Fitnat H. Yildiz

Biochemistry, Genetics and Molecular BiologyEnvironmental Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 26 papers. Top paper: “Secreted retropepsin-like enzymes are essential for stress tolerance and biofilm formation in Pseudomonas aeruginosa”.

Secreted retropepsin-like enzymes are essential for stress tolerance and biofilm formation in Pseudomonas aeruginosa

mBio(2025)10.1128/mbio.00872-25

N/A

0.104DataRank · unranked

1 citations

Charles Savelle, Jennifer K. Teschler, Eva López, Richard Little, Jacob G. Malone +4 more

Upregulation of virulence genes promotes Vibrio cholerae biofilm hyperinfectivity

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.1916571117

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0DataRank · unranked

87 citations

William H. DePas, Jungmi Park, Jennifer K. Teschler, Raimo Hartmann, Hannah Jeckel +5 more

Reciprocal c-di-GMP signaling: Incomplete flagellum biogenesis triggers c-di-GMP signaling pathways that promote biofilm formation

PLoS Genetics(2020)10.1371/journal.pgen.1008703

N/A

0DataRank · unranked

71 citations

David Zamorano‐Sánchez, Fernando A. Pagliai, Jin Hwan Park, Kyle A. Floyd, Calvin K. Lee +6 more

c-di-GMP inhibits LonA-dependent proteolysis of TfoY in Vibrio cholerae

PLoS Genetics(2020)10.1371/journal.pgen.1008897

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0DataRank · unranked

27 citations

Samar A. Mahmoud, Soo-Kyoung Kim, Justyne L. Ogdahl, Vincent T. Lee, Peter Chien +2 more

A tyrosine phosphoregulatory system controls exopolysaccharide biosynthesis and biofilm formation in Vibrio cholerae

PLoS Pathogens(2020)10.1371/journal.ppat.1008745

N/A

0DataRank · unranked

31 citations

Kassidy A. Hebert, Sarvind Tripathi, Praveen K. Singh, Kyle A. Floyd, Elise R. Brown +8 more

Structural dynamics of RbmA governs plasticity of Vibrio cholerae biofilms

UNC Libraries(2020)10.17615/ya08-tr17

N/A

0DataRank · unranked

0 citations

Praveen K. Singh, Alicia K. Michael, Lars E. P. Dietrich, Raimo Hartmann, Yu‐Cheng Lin +8 more

Roadmap on emerging concepts in the physical biology of bacterial biofilms: from surface sensing to community formation

Physical Biology(2021)10.1088/1478-3975/abdc0e

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0DataRank · unranked

98 citations

Jyot D. Antani, Pushkar P. Lele, Jing Chen, Beiyan Nan, Marco J. Kühn +37 more

Strategies and Approaches for Discovery of Small Molecule Disruptors of Biofilm Physiology

Molecules(2021)10.3390/molecules26154582

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0DataRank · unranked

14 citations

Rahul D. Shingare, John B. MacMillan, Fitnat H. Yildiz, Michael A. Trebino

Oxygen depletion and nitric oxide stimulate type IV MSHA pilus retraction in Vibrio cholerae via activation of the phosphodiesterase CdpA

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.20.440694

N/A

0DataRank · unranked

0 citations

Kyle A. Floyd, S. M. Zakir Hossain, Sweta Anantharaman, David T. Kysela, Yuanchen Yu +11 more

VxrB Influences Antagonism within Biofilms by Controlling Competition through Extracellular Matrix Production and Type 6 Secretion

mBio(2022)10.1128/mbio.01885-22

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0DataRank · unranked

25 citations

Eva Jiménez‐Siebert, Hannah Jeckel, Praveen K. Singh, Jin Hwan Park, Stefan Pukatzki +4 more

Host‐derived O‐glycans inhibit toxigenic conversion by a virulence‐encoding phage in Vibrio cholerae

The EMBO Journal(2022)10.15252/embj.2022111562

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0DataRank · unranked

29 citations

Julie Takagi, Abigail McShane, Jin Hwan Park, Kazuhiro Aoki, Catherine Griffin +8 more

Nitric oxide stimulates type IV MSHA pilus retraction in Vibrio cholerae via activation of the phosphodiesterase CdpA

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2108349119

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0DataRank · unranked

24 citations

Kyle A. Floyd, S. M. Zakir Hossain, Sweta Anantharaman, David T. Kysela, Miklós Zöldi +15 more

Utilizing imaging mass spectrometry to analyze microbial biofilm chemical responses to exogenous compounds

Methods in enzymology on CD-ROM/Methods in enzymology(2022)10.1016/bs.mie.2021.11.014

N/A

0DataRank · unranked

10 citations

Michael A. Trebino, Fitnat H. Yildiz, Laura M. Sanchez, Catherine S. McCaughey

The Rvv two-component regulatory system regulates biofilm formation and colonization in Vibrio cholerae

PLoS Pathogens(2023)10.1371/journal.ppat.1011415

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0DataRank · unranked

10 citations

Andrew W. Rogers, Jennifer K. Teschler, Jin Hwan Park, Michael A. Trebino, Issac Chaudry +3 more

The Rvv two-component regulatory system regulates biofilm formation and colonization in Vibrio cholerae

Maryland Shared Open Access Repository (USMAI Consortium)(2023)10.13016/m2dyvn-1un0

N/A

0DataRank · unranked

1 citations

Andrew H. Rogers, Jennifer K. Teschler, Jin Hwan Park, Michael A. Trebino, Issac Chaudry +3 more

A label-free approach for relative spatial quantitation of c-di-GMP in microbial biofilms

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.10.561783

N/A

0DataRank · unranked

1 citations

Michael A. Trebino, Allyson McAtamney, Ruth Y. Isenberg, Mark J. Mandel, Fitnat H. Yildiz +2 more

Outer membrane vesicles and the outer membrane protein OmpU govern Vibrio cholerae biofilm matrix assembly

mBio(2024)10.1128/mbio.03304-23

N/A

0DataRank · unranked

41 citations

W. Timothy Garvey, Peter Dahl, Shuaiqi Guo, Yunjie Chang, Carmen Schwechheimer +7 more

Counterclockwise rotation of the flagellum promotes biofilm initiation in Helicobacter pylori

mBio(2024)10.1128/mbio.00440-24

N/A

0DataRank · unranked

18 citations

Paphavee Lertsethtakarn, Vanessa T. Mariscal, Fitnat H. Yildiz, Karen M. Ottemann, Xiaolin Liu

A Label-Free Approach for Relative Spatial Quantitation of c-di-GMP in Microbial Biofilms

Analytical Chemistry(2024)10.1021/acs.analchem.3c04687

N/A

0DataRank · unranked

7 citations

Michael A. Trebino, Allyson McAtamney, Ruth Y. Isenberg, Mark J. Mandel, Fitnat H. Yildiz +2 more

Microbial Metabolomics’ Latest SICRIT: Soft Ionization by Chemical Reaction In-Transfer Mass Spectrometry

Journal of the American Society for Mass Spectrometry(2024)10.1021/jasms.4c00309

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0DataRank · unranked

5 citations

Allison Ferranti, Denise A. Ludvik, Fitnat H. Yildiz, Mark J. Mandel, Taylor Hayward +2 more

A pervasive large conjugative plasmid mediates multispecies biofilm formation in the intestinal microbiota increasing resilience to perturbations

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.29.590671

N/A

0DataRank · unranked

6 citations

Nathania Said, Michael J. Coyne, K. Flores, Nazik Elmekki, Madeline L. Sheahan +7 more

Microbial metabolomics’ latest SICRIT: Soft ionization by Chemical Reaction in-Transfer mass spectrometry

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.17.604007

N/A

0DataRank · unranked

0 citations

Allison Ferranti, Denise A. Ludvik, Fitnat H. Yildiz, Mark J. Mandel, Taylor Hayward +2 more

Parallel regulatory circuits orchestrate biofilm formation in response to c-di-GMP levels and growth phase

PLoS Genetics(2025)10.1371/journal.pgen.1011870

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0DataRank · unranked

2 citations

Giordan Kitts, James R. J. Haycocks, Rachel Wheat, Issac Chaudry, Jin Hwan Park +4 more

Vibrio cholerae biofilm matrix assembly and growth are shaped by a glutamate-specific TAXI/TRAP protein

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2504869122

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0DataRank · unranked

2 citations

Rino Oguchi, Steffi Jimmy, Christopher R. Evans, Kaitlin D Yarrington, James B. Winans +15 more

c-di-GMP modulates type IV MSHA pilus retraction and surface attachment in Vibrio cholerae

Nature Communications(2020)10.1038/s41467-020-15331-8

N/A

0DataRank · unranked

105 citations

Calvin K. Lee, Wujing Xian, Mahmoud Nametalla, Aneesa Valentine, Benjamin Crair +16 more

Near-atomic in-situ architecture and membrane-coupled dynamics of the Vibrio cholerae sheathed flagellum

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.64898/2025.12.02.691832

N/A

0DataRank · unranked

0 citations

Jian Yue, Jin Hwan Park, Diana Valverde-Mendez, Jack M. Botting, Rajeev Kumar +6 more