Joshua C. Vaughan

Computer ScienceMedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 21 papers. Top paper: “Versatile, do-it-yourself, low-cost spinning disk confocal microscope”.

Versatile, do-it-yourself, low-cost spinning disk confocal microscope

Biomedical Optics Express(2022)10.1364/boe.442087

N/A

1.3DataRank · unranked

32 citations

Min Yen Lee, Marco D. Howard, Marcus A. Woodworth, Philip R. Nicovich, Joshua C. Vaughan +1 more

Incorporation of sensing modalities into de novo designed fluorescence-activating proteins

Nature Communications(2021)10.1038/s41467-020-18911-w

N/A

0DataRank · unranked

51 citations

Lindsey Doyle, Justin Daho Lee, Michael Rappleye, Lauren Gagnon, Min Yen Lee +14 more

Tunable, division-independent control of gene activation timing by a polycomb switch

Cell Reports(2021)10.1016/j.celrep.2021.108888

N/A

0DataRank · unranked

34 citations

Phuc Hong Nguyen, Marcus A. Woodworth, Kenneth K.H. Ng, Blythe Irwin, Joshua C. Vaughan +2 more

Multiplexed single-cell profiling of chromatin states at genomic loci by expansion microscopy

Nucleic Acids Research(2021)10.1093/nar/gkab423

N/A

0DataRank · unranked

33 citations

Kenneth K.H. Ng, Aaron R. Halpern, Nicholas A. Pease, Phuc Hong Nguyen, Hao Yuan Kueh +2 more

Intrinsically disordered peptides enhance regenerative capacities of bone composite xenografts

Materials Today(2021)10.1016/j.mattod.2021.12.001

N/A

0DataRank · unranked

28 citations

Sabine Stötzel, Thaqif El Khassawna, Chenyi Mao, Adilijiang Ali, Joshua C. Vaughan +9 more

The Giardia lamellipodium-like ventrolateral flange supports attachment and rapid cytokinesis

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.31.429041

N/A

0DataRank · unranked

4 citations

Germain C. M. Alas, Nikita Taparia, Elizabeth Thomas, Melissa Steele-Ogus, Kelli L. Hvorecny +7 more

Prostate cancer risk stratification via non-destructive 3D pathology with annotation-free gland segmentation and analysis

medRxiv(2021)10.1101/2021.08.30.21262847

N/A

0DataRank · unranked

3 citations

Nicholas P. Reder, Can Koyuncu, Patrick Leo, Sarah Hawley, Hanhui Huang +18 more

Versatile, do-it-yourself, low-cost spinning disk confocal microscope

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.04.458950

N/A

0DataRank · unranked

1 citations

Min Yen Lee, Marco D. Howard, Marcus A. Woodworth, Philip R. Nicovich, Joshua C. Vaughan +1 more

Upregulated PD-1 signaling antagonizes glomerular health in aged kidneys and disease

Journal of Clinical Investigation(2022)10.1172/jci156250

N/A

0DataRank · unranked

78 citations

Natalya Kaverina, Yuliang Wang, Diana G. Eng, Yuting Zeng, Uyen Tran +11 more

Fluorescent labeling of abundant reactive entities (FLARE) for cleared-tissue and super-resolution microscopy

Nature Protocols(2022)10.1038/s41596-021-00667-2

N/A

0DataRank · unranked

24 citations

Chenyi Mao, Adam K. Glaser, Marcus A. Woodworth, Aaron R. Halpern, Adilijiang Ali +3 more

Multiresolution nondestructive 3D pathology of whole lymph nodes for breast cancer staging

Journal of Biomedical Optics(2022)10.1117/1.jbo.27.3.036501

N/A

0DataRank · unranked

22 citations

Adam K. Glaser, Chenyi Mao, Etsuo A. Susaki, Joshua C. Vaughan, Suzanne M. Dintzis +2 more

The Giardia ventrolateral flange is a lamellar membrane protrusion that supports attachment

PLoS Pathogens(2022)10.1371/journal.ppat.1010496

N/A

0DataRank · unranked

13 citations

Germain C. M. Alas, Nikita Taparia, Elizabeth Thomas, Melissa Steele-Ogus, Kelli L. Hvorecny +7 more

Error-Correction Method for High-Throughput Sizing of Nanoscale Vesicles with Single-Molecule Localization Microscopy

The Journal of Physical Chemistry B(2023)10.1021/acs.jpcb.2c09053

N/A

0DataRank · unranked

7 citations

James Kim, Lucia Vojtech, Joshua C. Vaughan, Daniel T. Chiu, Seung‐Ryoung Jung

An end-to-end workflow for non-destructive 3D pathology

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.03.551845

N/A

0DataRank · unranked

7 citations

Lindsey A. Barner, Qinghua Han, Elena Baraznenok, Lydia Lan, Chetan Poudel +13 more

Highly Multiplexed Fluorescence Microscopy with Spectrally Tunable Semiconducting Polymer Dots

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.05.570289

N/A

0DataRank · unranked

1 citations

Chetan Poudel, Margaret C. Sarfatis, Jiangbo Yu, Madeline Wong, Daniel T. Chiu +2 more

An end-to-end workflow for nondestructive 3D pathology

Nature Protocols(2024)10.1038/s41596-023-00934-4

N/A

0DataRank · unranked

33 citations

Lindsey A. Barner, Qinghua Han, Elena Baraznenok, Lydia Lan, Chetan Poudel +13 more

Axially swept open-top light-sheet microscopy for densely labeled clinical specimens

Optics Letters(2024)10.1364/ol.521591

N/A

0DataRank · unranked

9 citations

Lindsey A. Barner, Elena Baraznenok, Lydia Lan, Chetan Poudel, David Brenes +6 more

Highly multiplexed fluorescence microscopy with spectrally tunable semiconducting polymer dots

Science Advances(2024)10.1126/sciadv.adk8829

N/A

0DataRank · unranked

9 citations

Chetan Poudel, Margaret C. Sarfatis, Jiangbo Yu, Madeline Wong, Daniel T. Chiu +2 more

Intracellular delivery of proteins for live cell imaging

Journal of Controlled Release(2025)10.1016/j.jconrel.2025.113651

N/A

0DataRank · unranked

4 citations

Hwanhee C. Kim, Catherine Sniezek, S. A. Berger, Justin M. Kollman, David Baker +3 more

Feature-rich covalent stains for super-resolution and cleared tissue fluorescence microscopy

Science Advances(2020)10.1126/sciadv.aba4542

N/A

0DataRank · unranked

104 citations

Min Yen Lee, Jing-Ru Jhan, Aaron R. Halpern, Marcus A. Woodworth, Adam K. Glaser +7 more

Hemodynamic simulation and in vitro modeling of three-dimensional glomeruli at anatomical scale

Physics of Fluids(2025)10.1063/5.0264128

N/A

0DataRank · unranked

0 citations

Andres Armenta, Joshua C. Vaughan, Mark Terasaki, Jonathan Himmelfarb, Ying Zheng +1 more