Brian J. Haas

Agricultural and Biological SciencesBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

20.4Author DataRank

Indexed papers

3in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A framework for human microbiome research

Nature(2012)10.1038/nature11209

Top 2%

8.4DataRank

Top 2%2766 citations

Barbara A. Methé, William Nelson, Mihai Pop, Heather H. Creasy, Michelle Giglio +236 more

Papers

Driven by 26 papers — median percentile 97. Top paper: “A framework for human microbiome research”.

A framework for human microbiome research

Nature(2012)10.1038/nature11209

Top 2%

8.4DataRank

Top 2%2766 citations

Barbara A. Methé, William Nelson, Mihai Pop, Heather H. Creasy, Michelle Giglio +236 more

Next-generation characterization of the Cancer Cell Line Encyclopedia

Nature(2019)10.1038/s41586-019-1186-3

Top 3%

6.8DataRank

Top 3%3735 citations

Franklin W. Huang, Gregory V. Kryukov, E. Robert McDonald, Jordi Barretina, Ellen T. Gelfand +68 more

A Tissue-Mapped Axolotl De Novo Transcriptome Enables Identification of Limb Regeneration Factors

Cell Reports(2017)10.1016/j.celrep.2016.12.063

Top 4%

5.2DataRank

Top 4%1118 citations

Kimberly Johnson, Tia DiTommaso, Matthew Brian Couger, Duygu Payzin-Dogru, Tae J. Lee +21 more

Opposing immune and genetic mechanisms shape oncogenic programs in synovial sarcoma

Nature Medicine(2021)10.1038/s41591-020-01212-6

N/A

3.5DataRank · unranked

127 citations

Cyril Neftel, Marni E. Shore, Hannah R. Weisman, Nathan D. Mathewson, Matthew J. McBride +50 more

Full-length transcriptome assembly from RNA-Seq data without a reference genome

Nature Biotechnology(2011)10.1038/nbt.1883

N/A

1.5DataRank · unranked

22458 citations

Brian J. Haas, Moran Yassour, Joshua Z. Levin, Ido Amit, Xian Adiconis +19 more

Structure, function and diversity of the healthy human microbiome

Nature(2012)10.1038/nature11234

N/A

1.4DataRank · unranked

10088 citations

Curtis Huttenhower, Dirk Gevers, Rob Knight, Sahar Abubucker, Jonathan H. Badger +235 more

Gene Fusions Create Partner and Collateral Dependencies Essential to Cancer Cell Survival

Cancer Research(2021)10.1158/0008-5472.can-21-0791

N/A

1.0DataRank · unranked

27 citations

Bo Kyung A. Seong, Jett Crowdis, Jake R. Conway, Neekesh V. Dharia, Saif Alimohamed +17 more

Single-cell RNA-seq reveals changes in cell cycle and differentiation programs upon aging of hematopoietic stem cells

Genome Research(2015)10.1101/gr.192237.115

N/A

1.0DataRank · unranked

861 citations

Itay Tirosh, Dirk Heckl, Tata Nageswara Rao, Atray Dixit, Brian J. Haas +5 more

The neuropeptide NMU amplifies ILC2-driven allergic lung inflammation

Nature(2017)10.1038/nature24029

N/A

0.966DataRank · unranked

625 citations

Samantha J. Riesenfeld, Patrick R. Burkett, Raja-Elie E. Abdulnour, Jackson Nyman, Danielle Dionne +18 more

Comparative Functional Genomics of the Fission Yeasts

Science(2011)10.1126/science.1203357

N/A

0.940DataRank · unranked

524 citations

Zehua Chen, Moran Yassour, Brian J. Haas, Naomi Habib, Ilan Wapinski +64 more

STAR-Fusion: Fast and Accurate Fusion Transcript Detection from RNA-Seq

bioRxiv (Cold Spring Harbor Laboratory)(2017)10.1101/120295

N/A

0.852DataRank · unranked

292 citations

Nicolas Stransky, Bo Li, Xiao Yang, Asma Bankapur, Carrie Ganote +10 more

Erratum: The neuropeptide NMU amplifies ILC2-driven allergic lung inflammation

Nature(2017)10.1038/nature24480

N/A

0.792DataRank · unranked

20 citations

Samantha J. Riesenfeld, Patrick R. Burkett, Raja-Elie E. Abdulnour, Jackson Nyman, Danielle Dionne +18 more

A community challenge to evaluate RNA-seq, fusion detection, and isoform quantification methods for cancer discovery

Cell Systems(2021)10.1016/j.cels.2021.05.021

N/A

0.564DataRank · unranked

42 citations

David Haan, Kristen D. Dang, Kami Chiotti, Matthew Inkman, Andrew Lamb +32 more

Targeted in silico characterization of fusion transcripts in tumor and normal tissues via FusionInspector

Cell Reports Methods(2023)10.1016/j.crmeth.2023.100467

N/A

0.524DataRank · unranked

32 citations

Alexander Dobin, Mahmoud Ghandi, Anne Van Arsdale, Timothy L. Tickle, James Robinson +4 more

Structure and transcription of integrated HPV DNA in vulvar carcinomas

npj Genomic Medicine(2024)10.1038/s41525-024-00418-8

N/A

0.330DataRank · unranked

8 citations

Lauren Turker, Yoke‐Chen Chang, Joshua Gould, Bryan Harmon, Elaine C. Maggi +11 more

Adrenergic signaling coordinates distant and local responses to amputation in axolotl

Cell(2025)10.1016/j.cell.2025.09.025

N/A

0.269DataRank · unranked

5 citations

Tim Froitzheim, Steven J. Blair, Siddhartha G. Jena, Hani D. Singer, Julia C. Paoli +33 more

TD2: finding protein coding regions in transcripts

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.13.648579

N/A

0.269DataRank · unranked

5 citations

Hyun Joo Ji, Brian J. Haas, Steven L. Salzberg, Markus J. Sommer, Alan Mao

RNAget: an API to securely retrieve RNA quantifications

Bioinformatics(2023)10.1093/bioinformatics/btad126

N/A

0.241DataRank · unranked

4 citations

Emilio Palumbo, Jeremy Adams, David Bujold, Guillaume Bourque, Jared L. Nedzel +58 more

Targeted in silico characterization of fusion transcripts in tumor and normal tissues via FusionInspector

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.02.454639

N/A

0.208DataRank · unranked

3 citations

Alexander Dobin, Mahmoud Ghandi, Anne Van Arsdale, Timothy L. Tickle, James Robinson +4 more

Evaluation of software impact designed for biomedical research: Are we measuring what's meaningful?

arXiv (Cornell University)(2023)10.48550/arxiv.2306.03255

N/A

0.165DataRank · unranked

2 citations

Andrei A. Ivanov, John Chamberlin, David A. Hanauer, Candace L. Savonen, Mary J. Goldman +22 more

Complex HPV-human DNA structures revealed by large-scale DNA analyses in an HPV-cancer derived cell line

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.06.680684

N/A

0DataRank · unranked

0 citations

Yoke-Chen Chang, Vandya Rao, Jessie Hollingsworth, Michelle Brown, Debajyoti Kabiraj +11 more

Multiplexed mRNA assembly into ribonucleoprotein particles plays an operon-like role in the control of yeast cell physiology

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.28.175851

N/A

0DataRank · unranked

2 citations

Dimitry Zabezhinsky, Rita Gelin-Licht, Brian J. Haas, Michael CA Dyhr, Hannah S. Sperber +3 more

Multiplexed mRNA assembly into ribonucleoprotein particles plays an operon-like role in the control of yeast cell physiology

eLife(2021)10.7554/elife.66050

N/A

0DataRank · unranked

28 citations

Dmitry Zabezhinsky, Rita Gelin-Licht, Brian J. Haas, Michael CA Dyhr, Hannah S. Sperber +3 more

Best practices to evaluate the impact of biomedical research software—metric collection beyond citations

Bioinformatics(2024)10.1093/bioinformatics/btae469

N/A

0DataRank · unranked

6 citations

Andrei A. Ivanov, John Chamberlin, David A. Hanauer, Candace L. Savonen, M Goldman +22 more

Serum, Cell-Free, HPV-Human DNA Junction Detection and HPV Typing for Predicting and Monitoring Cervical Cancer Recurrence

medRxiv(2024)10.1101/2024.09.16.24313343

N/A

0DataRank · unranked

0 citations

Olga Mescheryakova, Sonia Gallego, Elaine C. Maggi, Bryan Harmon, D.Y.S. Kuo +6 more

Informatics at the Frontier of Cancer Research

Cancer Research(2025)10.1158/0008-5472.can-24-2829

N/A

0DataRank · unranked

0 citations

Taxiarchis Botsis, Pablo G. Cámara, Lauren Ciotti, Lee Cooper, Jeremy Goecks +19 more

Brian J. Haas

Indexed papers

Top data-sharing exemplar

Papers