Stefan Niemann

Centre National de la Recherche Scientifique

Also affiliated with École Pratique des Hautes Études, University of Konstanz, Université Paris Sciences et Lettres, Institut de Systématique, Évolution, Biodiversité, German Center for Infection Research, Research Center Borstel - Leibniz Lung Center, Phylogeny (United States)

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile

0.648Author DataRank

Indexed papers

3in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Use of High-Resolution Geospatial and Genomic Data to Characterize Recent Tuberculosis Transmission, Botswana

Emerging infectious diseases(2023)10.3201/eid2905.220796

Top 36%

0.544DataRank

Top 36%12 citations

Ivan Barilar, Leonardo Silva de Araujo, Anne W. Rimoin, Daniel M. Parker, Rosanna Boyd +11 more

Papers

Driven by 20 papers — median percentile 22. Top paper: “Back-to-Africa introductions of Mycobacterium tuberculosis as the main cause of tuberculosis in Dar es Salaam, Tanzania”.

Back-to-Africa introductions of Mycobacterium tuberculosis as the main cause of tuberculosis in Dar es Salaam, Tanzania

PLoS Pathogens(2023)10.1371/journal.ppat.1010893

N/A

0.551DataRank · unranked

27 citations

Liliana K. Rutaihwa, Etthel M. Windels, Jerry Hella, Fabrizio Menardo, Mohamed Sasamalo +39 more

Use of High-Resolution Geospatial and Genomic Data to Characterize Recent Tuberculosis Transmission, Botswana

Emerging infectious diseases(2023)10.3201/eid2905.220796

Top 36%

0.544DataRank

Top 36%12 citations

Ivan Barilar, Leonardo Silva de Araujo, Anne W. Rimoin, Daniel M. Parker, Rosanna Boyd +11 more

The role of epistasis in amikacin, kanamycin, bedaquiline, and clofazimine resistance in Mycobacterium tuberculosis complex

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.07.443178

N/A

0.454DataRank · unranked

6 citations

Luca Freschi, Andrea Spitaleri, Sabira Tahseen, Ivan Barilar, Stefan Niemann +5 more

Genomic population structure, antimicrobial susceptibility, and clinical features of Mycobacterium xenopi isolates, Frankfurt, Germany, 1995–2020

Journal of Clinical Microbiology(2026)10.1128/jcm.01511-25

Top 78%

0.104DataRank

Top 78%1 citations

Lisa Marschall, Teodora Biciusca, Ann-Sophie Zielbauer, Max Kevane-Campbell, Martin Kuhns +5 more

Updating the approaches to define susceptibility and resistance to anti-tuberculosis agents: implications for diagnosis and treatment

European Respiratory Journal(2022)10.1183/13993003.00166-2022

N/A

0DataRank · unranked

35 citations

Sophia B. Georghiou, Timothy C. Rodwell, Alexei Korobitsyn, Said Abbadi, Kanchan Ajbani +95 more

Whole genome sequencing-based drug resistance predictions of multidrug-resistant Mycobacterium tuberculosis isolates from Tanzania

JAC-Antimicrobial Resistance(2022)10.1093/jacamr/dlac042

N/A

0DataRank · unranked

13 citations

Christian Utpatel, Elingarami Sauli, Emmanuel Mpolya, Beatrice Mutayoba, Ivan Barilar +13 more

Using genetic data to identify transmission risk factors: Statistical assessment and application to tuberculosis transmission

PLoS Computational Biology(2022)10.1371/journal.pcbi.1010696

N/A

0DataRank · unranked

12 citations

Damon Bayer, Ivan Barilar, Balladiah Kizito, Ogopotse Matsiri, Chawangwa Modongo +5 more

Host-pathogen sympatry and differential transmissibility of Mycobacterium tuberculosis complex

medRxiv(2022)10.1101/2022.08.04.22278337

N/A

0DataRank · unranked

3 citations

Francy J. Pérez-Llanos, Roland Diel, Roger Vargas, Vincent Escuyer, Kimberlee A. Musser +13 more

Back-to-Africa introductions of Mycobacterium tuberculosis as the main cause of tuberculosis in Dar es Salaam, Tanzania

medRxiv(2022)10.1101/2022.09.29.22280296

N/A

0DataRank · unranked

1 citations

Liliana K. Rutaihwa, Etthel M. Windels, Jerry Hella, Fabrizio Menardo, Mohamed Sasamalo +37 more

High-resolution characterization of recent tuberculosis transmission in Botswana using geospatial and genomic data – the Kopanyo Study

medRxiv(2022)10.1101/2022.04.13.22273731

Top 100%

0DataRank

Top 100%0 citations

Ivan Barilar, Leonardo Silva de Araujo, Anne W. Rimoin, Daniel M. Parker, Rosanna Boyd +11 more

Clinical implications of molecular drug resistance testing for Mycobacterium tuberculosis: a 2023 TBnet/RESIST-TB consensus statement

The Lancet Infectious Diseases(2023)10.1016/s1473-3099(22)00875-1

N/A

0DataRank · unranked

88 citations

Martin J. Boeree, Emmanuelle Cambau, Dumitru Chesov, Francesca Conradie, Vivian Cox +23 more

The effect of M. tuberculosis lineage on clinical phenotype

PLOS Global Public Health(2023)10.1371/journal.pgph.0001788

N/A

0DataRank · unranked

26 citations

Ronald B. Geskus, Yanlin Zhao, Luigi Ruffo Codecasa, Daniela María Cirillo, Reinout van Crevel +19 more

Quantitative measurement of antibiotic resistance in Mycobacterium tuberculosis reveals genetic determinants of resistance and susceptibility in a target gene approach

Nature Communications(2024)10.1038/s41467-023-44325-5

N/A

0DataRank · unranked

46 citations

Simone Battaglia, Emanuele Borroni, Angela Pires Brandão, Alice Brankin, Andrea Maurizio Cabibbe +95 more

A composite reference standard is needed for bedaquiline antimicrobial susceptibility testing forMycobacterium tuberculosiscomplex

European Respiratory Journal(2024)10.1183/13993003.00391-2024

N/A

0DataRank · unranked

15 citations

Paolo Miotto, Nabila Ismail, Richard Anthony, Christian Utpatel, Matthias Merker +11 more

Rapid Diagnostic Sequencing of Stool DNA Using Targeted Nanopore Sequencing in Patients With a Pulmonary Tuberculosis Diagnosis

Open Forum Infectious Diseases(2025)10.1093/ofid/ofaf121

N/A

0DataRank · unranked

3 citations

Nontobeko Maphalala, Wethusonkhe Khumalo, Doctor Busizwe Sibandze, Abigail Seeger, Maia Madison +15 more

HIV status is not associated with SARS-CoV-2 viral load and longer duration of infection among people with well-controlled HIV and high COVID-19 vaccine coverage

International Journal of Infectious Diseases(2025)10.1016/j.ijid.2025.108142

N/A

0DataRank · unranked

1 citations

Mohammad Eghbal Heidari, Balladiah Kizito, Monamodi Kesamang, Tebogo Matila, Maitshwarelo Matsheka +4 more

HIV status is not associated with SARS-CoV-2 viral load and longer duration of infection among people with well-controlled HIV and high COVID-19 vaccine coverage

medRxiv(2025)10.1101/2025.05.11.25327398

N/A

0DataRank · unranked

0 citations

Mohammad Eghbal Heidari, Balladiah Kizito, Monamodi Kesamang, Tebogo Matila, Maitshwarelo Matsheka +4 more

Role of Epistasis in Amikacin, Kanamycin, Bedaquiline, and Clofazimine Resistance in Mycobacterium tuberculosis Complex

Antimicrobial Agents and Chemotherapy(2021)10.1128/aac.01164-21

N/A

0DataRank · unranked

71 citations

Luca Freschi, Andrea Spitaleri, Sabira Tahseen, Ivan Barilar, Stefan Niemann +5 more

Transmission of pre-XDR and XDR-TB in the Mumbai Metropolitan Region, India

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.02.429364

N/A

0DataRank · unranked

3 citations

Ayan Mandal, Prachi Dev, Matthias Merker, Ivan Barilar, Christian Utpatel +6 more

Rapid molecular diagnostics of tuberculosis resistance by targeted stool sequencing

Genome Medicine(2022)10.1186/s13073-022-01054-6

N/A

0DataRank · unranked

62 citations

Alexander Kay, Viola Dreyer, Welile Sikhondze, Qiniso Dlamini, Andrew R. DiNardo +16 more

Stefan Niemann

Indexed papers

Top data-sharing exemplar

Papers