Martin J. Aryee

Also affiliated with Dana-Farber Cancer Institute

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 24 papers. Top paper: “Transcriptional States and Chromatin Accessibility Underlying Human Erythropoiesis”.

Transcriptional States and Chromatin Accessibility Underlying Human Erythropoiesis

Cell Reports(2019)10.1016/j.celrep.2019.05.046

N/A

4.1DataRank · unranked

178 citations

Caleb A. Lareau, Erik L. Bao, Satish K. Nandakumar, Christoph Muus, Jacob C. Ulirsch +8 more

A comparative risk assessment of burden of disease and injury attributable to 67 risk factors and risk factor clusters in 21 regions, 1990–2010: a systematic analysis for the Global Burden of Disease Study 2010

The Lancet(2012)10.1016/s0140-6736(12)61766-8

N/A

1.4DataRank · unranked

11963 citations

Theo Vos, Abraham D Flaxman, Goodarz Danaei, Abbas Sheikhtaheri, Heather Adair-Rohani +254 more

Congenital anemia reveals distinct targeting mechanisms for master transcription factor GATA1

Blood(2022)10.1182/blood.2021013753

N/A

1.1DataRank · unranked

30 citations

Caleb A. Lareau, Erik L. Bao, Nan Liu, Taiju Utsugisawa, Alex M. Tseng +27 more

Massively parallel single-cell mitochondrial DNA genotyping and chromatin profiling

Nature Biotechnology(2020)10.1038/s41587-020-0645-6

N/A

0.860DataRank · unranked

307 citations

Leif S. Ludwig, Christoph Muus, Satyen H. Gohil, Tongtong Zhao, Zachary Chiang +15 more

Detection of allele-specific expression in spatial transcriptomics with spASE

Genome biology(2024)10.1186/s13059-024-03317-4

N/A

0.522DataRank · unranked

12 citations

Dylan Cable, Irving Barrera, Tongtong Zhao, Evan Murray, Martin J. Aryee +3 more

Author Correction: Massively parallel single-cell mitochondrial DNA genotyping and chromatin profiling

Nature Biotechnology(2023)10.1038/s41587-023-01942-1

N/A

0.179DataRank · unranked

2 citations

Leif S. Ludwig, Christoph Muus, Satyen H. Gohil, Tongtong Zhao, Zachary Chiang +15 more

Reverse Transcriptase Inhibition Disrupts Repeat Element Life Cycle in Colorectal Cancer

Cancer Discovery(2022)10.1158/2159-8290.cd-21-1117

N/A

0DataRank · unranked

60 citations

Aparna R. Parikh, Alexander Solovyov, Eunae You, Anupriya S. Kulkarni, Chong Chu +44 more

CRISPR-Cas9 treatment partially restores amyloid-β 42/40 in human fibroblasts with the Alzheimer’s disease PSEN1 M146L mutation

Molecular Therapy — Nucleic Acids(2022)10.1016/j.omtn.2022.03.022

N/A

0DataRank · unranked

50 citations

Agnieszka Molisak, Florian Perrin, Linn Streubel-Gallasch, Sarah M. Fayad, Daniel Y. Kim +12 more

Genome-wide DNA methylation patterns reveal clinically relevant predictive and prognostic subtypes in human osteosarcoma

Communications Biology(2022)10.1038/s42003-022-03117-1

N/A

0DataRank · unranked

40 citations

Erik T. Newman, Andrew D. Kelly, David Xiang, Ziying Zhang, Caroline A. Luscko +10 more

Spatial transcriptomics reveals distinct tissue niches linked with steroid responsiveness in acute gastrointestinal GVHD

Blood(2023)10.1182/blood.2023020644

N/A

0DataRank · unranked

9 citations

Michael J. Raabe, Evan R. Lang, Yuhui Song, Chenyue Lu, Vikram Deshpande +6 more

Integrative PTEN Enhancer Discovery Reveals a New Model of Enhancer Organization

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.20.558459

N/A

0DataRank · unranked

6 citations

Haley M. Hutchinson, Annie Liu, Viraat Y. Goel, Corriene Sept, Holly Kim +9 more

High-resolution CTCF footprinting reveals impact of chromatin state on cohesin extrusion dynamics

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.20.563340

N/A

0DataRank · unranked

5 citations

Y. Esther Tak, Christian Cerda-Smith, Haley M. Hutchinson, Viraat Y. Goel, Marco Blanchette +7 more

Single Cell Spatial Transcriptomic Profiling Identifies a LINE1 Associated Disarrayed Immune Microenvironment in Hepatocellular Carcinoma

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.04.570014

N/A

0DataRank · unranked

1 citations

Cole Nawrocki, Bidish K. Patel, Amaya Pankaj, Zhoubo Guo, Matthew J. Emmett +10 more

Data from Reverse Transcriptase Inhibition Disrupts Repeat Element Life Cycle in Colorectal Cancer

(2023)10.1158/2159-8290.c.6549619.v1

N/A

0DataRank · unranked

0 citations

Aparna R. Parikh, Alexander Solovyov, Eunae You, Anupriya S. Kulkarni, Chong Nam Chu +44 more

Human lung cancer harbors spatially organized stem-immunity hubs associated with response to immunotherapy

Nature Immunology(2024)10.1038/s41590-024-01792-2

N/A

0DataRank · unranked

132 citations

Linda T. Nieman, Maxwell Spurrell, Vjola Jorgji, Liad Elmelech, Peter Richieri +32 more

Disruption of cellular plasticity by repeat RNAs in human pancreatic cancer

Cell(2024)10.1016/j.cell.2024.09.024

N/A

0DataRank · unranked

23 citations

Patrick Danaher, Chenyue Lu, Siyu Sun, Luli S. Zou, Ildiko E. Phillips +24 more

A CTCF-binding site in the Mdm1-Il22-Ifng locus shapes cytokine expression profiles and plays a critical role in early Th1 cell fate specification

Immunity(2024)10.1016/j.immuni.2024.04.007

N/A

0DataRank · unranked

16 citations

Hiroyuki Nagashima, Nilisha Fernando, Victor Bass, Jaanam Gopalakrishnan, Sadie Signorella +22 more

High-resolution CTCF footprinting reveals impact of chromatin state on cohesin extrusion

Nature Communications(2025)10.1038/s41467-025-57775-w

N/A

0DataRank · unranked

11 citations

Y. Esther Tak, Viraat Y. Goel, Mital S. Bhakta, Christian Cerda-Smith, Haley M. Hutchinson +7 more

Bone Marrow Adipokine Mediates Hematopoietic Regeneration and Stem Cell Fitness

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.28.672647

N/A

0DataRank · unranked

0 citations

Angelo D’Alessandro, Abhishek K. Singh, Yi Zheng, John Manis, Li Chai +12 more

Data-driven polymer model for mechanistic exploration of diploid genome organization

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.27.968735

N/A

0DataRank · unranked

10 citations

Alejandro Reyes, Sarah E. Johnstone, Martin J. Aryee, B Bernstein, Bin Zhang +1 more

STAG2 loss rewires oncogenic and developmental programs to promote metastasis in Ewing sarcoma

Cancer Cell(2021)10.1016/j.ccell.2021.05.007

N/A

0DataRank · unranked

125 citations

Gabriela Alexe, Bo Kyung A. Seong, Diana Lu, Elizabeth Hwang, Denes Hnisz +23 more

Screening human lung cancer with predictive models of serum magnetic resonance spectroscopy metabolomics

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2110633118

N/A

0DataRank · unranked

38 citations

Mara J. Lauer, Yannick Berker, Marcella R. Cardoso, Lindsey A. Vandergrift, Piet Habbel +7 more

Global-scale CRISPR gene editor specificity profiling by ONE-seq identifies population-specific, variant off-target effects

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.05.438458

N/A

0DataRank · unranked

39 citations

Daniel Y. Kim, Kanae Sasaki, Matthew C. Canver, Xiao Wang, Hina Shah +14 more

Gene clustering drives the transcriptional coherence of disparate biological processes in eukaryotes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.17.440292

N/A

0DataRank · unranked

0 citations

Michael S. Lawrence, Martin J. Aryee, Mo Motamedi, Richard Joh