Damian R. Plichta

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological SciencesMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 22 papers. Top paper: “Congruent microbiome signatures in fibrosis-prone autoimmune diseases: IgG4-related disease and systemic sclerosis”.

Congruent microbiome signatures in fibrosis-prone autoimmune diseases: IgG4-related disease and systemic sclerosis

Genome Medicine(2021)10.1186/s13073-021-00853-7

N/A

1.7DataRank · unranked

60 citations

Juhi Somani, Matthieu Pichaud, Zachary S. Wallace, Ana D. Fernandes, Cory A. Perugino +8 more

The CD4+ T cell response to a commensal-derived epitope transitions from a tolerant to an inflammatory state in Crohn’s disease

Immunity(2022)10.1016/j.immuni.2022.08.016

N/A

1.6DataRank · unranked

58 citations

Eric M. Brown, Damian R. Plichta, Joachim Johansen, Shaina W. Twardus, Toni Marie Delorey +6 more

Human gut microbes impact host serum metabolome and insulin sensitivity

Nature(2016)10.1038/nature18646

N/A

1.1DataRank · unranked

2114 citations

Valborg Gudmundsdottir, Henrik Bjørn Nielsen, Tuulia Hyotylainen, Trine Nielsen, Benjamin A. H. Jensen +37 more

Remodeling of colon plasma cell repertoire within ulcerative colitis patients

Journal of Experimental Medicine(2023)10.1084/jem.20220538

N/A

0.939DataRank · unranked

31 citations

Basak Eraslan, Andrew Hudak, Eric M. Brown, Dallis Sergio, Toni Marie Delorey +13 more

Cytokine-specific autoantibodies shape the gut microbiome in autoimmune polyendocrine syndrome type 1

Journal of Allergy and Clinical Immunology(2021)10.1016/j.jaci.2021.03.025

N/A

0.914DataRank · unranked

19 citations

Martta Jokinen, Damian R. Plichta, Gerhard Liebisch, Wolfram Gronwald, Katja Dettmer +6 more

Gut microbiome and metabolome profiling in Framingham heart study reveals cholesterol-metabolizing bacteria

Cell(2024)10.1016/j.cell.2024.03.014

N/A

0.816DataRank · unranked

230 citations

Martin Stražar, Ahmed M. Mohamed, Julián Ávila-Pacheco, Rebecca L. Walker, Tina Lebar +21 more

Commensal consortia decolonize Enterobacteriaceae via ecological control

Nature(2024)10.1038/s41586-024-07960-6

N/A

0.704DataRank · unranked

108 citations

Takaaki Kawaguchi, Marie‐Madlen Pust, Keiko Yasuma-Mitobe, Damian R. Plichta, Naomi Hasegawa +29 more

Alterations in Fecal Microbiomes and Serum Metabolomes of Fatigued Patients With Quiescent Inflammatory Bowel Diseases

Clinical Gastroenterology and Hepatology(2020)10.1016/j.cgh.2020.03.013

N/A

0.628DataRank · unranked

65 citations

Damian R. Plichta, Amit D. Joshi, Gracia Bonilla, Vincent Peng, Francis Colizzo +9 more

HLA-II immunopeptidome profiling and deep learning reveal features of antigenicity to inform antigen discovery

Immunity(2023)10.1016/j.immuni.2023.05.009

N/A

0.596DataRank · unranked

52 citations

Jihye Park, Jennifer G. Abelin, Hannah Taylor, Thomas K. Pedersen, Damian R. Plichta +9 more

Gut microbiome ADP-ribosyltransferases are widespread phage-encoded fitness factors

Cell Host & Microbe(2021)10.1016/j.chom.2021.07.011

N/A

0.590DataRank · unranked

50 citations

Hugo Arellano-Santoyo, Emily R. Temple, Zachary A. Costliow, Matthieu Pichaud, A. Brantley Hall +9 more

A Synthesis-Based Reverse Metabolomics Approach for the Discovery of Chemical Structures from Humans and Animals.

Research Square(2021)10.21203/rs.3.rs-820302/v1

N/A

0.464DataRank · unranked

21 citations

Emily C. Gentry, Stephanie L. Collins, Morgan Panitchpakdi, Pedro Belda‐Ferre, Allison K. Stewart +14 more

Human immunodeficiency virus and antiretroviral therapies exert distinct influences across diverse gut microbiomes

Nature Microbiology(2025)10.1038/s41564-025-02157-7

N/A

0.269DataRank · unranked

5 citations

Sambhawa Priya, Jiawu Xu, Upasana Das Adhikari, Gleb Pishchany, Ahmed M. Mohamed +13 more

Industrialization drives convergent microbial and physiological shifts in the human metaorganism

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.20.683358

N/A

0.241DataRank · unranked

4 citations

Malte Rühlemann, Ana Paula Schaan, Yue Ma, Lucas Moitinho‐Silva, Eike Matthias Wacker +61 more

Differential Impact of Smoking on Methylome and Transcriptome in Crohn’s Disease and Ulcerative Colitis

Inflammatory Bowel Diseases(2023)10.1093/ibd/izad268

N/A

0DataRank · unranked

10 citations

Damian R. Plichta, Sean Kim, I. Kim, S.A. Gregory, Yan Xia +4 more

Rationally-defined microbial consortia suppress multidrug-resistant proinflammatory Enterobacteriaceae via ecological control

Research Square(2023)10.21203/rs.3.rs-3462622/v1

N/A

0DataRank · unranked

7 citations

Munehiro Furuichi, Takaaki Kawaguchi, Marie‐Madlen Pust, Keiko Yasuma-Mitobe, Damian R. Plichta +26 more

Protein Language Models Uncover Carbohydrate-Active Enzyme Function in Metagenomics

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.23.563620

N/A

0DataRank · unranked

7 citations

Ahmed M. Mohamed, Daniel B. Graham, Róisı́n M. Owens, Sabina Leanti La Rosa, Damian R. Plichta +3 more

Multi-“-Omics” Profiling in Patients With Quiescent Inflammatory Bowel Disease Identifies Biomarkers Predicting Relapse

Inflammatory Bowel Diseases(2020)10.1093/ibd/izaa183

N/A

0DataRank · unranked

54 citations

Damian R. Plichta, Amit D. Joshi, Gracia Bonilla, Ruslan I. Sadreyev, Hera Vlamakis +3 more

Cholesterol Metabolism by Uncultured Human Gut Bacteria Influences Host Cholesterol Level

Cell Host & Microbe(2020)10.1016/j.chom.2020.05.013

N/A

0DataRank · unranked

309 citations

Damian R. Plichta, Dmitry Shungin, Nitzan Koppel, A. Brantley Hall, Beverly Fu +6 more

Identification of specific microbiota members that induce beige fat biogenesis in response to dietary cues

Research Square(2024)10.21203/rs.3.rs-5454144/v1

N/A

0DataRank · unranked

0 citations

Takeshi Tanoue, Manabu Nagayama, Ayumi Roochana, Samuel Zimmerman, Orr Ashenberg +25 more

Association of distinct microbial signatures with premalignant colorectal adenomas

Cell Host & Microbe(2023)10.1016/j.chom.2023.04.007

N/A

0DataRank · unranked

46 citations

Damian R. Plichta, Shreya Asher, Marisa DelSignore, Tiffany Jeong, Jessica McGoldrick +5 more

Protein language models uncover carbohydrate-active enzyme function in metagenomics

BMC Bioinformatics(2025)10.1186/s12859-025-06286-y

N/A

0DataRank · unranked

4 citations

Ahmed M. Mohamed, Chenhao Li, Tommi Vatanen, D. B. Graham, Róisı́n M. Owens +5 more

Multi-omics reveal microbial determinants impacting responses to biologic therapies in inflammatory bowel disease

Cell Host & Microbe(2021)10.1016/j.chom.2021.06.019

N/A

0DataRank · unranked

220 citations

Damian R. Plichta, Larson Hogstrom, Nienke Z. Borren, Helena Lau, Sara Gregory +7 more