Armita Nourmohammad

Cape Town HVTN Immunology Laboratory / Hutchinson Centre Research Institute of South Africa

Also affiliated with University of Washington, Yale University, Fred Hutch Cancer Center, Systems Biology Institute, Allen (United States), University of Washington Applied Physics Laboratory, Seattle University

Immunology and MicrobiologyBiochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 21 papers. Top paper: “Dynamics of B-Cell Repertoires and Emergence of Cross-Reactive Responses in COVID-19 Patients with Different Disease Severity”.

Dynamics of B-Cell Repertoires and Emergence of Cross-Reactive Responses in COVID-19 Patients with Different Disease Severity

SSRN Electronic Journal(2020)10.2139/ssrn.3751051

N/A

0.104DataRank · unranked

1 citations

Huibin Lv, Jakub Otwinowski, William S. DeWitt, Giulio Isacchini, Garrick K. Yip +10 more

Dynamics of B cell repertoires and emergence of cross-reactive responses in patients with different severities of COVID-19

Cell Reports(2021)10.1016/j.celrep.2021.109173

N/A

0DataRank · unranked

57 citations

Huibin Lv, Jakub Otwinowski, William S. DeWitt, Giulio Isacchini, Garrick K. Yip +10 more

Antigenic evolution of human influenza H3N2 neuraminidase is constrained by charge balancing

eLife(2021)10.7554/elife.72516

N/A

0DataRank · unranked

37 citations

Ruipeng Lei, Armita Nourmohammad, Nicholas C. Wu, Yiquan Wang

Antigenic evolution of human influenza H3N2 neuraminidase is constrained by charge balancing

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.10.451918

N/A

0DataRank · unranked

3 citations

Ruipeng Lei, Armita Nourmohammad, Nicholas C. Wu, Yiquan Wang

Probabilities of HIV-1 bNAb development in healthy and chronically infected individuals

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.11.499584

N/A

0DataRank · unranked

7 citations

Cosimo Lupo, Meryem S. Ercanoglu, Lutz Gieselmann, Natanael Spisak, Jan Großbach +10 more

Flexible and scalable control of T cell memory by a reversible epigenetic switch

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.31.521782

N/A

0DataRank · unranked

4 citations

Elisa C. Clark, Obinna Ukogu, Wei Yang, Riza M. Daza, Kenneth K.H. Ng +8 more

Mutual information maximization for amortized likelihood inference from sampled trajectories: MINIMALIST

Physical review. E(2022)10.1103/physreve.105.055309

N/A

0DataRank · unranked

0 citations

Natanael Spisak, Armita Nourmohammad, Thierry Mora, Aleksandra M. Walczak, Giulio Isacchini

Holographic-(V)AE: an end-to-end SO(3)-Equivariant (Variational) Autoencoder in Fourier Space

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.30.510350

N/A

0DataRank · unranked

0 citations

Michael Neal Pun, Arman Angaji, Armita Nourmohammad, Gian Marco Visani

Steering and controlling evolution — from bioengineering to fighting pathogens

Nature Reviews Genetics(2023)10.1038/s41576-023-00623-8

N/A

0DataRank · unranked

27 citations

Ville Mustonen, Armita Nourmohammad, Michael Lässig

H-Packer: Holographic Rotationally Equivariant Convolutional Neural Network for Protein Side-Chain Packing

arXiv (Cornell University)(2023)10.48550/arxiv.2311.09312

N/A

0DataRank · unranked

6 citations

William Galvin, Michael Neal Pun, Armita Nourmohammad, Gian Marco Visani

Variability in the local and global composition of human T-cell receptor repertoires during thymic development across cell types and individuals

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.25.550534

N/A

0DataRank · unranked

0 citations

Valentin Quiniou, Hélène Vantomme, Paul Stys, Encarnita Mariotti-Ferandiz, David Klatzmann +4 more

Reversible, tunable epigenetic silencing of TCF1 generates flexibility in the T cell memory decision

Immunity(2024)10.1016/j.immuni.2023.12.006

N/A

0DataRank · unranked

52 citations

Elisa C. Clark, Rajesh M. Valanparambil, Obinna Ukogu, Wei Yang, Riza M. Daza +12 more

Local and Global Variability in Developing Human T-Cell Repertoires

PRX Life(2024)10.1103/prxlife.2.013011

N/A

0DataRank · unranked

5 citations

Valentin Quiniou, Pierre Barennes, Vanessa Mhanna, Hélène Vantomme, Paul Stys +6 more

Holographic-(V)AE: An end-to-end SO(3)-equivariant (variational) autoencoder in Fourier space

Physical Review Research(2024)10.1103/physrevresearch.6.023006

N/A

0DataRank · unranked

2 citations

Michael N. Pun, Arman Angaji, Armita Nourmohammad, Gian Marco Visani

Design of high specificity binders for peptide-MHC-I complexes

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.28.625793

N/A

0DataRank · unranked

9 citations

Nathan Greenwood, Julia E. Bonzanini, Amir Motmaen, Jazmin Sharp, Chunyu Wang +6 more

HERMES: Holographic Equivariant neuRal network model for Mutational Effect and Stability prediction

arXiv (Cornell University)(2024)10.48550/arxiv.2407.06703

N/A

0DataRank · unranked

1 citations

William Galvin, Jones, Zac, Michael N. Pun, Eric Daniel, Kevin Borisiak +3 more

Loop-Diffusion: an equivariant diffusion model for designing and scoring protein loops

PubMed(2024)10.48550/arxiv.2409.18201

N/A

0DataRank · unranked

0 citations

Gian Marco Visani, Armita Nourmohammad, Kevin Borisiak

Design of high-specificity binders for peptide–MHC-I complexes

Science(2025)10.1126/science.adv0185

N/A

0DataRank · unranked

58 citations

Nathan Greenwood, Julia E. Bonzanini, Amir Motmaen, Jeremy Meyerberg, Tao Dao +12 more

T cell receptor specificity landscape revealed through de novo peptide design

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2504783122

N/A

0DataRank · unranked

12 citations

Michael N. Pun, Anastasia A. Minervina, Philip Bradley, Paul G. Thomas, Armita Nourmohammad +1 more

Major antigenic site B of human influenza H3N2 viruses has an evolving local fitness landscape

Nature Communications(2020)10.1038/s41467-020-15102-5

N/A

0DataRank · unranked

85 citations

Jakub Otwinowski, Andrew J. Thompson, Corwin M. Nycholat, Armita Nourmohammad, Ian A. Wilson +1 more

Genetic and environmental imprints on T cell receptor repertoires as predictors of graft-versus-host disease

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.64898/2025.12.23.696252

N/A

0DataRank · unranked

0 citations

Zachary Montague, Magdalena L Russell, Rachel Bender Ignacio, Terry Stevens-Ayers, Danniel Zamora +5 more