani Xavier Oliveira +3 more

Design of multimodal antibiotics using deep learning

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.12.20.629780

N/A

0DataRank · unranked

5 citations

Fang Wan, Marcelo D. T. Torres, César de la Fuente‐Núñez, Angela Cesaro

Peptides from non-immune proteins target infections through antimicrobial and immunomodulatory properties

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.25.586636

N/A

0DataRank · unranked

0 citations

Angela Cesaro, César de la Fuente‐Núñez, Marcelo D. T. Torres

Computational exploration of global venoms for antimicrobial discovery with Venomics artificial intelligence

Nature Communications(2025)10.1038/s41467-025-60051-6

N/A

0DataRank · unranked

29 citations

Marcelo D. T. Torres, Sufen Li, César de la Fuente‐Núñez, Changge Guan

Generative latent diffusion language modeling yields anti-infective synthetic peptides

Cell Biomaterials(2025)10.1016/j.celbio.2025.100183

N/A

0DataRank · unranked

16 citations

Tianlai Chen, Fang Wan, Pranam Chatterjee, César de la Fuente‐Núñez, Marcelo D. T. Torres

Frog-derived synthetic peptides display anti-infective activity against Gram-negative pathogens

Trends in biotechnology(2025)10.1016/j.tibtech.2025.02.007

N/A

0DataRank · unranked

9 citations

Andreia Boaro, Angela Cesaro, Marcelo D. T. Torres, Esther Broset, César de la Fuente‐Núñez +1 more

Tailored structured peptide design with a key-cutting machine approach

Nature Machine Intelligence(2025)10.1038/s42256-025-01119-2

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0DataRank · unranked

4 citations

Marcelo D. T. Torres, Carlos A. Oliva, César de la Fuente‐Núñez, Carlos A. Brizuela, Yan Carlos Leyva

Synthetic peptides targeting a mast cell-specific G protein-coupled receptor MRGPRB2 display anti-infective potential

Cell Biomaterials(2025)10.1016/j.celbio.2025.100088

N/A

0DataRank · unranked

2 citations

Marcelo D. T. Torres, Rakesh Krishnan, César de la Fuente‐Núñez, Hydar Ali, Aetas Amponnawarat

Generative latent diffusion language modeling yields anti-infective synthetic peptides

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.31.636003

N/A

0DataRank · unranked

10 citations

Tianlai Chen, Fang Wan, Pranam Chatterjee, César de la Fuente‐Núñez, Marcelo D. T. Torres

Improving functional protein generation via foundation model-derived latent space likelihood optimization

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.07.631724

N/A

0DataRank · unranked

2 citations

Fang Wan, Marcelo D. T. Torres, César de la Fuente‐Núñez, Changge Guan

Atom-level backbone engineering preserves peptide function while enhancing stability

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.06.678421

N/A

0DataRank · unranked

2 citations

Kai Fan Cheng, Tuan A. Vu, Marcelo D. T. Torres, Stavros Zanos, Ibrahim T. Mughrabi +3 more

Key-cutting machine: A novel optimization framework for tailored protein and peptide design

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.05.631393

N/A

0DataRank · unranked

0 citations

Marcelo D. T. Torres, Carlos A. Oliva, César de la Fuente‐Núñez, Carlos A. Brizuela, Yan Carlos Leyva

Covering Multiple Objectives with a Small Set of Solutions Using Bayesian Optimization

arXiv (Cornell University)(2025)10.48550/arxiv.2501.19342

N/A

0DataRank · unranked

0 citations

Kyurae Kim, Yimeng Zeng, Haydn T. Jones, Fang Wan, Marcelo D. T. Torres +3 more

Light-Emitting Probes for Labeling Peptides

Cell Reports Physical Science(2020)10.1016/j.xcrp.2020.100257

N/A

0DataRank · unranked

12 citations

Lucía Ageitos, Marcelo D. T. Torres, Fernando H. Bartoloni, César de la Fuente‐Núñez, Andreia Boaro

Molecular response to the non-lytic peptide bac7 (1-35) triggers disruption of Klebsiella pneumoniae biofilm

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.08.669280

N/A

0DataRank · unranked

0 citations

Berta Martinez, Flor Z. Santiago, Gabriela N. Echeverria, Bruno Gonçalves Pinheiro, Marcelo D. T. Torres +8 more