Daniel Petras

Also affiliated with Innovation Cluster (Canada), University of Tübingen

Biochemistry, Genetics and Molecular BiologyEngineeringMedicineChemistry

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

7.6Author DataRank

Indexed papers

4in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Standardized multi-omics of Earth’s microbiomes reveals microbial and metabolite diversity

Nature Microbiology(2022)10.1038/s41564-022-01266-x

Top 7%

3.0DataRank

Top 7%191 citations

Louis‐Félix Nothias, Luke Thompson, Jon G. Sanders, Rodolfo A. Salido, Sneha Couvillion +89 more

Papers

Driven by 54 papers — median percentile 88. Top paper: “Feature-based molecular networking in the GNPS analysis environment”.

Feature-based molecular networking in the GNPS analysis environment

Nature Methods(2020)10.1038/s41592-020-0933-6

N/A

10.9DataRank · unranked

1581 citations

Daniel Petras, Robin Schmid, Kai Dührkop, Johannes Rainer, Abinesh Sarvepalli +57 more

Systematic classification of unknown metabolites using high-resolution fragmentation mass spectra

Nature Biotechnology(2020)10.1038/s41587-020-0740-8

N/A

5.0DataRank · unranked

840 citations

Louis‐Félix Nothias, Markus Fleischauer, Raphael Reher, Marcus Ludwig, Martin Hoffmann +6 more

Standardized multi-omics of Earth’s microbiomes reveals microbial and metabolite diversity

Nature Microbiology(2022)10.1038/s41564-022-01266-x

Top 7%

3.0DataRank

Top 7%191 citations

Louis‐Félix Nothias, Luke Thompson, Jon G. Sanders, Rodolfo A. Salido, Sneha Couvillion +89 more

A community resource for paired genomic and metabolomic data mining

Nature Chemical Biology(2021)10.1038/s41589-020-00724-z

Top 9%

2.5DataRank

Top 9%131 citations

Stefan Verhoeven, Lars Ridder, Florian Huber, Deepa Acharya, Alexander A. Aksenov +95 more

Open access repository-scale propagated nearest neighbor suspect spectral library for untargeted metabolomics

Nature Communications(2023)10.1038/s41467-023-44035-y

Top 15%

1.4DataRank

Top 15%82 citations

Nicole E. Avalon, Sydney P. Thomas, Sarvar A. Kakhkhorov, Alexander A. Aksenov, Paulo Wender Portal Gomes +27 more

Reproducible molecular networking of untargeted mass spectrometry data using GNPS

Nature Protocols(2020)10.1038/s41596-020-0317-5

N/A

0.977DataRank · unranked

673 citations

Emily C. Gentry, Kerry L. McPhail, Louis‐Félix Nothias, Mélissa Nothias-Esposito, Amina Bouslimani +37 more

Open Access Repository-Scale Propagated Nearest Neighbor Suspect Spectral Library for Untargeted Metabolomics

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.15.490691

Top 33%

0.597DataRank

Top 33%28 citations

Nicole E. Avalon, Sydney P. Thomas, Sarvar A. Kakhkhorov, Alexander A. Aksenov, Paulo Wender Portal Gomes +27 more

Siderophore-mediated zinc acquisition enhances enterobacterial colonization of the inflamed gut

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.20.212498

N/A

0DataRank · unranked

4 citations

Judith Behnsen, Allegra T. Aron, Subramanian Vivekanandan, Janet Z. Liu, Romana R. Gerner +19 more

The ant fungus garden acts as an external digestive system

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.18.389361

N/A

0DataRank · unranked

0 citations

Sara P. Puckett, Kathleen E. Kyle, Daniel Petras, Ricardo Silva, Louis‐Félix Nothias +8 more

Ion identity molecular networking for mass spectrometry-based metabolomics in the GNPS environment

Nature Communications(2021)10.1038/s41467-021-23953-9

N/A

0DataRank · unranked

325 citations

Daniel Petras, Louis‐Félix Nothias, Mingxun Wang, Allegra T. Aron, Annika Jagels +40 more

GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser

Nature Methods(2021)10.1038/s41592-021-01339-5

N/A

0DataRank · unranked

95 citations

Vanessa V. Phelan, Deepa Acharya, Andrew E. Allen, Allegra T. Aron, Nuno Bandeira +30 more

Siderophore-mediated zinc acquisition enhances enterobacterial colonization of the inflamed gut

Nature Communications(2021)10.1038/s41467-021-27297-2

N/A

0DataRank · unranked

95 citations

Hui Zhi, Allegra T. Aron, Subramanian Vivekanandan, William Santus, Michael H. Lee +21 more

Chemical interplay and complementary adaptative strategies toggle bacterial antagonism and co-existence

Cell Reports(2021)10.1016/j.celrep.2021.109449

N/A

0DataRank · unranked

51 citations

David Vela‐Corcía, Daniel Petras, Luis Díaz‐Martínez, Alicia Isabel Pérez‐Lorente, Sara Sopeña‐Torres +6 more

Non-targeted tandem mass spectrometry enables the visualization of organic matter chemotype shifts in coastal seawater

Chemosphere(2021)10.1016/j.chemosphere.2020.129450

N/A

0DataRank · unranked

65 citations

Jeremiah J. Minich, Lucía Cancelada, Ralph R. Torres, Emily Kunselman, Mingxun Wang +6 more

Chemical Proportionality within Molecular Networks

Analytical Chemistry(2021)10.1021/acs.analchem.1c01520

N/A

0DataRank · unranked

36 citations

Andrés Mauricio Caraballo‐Rodríguez, Alan K. Jarmusch, Carlos Molina‐Santiago, Julia M. Gauglitz, Emily C. Gentry +6 more

Chemical Gradients of Plant Substrates in an Atta texana Fungus Garden

mSystems(2021)10.1128/msystems.00601-21

N/A

0DataRank · unranked

6 citations

Sara P. Puckett, Kathleen E. Kyle, Daniel Petras, Ricardo Silva, Louis‐Félix Nothias +8 more

GNPS Dashboard: Collaborative Analysis of Mass Spectrometry Data in the Web Browser

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.05.438475

N/A

0DataRank · unranked

13 citations

Vanessa V. Phelan, Deepa Acharya, Andrew E. Allen, Allegra T. Aron, Nuno Bandeira +30 more

Chemical interplay and complementary adaptative strategies toggle bacterial antagonism and co-existence

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.11.426172

N/A

0DataRank · unranked

8 citations

David Vela‐Corcía, Daniel Petras, Luis Díaz‐Martínez, Alicia Isabel Pérez‐Lorente, Sara Sopeña‐Torres +6 more

Multi-omics profiling of Earth’s biomes reveals patterns of diversity and co-occurrence in microbial and metabolite composition across environments

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.04.446988

N/A

0DataRank · unranked

8 citations

Louis‐Félix Nothias, Luke Thompson, Jon G. Sanders, Rodolfo A. Salido, Sneha Couvillion +45 more

Native Metabolomics Identifies the Rivulariapeptolide Family of Protease Inhibitors

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.03.458897

N/A

0DataRank · unranked

8 citations

Allegra T. Aron, Pavla Fajtová, Paolo Stincone, Chenxi Liu, Ido Ben‐Shalom +12 more

Mutualistic interactions between B. subtilis and seeds dictate plant development

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.07.447311

N/A

0DataRank · unranked

1 citations

Carlos Molina‐Santiago, Andrés Mauricio Caraballo‐Rodríguez, Daniel Petras, Luis Díaz‐Martínez, Alejandro Pérez‐García +4 more

Chemical Proportionality within Molecular Networks

ChemRxiv(2021)10.26434/chemrxiv.14396105.v1

N/A

0DataRank · unranked

1 citations

Andrés Mauricio Caraballo‐Rodríguez, Alan K. Jarmusch, Carlos Molina‐Santiago, Julia M. Gauglitz, Emily C. Gentry +6 more

Chemical Proportionality within Molecular Networks

ChemRxiv(2021)10.26434/chemrxiv.14396105

N/A

0DataRank · unranked

0 citations

Andrés Mauricio Caraballo‐Rodríguez, Alan K. Jarmusch, Carlos Molina‐Santiago, Julia M. Gauglitz, Emily C. Gentry +6 more

Native metabolomics identifies the rivulariapeptolide family of protease inhibitors

Nature Communications(2022)10.1038/s41467-022-32016-6

N/A

0DataRank · unranked

47 citations

Allegra T. Aron, Pavla Fajtová, Paolo Stincone, Berenike Wagner, Alicia Isabel Pérez‐Lorente +23 more

Illuminating the dark metabolome of Pseudo‐nitzschia –microbiome associations

Environmental Microbiology(2022)10.1111/1462-2920.16242

N/A

0DataRank · unranked

24 citations

Zachary A. Quinlan, Louis‐Félix Nothias, Margot E. White, Ariel Rabines, Daniel Petras +9 more

ConCISE: Consensus Annotation Propagation of Ion Features in Untargeted Tandem Mass Spectrometry Combining Molecular Networking and In Silico Metabolite Structure Prediction

Metabolites(2022)10.3390/metabo12121275

N/A

0DataRank · unranked

21 citations

Irina Koester, Allegra T. Aron, Daniel Petras, Lihini I. Aluwihare, Pieter C. Dorrestein +3 more

Metabolomics Spatial Survey of Modern Stromatolites from South Africa and Characterization of Ibhayipeptolides

ChemRxiv(2022)10.26434/chemrxiv-2022-1vr86

N/A

0DataRank · unranked

2 citations

Allegra T. Aron, Eric W. Isemonger, Daniel Petras, Samantha C. Waterworth, Emily C. Gentry +9 more

Integrative analysis of multimodal mass spectrometry data in MZmine 3

Nature Biotechnology(2023)10.1038/s41587-023-01690-2

N/A

0DataRank · unranked

1161 citations

Steffen Heuckeroth, Ansgar Korf, Aleksandr Smirnov, Owen D. Myers, Thomas Sparholt Dyrlund +37 more

Microbiomes and metabolomes of dominant coral reef primary producers illustrate a potential role for immunolipids in marine symbioses

Communications Biology(2023)10.1038/s42003-023-05230-1

N/A

0DataRank · unranked

31 citations

Sean O. I. Swift, Kirsten K. Nakayama, Christopher B. Wall, Emily C. Gentry, Morgan Panitchpakdi +21 more

Portosystemic shunt placement reveals blood signatures for the development of hepatic encephalopathy through mass spectrometry

Nature Communications(2023)10.1038/s41467-023-40741-9

N/A

0DataRank · unranked

19 citations

Stephany Flores Ramos, Julia M. Gauglitz, Anne-Marie Fassler, Daniel Petras, Alexander A. Aksenov +10 more

The Hitchhiker’s Guide to Statistical Analysis of Feature-based Molecular Networks from Non-Targeted Metabolomics Data

Socio-Environmental Systems Modeling(2023)10.26434/chemrxiv-2023-wwbt0

N/A

0DataRank · unranked

15 citations

Axel Walter, Filip Ottosson, Francesco Russo, Marcelo Navarro-Díaz, Judith Boldt +52 more

Mass spectrometry data processing in MZmine 3: feature detection and annotation

Socio-Environmental Systems Modeling(2023)10.26434/chemrxiv-2023-98n6q

N/A

0DataRank · unranked

12 citations

Steffen Heuckeroth, Aleksandr Smirnov, Olena Mokshyna, Corinna Brungs, Ansgar Korf +14 more

A Taxonomically-informed Mass Spectrometry Search Tool for Microbial Metabolomics Data

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.20.549584

N/A

0DataRank · unranked

5 citations

Robin Schmid, Anelize Bauermeister, Paulo Wender Portal Gomes, Andrés Mauricio Caraballo‐Rodríguez, Yasin El Abiead +95 more

A Taxonomically-informed Mass Spectrometry Search Tool for Microbial Metabolomics Data

Research Square(2023)10.21203/rs.3.rs-3189768/v1

N/A

0DataRank · unranked

4 citations

Simone Zuffa, Robin Schmid, Anelize Bauermeister, Paulo Wender Portal Gomes, Andrés Mauricio Caraballo‐Rodríguez +95 more

Pre- and Post-Portosystemic Shunt Placement Metabolomics Reveal Molecular Signatures for the Development of Hepatic Encephalopathy

medRxiv(2023)10.1101/2023.01.02.22281374

N/A

0DataRank · unranked

1 citations

Stephany Flores Ramos, Julia M. Gauglitz, Anne‐Marie Carpenter, Daniel Petras, Alexander A. Aksenov +10 more

Reproducible mass spectrometry data processing and compound annotation in MZmine 3

Nature Protocols(2024)10.1038/s41596-024-00996-y

N/A

0DataRank · unranked

153 citations

Tito Damiani, Aleksandr Smirnov, Olena Mokshyna, Corinna Brungs, Ansgar Korf +14 more

microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data

Nature Microbiology(2024)10.1038/s41564-023-01575-9

N/A

0DataRank · unranked

118 citations

Robin Schmid, Anelize Bauermeister, Paulo Wender Portal Gomes, Andrés Mauricio Caraballo‐Rodríguez, Yasin El Abiead +95 more

Connecting metabolome and phenotype: recent advances in functional metabolomics tools for the identification of bioactive natural products

Natural Product Reports(2024)10.1039/d3np00050h

N/A

0DataRank · unranked

50 citations

Christian Geibel, Vidit Minda, Mingxun Wang, Allegra T. Aron, Daniel Petras +1 more

Leptochelins A–C, Cytotoxic Metallophores Produced by Geographically Dispersed Leptothoe Strains of Marine Cyanobacteria

Journal of the American Chemical Society(2024)10.1021/jacs.4c05399

N/A

0DataRank · unranked

27 citations

Mariana Reis, Christopher C. Thornburg, R. Thomas Williamson, Daniel Petras, Allegra T. Aron +25 more

ModiFinder: Tandem Mass Spectral Alignment Enables Structural Modification Site Localization

Journal of the American Society for Mass Spectrometry(2024)10.1021/jasms.4c00061

N/A

0DataRank · unranked

18 citations

Michael Strobel, Giovanni Andrea Vitale, Christian Geibel, Yasin El Abiead, Neha Garg +7 more

Environmental metabolomics characterization of modern stromatolites and annotation of ibhayipeptolides

PLoS ONE(2024)10.1371/journal.pone.0303273

N/A

0DataRank · unranked

4 citations

Allegra T. Aron, Eric W. Isemonger, Daniel Petras, Samantha C. Waterworth, Luthando S. Madonsela +11 more

Reproducible mass spectrometry data processing and compound annotation in MZmine 3

ChemRxiv(2024)10.26434/chemrxiv-2023-98n6q-v2

N/A

0DataRank · unranked

5 citations

Steffen Heuckeroth, Aleksandr Smirnov, Olena Mokshyna, Corinna Brungs, Ansgar Korf +14 more

Environmental metabolomics characterization of modern stromatolites and annotation of ibhayipeptolides

ChemRxiv(2024)10.26434/chemrxiv-2022-1vr86-v2

N/A

0DataRank · unranked

2 citations

Allegra T. Aron, Eric W. Isemonger, Daniel Petras, Samantha C. Waterworth, Luthando S. Madonsela +11 more

Leptochelins A-C, Cytotoxic Metallophores Produced by Geographically Dispersed Leptothoe Strains of Marine Cyanobacteria

ChemRxiv(2024)10.26434/chemrxiv-2024-nhrn8

N/A

0DataRank · unranked

0 citations

Mariana Reis, Christopher C. Thornburg, Edward C. Sherer, Daniel Petras, Allegra T. Aron +25 more

A universal language for finding mass spectrometry data patterns

Nature Methods(2025)10.1038/s41592-025-02660-z

N/A

0DataRank · unranked

49 citations

Alan K. Jarmusch, Allegra T. Aron, Daniel Petras, Vanessa V. Phelan, Haoqi Nina Zhao +69 more

Fatuamide A, a Hybrid PKS/NRPS Metallophore from a Leptolyngbya sp. Marine Cyanobacterium Collected in American Samoa

Journal of Natural Products(2025)10.1021/acs.jnatprod.4c01051

N/A

0DataRank · unranked

8 citations

C. Benjamin Naman, Arihiro Iwasaki, Alfonso Mangoni, Tiago Leão, Raphael Reher +11 more

A review of the venom microbiome and its utility in ecology and evolution including future directions for emerging research

Symbiosis(2025)10.1007/s13199-024-01031-0

N/A

0DataRank · unranked

7 citations

Eduardo Gonçalves Paterson Fox, Sara J. Dunaj, Ronald A. Jenner, Carl N. Keiser, Jason Macrander +12 more

Enhancing tandem mass spectrometry-based metabolite annotation with online chemical labeling

Nature Communications(2025)10.1038/s41467-025-61240-z

N/A

0DataRank · unranked

4 citations

Shu-Ning Xia, Kai Dührkop, Mohammad Reza Zare Shahneh, Heike Brötz‐Oesterhelt, Yvonne Mast +7 more

Auto-deconvolution and molecular networking of gas chromatography–mass spectrometry data

Nature Biotechnology(2020)10.1038/s41587-020-0700-3

N/A

0DataRank · unranked

164 citations

Ivan Laponogov, Zheng Zhang, Sophie Doran, Ilaria Belluomo, Dennis A. Veselkov +65 more

ReDU: a framework to find and reanalyze public mass spectrometry data

Nature Methods(2020)10.1038/s41592-020-0916-7

N/A

0DataRank · unranked

141 citations

Mingxun Wang, Christine M. Aceves, Rohit S. Advani, Shaden Aguirre, Alexander A. Aksenov +39 more

Mass spectrometry searches using MASST

Nature Biotechnology(2020)10.1038/s41587-019-0375-9

N/A

0DataRank · unranked

298 citations

Alan K. Jarmusch, Fernando Vargas, Alexander A. Aksenov, Julia M. Gauglitz, Kelly C. Weldon +31 more

Fungal–bacterial interaction selects for quorum sensing mutants with increased production of natural antifungal compounds

Communications Biology(2020)10.1038/s42003-020-01342-0

N/A

0DataRank · unranked

42 citations

Daniel Petras, Romina A. Tobares, Alexander A. Aksenov, Mingxun Wang, Florencia Juncosa +5 more

Multiomics Analysis Provides Insight into the Laboratory Evolution of Escherichia coli toward the Metabolic Usage of Fluorinated Indoles

ACS Central Science(2020)10.1021/acscentsci.0c00679

N/A

0DataRank · unranked

47 citations

Ludwig Sinn, Daniel Petras, Christian J. Schipp, Vladimir Kubyshkin, A. Berger +5 more

Ion Identity Molecular Networking in the GNPS Environment

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.11.088948

N/A

0DataRank · unranked

23 citations

Daniel Petras, Louis‐Félix Nothias, Mingxun Wang, Allegra T. Aron, Annika Jagels +40 more

Daniel Petras

Indexed papers

Top data-sharing exemplar

Papers