Jose Lugo-Martinez

Biochemistry, Genetics and Molecular BiologyImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 10 papers. Top paper: “Anti-herpetic tau preserves neurons via the cGAS-STING-TBK1 pathway in Alzheimer’s disease”.

Anti-herpetic tau preserves neurons via the cGAS-STING-TBK1 pathway in Alzheimer’s disease

Cell Reports(2025)10.1016/j.celrep.2024.115109

N/A

1.1DataRank · unranked

52 citations

Chaoming Zhou, J R Muñóz y Fernández, Krishnashis Chatterjee, Pururav Ramakrishna, Amanda Lin +10 more

Inferring the molecular and phenotypic impact of amino acid variants with MutPred2

Nature Communications(2020)10.1038/s41467-020-19669-x

N/A

1.0DataRank · unranked

830 citations

Jorge Urresti, Jose Lugo-Martinez, Kymberleigh A. Pagel, Guan Ning Lin, Hyun‐Jun Nam +7 more

Reconstructed signaling and regulatory networks identify potential drugs for SARS-CoV-2 infection

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.01.127589

N/A

0DataRank · unranked

6 citations

Jose Lugo-Martinez, Ye Yuan, Jessie Huang, Adam J. Hume, Ellen L. Suder +4 more

Dynamic Bayesian Networks for Integrating Multi-omics Time Series Microbiome Data

mSystems(2021)10.1128/msystems.01105-20

N/A

0DataRank · unranked

62 citations

Jose Lugo-Martinez, Natalia Bourguignon, Kalai Mathee, Betiana Lerner, Ziv Bar‐Joseph +2 more

scResolve: Recovering single cell expression profiles from multi-cellular spatial transcriptomics

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.18.572269

N/A

0DataRank · unranked

1 citations

Young Je Lee, Jose A. Ovando, Lorena Rosas, Mauricio Rojas, Ana L. Mora +3 more

scDOT: optimal transport for mapping senescent cells in spatial transcriptomics

Genome biology(2024)10.1186/s13059-024-03426-0

N/A

0DataRank · unranked

7 citations

Lorena Rosas, Timur O. Khaliullin, Peiran Jiang, Euxhen Hasanaj, José Antonio Ovando-Ricárdez +13 more

Recovering single-cell expression profiles from spatial transcriptomics with scResolve

Cell Reports Methods(2024)10.1016/j.crmeth.2024.100864

N/A

0DataRank · unranked

6 citations

Young Je Lee, José Antonio Ovando-Ricárdez, Lorena Rosas, Mauricio Rojas, Ana L. Mora +3 more

Protocol to recover single-cell gene expression profiles from spatial transcriptomics data using cluster computing

STAR Protocols(2025)10.1016/j.xpro.2025.103636

N/A

0DataRank · unranked

1 citations

Hao Chen, Jose Lugo-Martinez, Young Je Lee

Characterizing Cellular Heterogeneity and Transcriptomic Features of Senotype Using Deep Graph Representation Learning

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.01.662364

N/A

0DataRank · unranked

0 citations

Hao Cheng, Ahmed Ghobashi, Natalia Vanegas-Avendano, Chen Hu, Jesús Rodríguez +20 more

Classification in biological networks with hypergraphlet kernels

Bioinformatics(2020)10.1093/bioinformatics/btaa768

N/A

0DataRank · unranked

5 citations

Daniel Zeiberg, Thomas Gaudelet, Noël Malod-Dognin, Natasa Przulj, PREDRAG RADIVOJAC +1 more