Siddappa N. Byrareddy

Also affiliated with University of Nebraska Medical Center

Immunology and MicrobiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 71 papers. Top paper: “Defining the Innate Immune Responses for SARS-CoV-2-Human Macrophage Interactions”.

Defining the Innate Immune Responses for SARS-CoV-2-Human Macrophage Interactions

Frontiers in Immunology(2021)10.3389/fimmu.2021.741502

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1.4DataRank · unranked

47 citations

Pravin Yeapuri, Jatin Machhi, Katherine E. Olson, Farah Shahjin, Vikas Kumar +8 more

Transformation of dolutegravir into an ultra-long-acting parenteral prodrug formulation

Nature Communications(2022)10.1038/s41467-022-30902-7

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1.4DataRank · unranked

46 citations

Brady Sillman, Aditya N. Bade, Sean N. Avedissian, Anthony T. Podany, JoEllyn McMillan +18 more

The single-cell opioid responses in the context of HIV (SCORCH) consortium

Molecular Psychiatry(2024)10.1038/s41380-024-02620-7

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0.526DataRank · unranked

16 citations

Rianne R. Campbell, Mary Kay Lobo, Joseph P. Receveur, Kriti Agrawal, Alejandra Borjabad +81 more

Animal models for SARS‐CoV‐2 research: A comprehensive literature review

Transboundary and Emerging Diseases(2020)10.1111/tbed.13907

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82 citations

Arpan Acharya, Mahesh Mohan, Caroline L. Ng, St Patrick Reid, Siddappa N. Byrareddy +1 more

Drug Repurposing Approaches to Combating Viral Infections

Journal of Clinical Medicine(2020)10.3390/jcm9113777

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59 citations

Mahesh Mohan, Siddappa N. Byrareddy, Jay Trivedi

SARS-CoV2 induced respiratory distress: Can cannabinoids be added to anti-viral therapies to reduce lung inflammation?

Brain Behavior and Immunity(2020)10.1016/j.bbi.2020.04.079

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38 citations

Mahesh Mohan, Siddappa N. Byrareddy

Diabetes and COVID-19 risk: an miRNA perspective

American Journal of Physiology-Heart and Circulatory Physiology(2020)10.1152/ajpheart.00489.2020

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24 citations

Ritesh Tandon, Siddappa N. Byrareddy, Paras K. Mishra

COVID‐19 and AIDS: Outcomes from the coexistence of two global pandemics and the importance of chronic antiretroviral therapy

Journal of Medical Virology(2020)10.1002/jmv.26416

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16 citations

Arpan Acharya, Mahesh Mohan, Siddappa N. Byrareddy, Raj H. Patel

IFN-I Independent Antiviral Immune Response to Vesicular Stomatitis Virus Challenge in Mouse Brain

Vaccines(2020)10.3390/vaccines8020326

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12 citations

Siddappa N. Byrareddy, Debasis Nayak, Anurag Mishra

Long Term Delta-9-tetrahydrocannabinol Administration Inhibits Proinflammatory Responses in Minor Salivary Glands of Chronically Simian Immunodeficieny Virus Infected Rhesus Macaques

Viruses(2020)10.3390/v12070713

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10 citations

Karol Sestak, Siddappa N. Byrareddy, Mahesh Mohan, Xavier Álvarez

Biomarkers of Activation and Inflammation to Track Disparity in Chronological and Physiological Age of People Living With HIV on Combination Antiretroviral Therapy

Frontiers in Immunology(2020)10.3389/fimmu.2020.583934

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35 citations

Samuel D. Johnson, Arpan Acharya, Suresh Pallikkuth, Mohan Mahesh, Siddappa N. Byrareddy +1 more

Molecular Aspects of COVID-19 Differential Pathogenesis

Pathogens(2020)10.3390/pathogens9070538

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25 citations

Arpan Acharya, St Patrick Reid, Mukesh Kumar, Siddappa N. Byrareddy, Hussin A. Rothan

Retinoic Acid Improves the Recovery of Replication-Competent Virus from Latent SIV Infected Cells

Cells(2020)10.3390/cells9092076

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7 citations

Arpan Acharya, Nanda Kishore Routhu, Keely Pierzchalski, Jace W. Jones, Maureen A. Kane +4 more

Safety and Immunological Evaluation of Interleukin-21 Plus Anti-α4β7 mAb Combination Therapy in Rhesus Macaques

Frontiers in Immunology(2020)10.3389/fimmu.2020.01275

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6 citations

Srijayaprakash Uppada, Kabita Pandey, Colin T. King, Kevin Nguyen, In‐Bo Shim +5 more

Modified Papanicolaou staining for oral swab samples stored long term

Biotechnic & Histochemistry(2020)10.1080/10520295.2020.1804075

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1 citations

Lepakshe S. V. Madduri, Sravani Singu, Brooke R. Lawson, Linda Bauer, Alison G. Freifeld +3 more

Lung Bronchial Epithelial Cells are HIV Targets for Proviral Genomic Integration

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.01.126821

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4 citations

Manisha Singh, Arpan Acharya, Kieu Chinh, Palsamy Periyasamy, Marko Manevski +9 more

Mental Health Issues During and After COVID-19 Vaccine Era

Brain Research Bulletin(2021)10.1016/j.brainresbull.2021.08.012

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115 citations

Michellie Thurman, Samuel D. Johnson, Arpan Acharya, Morgan Johnston, Elizabeth Klug +4 more

Cannabinoid control of gingival immune activation in chronically SIV-infected rhesus macaques involves modulation of the indoleamine-2,3-dioxygenase-1 pathway and salivary microbiome

EBioMedicine(2021)10.1016/j.ebiom.2021.103769

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24 citations

Eun-Hee Lee, Xavier Álvarez, Karol Sestak, Binhua Ling, Siddappa N. Byrareddy +3 more

Human Immunodeficiency Virus and Severe Acute Respiratory Syndrome Coronavirus 2 Coinfection: A Systematic Review of the Literature and Challenges

AIDS Research and Human Retroviruses(2021)10.1089/aid.2020.0284

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21 citations

Arpan Acharya, Hitendra S. Chand, Mahesh Mohan, Siddappa N. Byrareddy, Raj H. Patel

Therapeutic implications of SARS-CoV-2 dysregulation of the gut-brain-lung axis

World Journal of Gastroenterology(2021)10.3748/wjg.v27.i29.4763

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21 citations

Omalla A. Olwenyi, Namita Bhyravbhatla, Michellie Thurman, Kabita Pandey, Elizabeth Klug +9 more

HIV-1 Productively Infects and Integrates in Bronchial Epithelial Cells

Frontiers in Cellular and Infection Microbiology(2021)10.3389/fcimb.2020.612360

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20 citations

Shashi P. Singh, Arpan Acharya, Kieu Chinh, Palsamy Periyasamy, Marko Manevski +9 more

Mechanistic basis of post-treatment control of SIV after anti-α4β7 antibody therapy

PLoS Computational Biology(2021)10.1371/journal.pcbi.1009031

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9 citations

Youfang Cao, David P. Durham, Siddappa N. Byrareddy, Aftab A. Ansari, Nancy H. Ruddle +4 more

Diminished Peripheral CD29hi Cytotoxic CD4+ T Cells Are Associated With Deleterious Effects During SIV Infection

Frontiers in Immunology(2021)10.3389/fimmu.2021.734871

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7 citations

Samuel D. Johnson, Kabita Pandey, Michellie Thurman, Arpan Acharya, Shilpa Buch +5 more

An emerging and variant viral promoter of HIV-1 subtype C exhibits low-level gene expression noise

Retrovirology(2021)10.1186/s12977-021-00572-2

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7 citations

Disha Bhange, Kavita Mehta, Yuvrajsinh Gohil, Harshit Kumar Prajapati, Siddappa N. Byrareddy +3 more

Risk Factors Associated with the Clinical Outcomes of COVID-19 and Its Variants in the Context of Cytokine Storm and Therapeutics/Vaccine Development Challenges

Vaccines(2021)10.3390/vaccines9080938

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5 citations

Padmavathi Tipparaju, Tania Mulherkar, Edward H. Lin, Victoria Mischley, Ratuja Kulkarni +4 more

Blockade of SARS-CoV-2 infection in vitro by highly potent PI3K-α/mTOR/BRD4 inhibitor

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.02.433604

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13 citations

Kabita Pandey, Michellie Thurman, Kishore B. Challagundala, Kendra R. Vann, Tatiana G. Kutateladze +4 more

Distinct Mucoinflammatory Phenotype and the Immunomodulatory Long Noncoding Transcripts Associated with SARS-CoV-2 Airway Infection

medRxiv(2021)10.1101/2021.05.13.21257152

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13 citations

Arpan Acharya, Marko Manevski, Kabita Pandey, Glen M. Borchert, Madhavan Nair +4 more

Defining the Immune Responses for SARS-CoV-2-Human Macrophage Interactions

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.07.449660

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6 citations

Pravin Yeapuri, Jatin Machhi, Katherine E. Olson, Farah Shahjin, You Zhou +7 more

Discovery and in-vitro evaluation of potent SARS-CoV-2 entry inhibitors

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.02.438204

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2 citations

Kabita Pandey, Michellie Thurman, Elizabeth Klug, Jay Trivedi, Christian L. Lorson +3 more

Viremia controls Env-specific antibody-secreting cell responses in simian immunodeficiency virus infected macaques pre and post-antiretroviral therapy

AIDS(2021)10.1097/qad.0000000000002998

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0DataRank · unranked

0 citations

Jung Joo Hong, Praveen K. Amancha, Kenneth A. Rogers, Aftab A. Ansari, Siddappa N. Byrareddy +2 more

Binding of the SARS-CoV-2 envelope E protein to human BRD4 is essential for infection

Structure(2022)10.1016/j.str.2022.05.020

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33 citations

Arpan Acharya, Suk Min Jang, Catherine Lachance, Mohamad Zandian, Tina Holt +8 more

miR-15a and miR-15b modulate natural killer and CD8+T-cell activation and anti-tumor immune response by targeting PD-L1 in neuroblastoma

Molecular Therapy — Oncolytics(2022)10.1016/j.omto.2022.03.010

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37 citations

Philip Prathipati, Omalla A. Olwenyi, Srinivas Chava, Oghenetejiri V. Smith, Subash C. Gupta +5 more

Morphine suppresses peripheral responses and transforms brain myeloid gene expression to favor neuropathogenesis in SIV infection

Frontiers in Immunology(2022)10.3389/fimmu.2022.1012884

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20 citations

Meng Niu, Brenda Morsey, Benjamin G. Lamberty, Katy Emanuel, Palsamy Periyasamy +10 more

Early treatment with anti-α4β7 antibody facilitates increased gut macrophage maturity in SIV-infected rhesus macaques

Frontiers in Immunology(2022)10.3389/fimmu.2022.1001727

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12 citations

Lindsey A. Knight, Narendra Kumar, Omalla A. Olwenyi, Michellie Thurman, Smriti Mehra +3 more

Immunomodulatory LncRNA on antisense strand of ICAM-1 augments SARS-CoV-2 infection-associated airway mucoinflammatory phenotype

iScience(2022)10.1016/j.isci.2022.104685

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17 citations

Arpan Acharya, Marko Manevski, Dominika Houserova, Michael D. Cioffi, Kabita Pandey +7 more

Deprenyl reduces inflammation during acute SIV infection

iScience(2022)10.1016/j.isci.2022.104207

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8 citations

Kaitlyn Runner, Zachary D. Brodnik, Brenda Morsey, B.G.H. Lamberty, H.S. Johnson +6 more

Systems biology analyses reveal enhanced chronic morphine distortion of gut-brain interrelationships in simian human immunodeficiency virus infected rhesus macaques

Frontiers in Neuroscience(2022)10.3389/fnins.2022.1001544

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6 citations

Samuel D. Johnson, Mehdi R. M. Bidokhti, Vandana Thakur, Kabita Pandey, Michellie Thurman +8 more

Modular nanoarray vaccine for SARS-CoV-2

Nanomedicine Nanotechnology Biology and Medicine(2022)10.1016/j.nano.2022.102604

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5 citations

Kabita Pandey, Rajesh Rajaiah, Omalla A. Olwenyi, Aditya N. Bade, Arpan Acharya +5 more

Catching BETs by viruses

Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms(2022)10.1016/j.bbagrm.2022.194859

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4 citations

Irene P. Chen, Siddappa N. Byrareddy, Danica Galonić Fujimori, Mélanie Ott, Tatiana G. Kutateladze +1 more

Peptide Nanoarray Scaffold Vaccine for SARS-COV-2 and Its Variants of Concerns

Research Square(2022)10.21203/rs.3.rs-1206402/v1

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1 citations

Kabita Pandey, Rajesh Rajaiah, Omalla A. Olwenyi, Aditya N. Bade, Arpan Acharya +5 more

Pathways for Dolutegravir Transformation from a Daily Oral to a Once-a-Year Parenteral Medicine

Research Square(2022)10.21203/rs.3.rs-1255147/v1

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0 citations

Brady Sillman, Aditya N. Bade, JoEllyn McMillan, Nagsen Gautam, Brandon Hanson +15 more

Morphine Suppresses Peripheral Responses and Transforms Brain Myeloid Gene Expression to Favor Neuropathogenesis in SIV Infection

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.25.501436

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0DataRank · unranked

0 citations

Meng Niu, Brenda Morsey, Benjamin G. Lamberty, Katy Emanuel, Palsamy Periyasamy +10 more

Characterization of multiple interactions between the envelope E protein of SARS-CoV-2 and human BRD4

STAR Protocols(2022)10.1016/j.xpro.2022.101853

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0DataRank · unranked

0 citations

Suk Min Jang, Catherine Lachance, Arpan Acharya, Siddappa N. Byrareddy, Jacques Côté +2 more

526 miR-15a and miR-15b modulate natural killer and CD8+T-cell activation and anti-tumor immune response by targeting PD-L1 in neuroblastoma

Regular and Young Investigator Award Abstracts(2022)10.1136/jitc-2022-sitc2022.0526

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0DataRank · unranked

0 citations

Anup S. Pathania, Philip Prathipati, Srinivas Chava, Omalla A. Olwenyi, Oghenetejiri V. Smith +5 more

Therapeutic Potential of Cannabis: A Comprehensive Review of Current and Future Applications

Biomedicines(2023)10.3390/biomedicines11102630

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104 citations

Rahul Mohan, Lakmini S. Premadasa, Arpan Acharya, Mahesh Mohan, Siddappa N. Byrareddy +1 more

Clinical characteristics and novel mutations of omicron subvariant XBB in Tamil Nadu, India – a cohort study

The Lancet Regional Health - Southeast Asia(2023)10.1016/j.lansea.2023.100272

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25 citations

Sree J. Karishma, Kannan Hemashree, Yean K. Yong, Suvaiyarasan Suvaithenamudhan, Manivannan Rajeshkumar +23 more

ACE-2, TMPRSS2, and Neuropilin-1 Receptor Expression on Human Brain Astrocytes and Pericytes and SARS-CoV-2 Infection Kinetics

International Journal of Molecular Sciences(2023)10.3390/ijms24108622

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30 citations

Arpan Acharya, Sean N. Avedissian, Siddappa N. Byrareddy, Courtney V. Fletcher, Anthony T. Podany +2 more

Plasma CXCL8 and MCP-1 as surrogate plasma biomarkers of latent tuberculosis infection among household contacts–A cross-sectional study

PLOS Global Public Health(2023)10.1371/journal.pgph.0002327

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18 citations

Bijulal Aswathy, Yean K. Yong, Asha Frederick, Lakshmi Murali, Vasudevan Kalaivani +19 more

Cannabinoid enhancement of lncRNA MMP25-AS1/MMP25 interaction reduces neutrophil infiltration and intestinal epithelial injury in HIV/SIV infection

JCI Insight(2023)10.1172/jci.insight.167903

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15 citations

Eun Hee Lee, Marina McDew‐White, Xavier Álvarez, Sahana Jayakumar, Binhua Ling +5 more

Inflammation-Associated Lung Tissue Remodeling and Fibrosis in Morphine-Dependent SIV-Infected Macaques

American Journal Of Pathology(2023)10.1016/j.ajpath.2022.12.016

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7 citations

Susmita Sil, Shannon Callen, Hitendra S. Chand, Mohan L. Sopori, Todd A. Wyatt +5 more

Proteomic landscape of astrocytes and pericytes infected with HIV/SARS-CoV-2 mono/co-infection, impacting on neurological complications

Research Square(2023)10.21203/rs.3.rs-3031591/v1

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4 citations

Anoop T. Ambikan, Michellie Thurman, Mohid Reza Malik, Shetty Ravi Dyavar, Ákos Végvári +3 more

Plasma CXCL8 and MCP-1 as biomarkers of latent tuberculosis infection

medRxiv(2023)10.1101/2023.08.07.23293767

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2 citations

Bijulal Aswathy, Yean K. Yong, Asha Frederick, Lakshmi Murali, Vasudevan Kalaivani +18 more

SARS-CoV-2 variants mediated tissue-specific metabolic reprogramming determines the disease pathophysiology in a hamster model

Brain Behavior and Immunity(2024)10.1016/j.bbi.2024.10.032

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9 citations

Anoop T. Ambikan, Arpan Acharya, Samuel D. Johnson, Sean N. Avedissian, Ákos Végvári +3 more

Dual role for microbial short-chain fatty acids in modifying SIV disease trajectory following anti-α4β7 antibody administration

Annals of Medicine(2024)10.1080/07853890.2024.2315224

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9 citations

Nageswara Pilli, Jianshi Yu, Lindsey A. Knight, Maureen A. Kane, Siddappa N. Byrareddy +1 more

Emergence of SARS-CoV-2 omicron variant JN.1 in Tamil Nadu, India - Clinical characteristics and novel mutations

Scientific Reports(2024)10.1038/s41598-024-68678-z

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9 citations

Sathish Sankar, Yean K. Yong, Amudhan Murugesan, Suvaiyarasan Suvaithenamudhan, Kannan Hemashree +18 more

Design of novel and highly selective SARS-CoV-2 main protease inhibitors

Antimicrobial Agents and Chemotherapy(2024)10.1128/aac.00562-24

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7 citations

Ian Tietjen, Nitesh Kumar Nandwana, Joel Cassel, Troy E. Messick, Emery T. Register +9 more

Comparative analysis of human gut- and blood-derived mononuclear cells: contrasts in function and phenotype

Frontiers in Immunology(2024)10.3389/fimmu.2024.1336480

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4 citations

Priscila O. Barros, Tamara Berthoud, Siddappa N. Byrareddy, Michaeline McGuinty, D. William Cameron +2 more

In-vitro and in-vivo assessment of nirmatrelvir penetration into CSF, central nervous system cells, tissues, and peripheral blood mononuclear cells

Scientific Reports(2024)10.1038/s41598-024-60935-5

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4 citations

Malik Johid Reza, Anthony T. Podany, Michael Neely, Nathaniel J. Rhodes, Kimberly K. Scarsi +8 more

SRX3177, a CDK4/6-PI3K-BET inhibitor, in combination with an RdRp inhibitor, Molnupiravir, or an entry inhibitor MU-UNMC-2, has potent antiviral activity against the Omicron variant of SARS-CoV-2

Antiviral Research(2024)10.1016/j.antiviral.2024.105904

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3 citations

Arpan Acharya, Dhananjaya Pal, Prashant Jain, Kamalendra Singh, Donald L. Durden +4 more

Establishment of a Four‐Cell In Vitro Blood‐Brain Barrier Model With Human Primary Brain Cells

Current Protocols(2024)10.1002/cpz1.1067

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3 citations

Ukamaka Modebelu, Courtney V. Fletcher, Anthony T. Podany, Kimberly K. Scarsi, Siddappa N. Byrareddy +9 more

Attrition in serum anti-DENV antibodies correlates with high anti-SARS-CoV-2 IgG levels and low DENV positivity in mosquito vectors—Findings from a state-wide cluster-randomized community-based study in Tamil Nadu, India

PLOS Global Public Health(2024)10.1371/journal.pgph.0003608

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3 citations

Sathish Sankar, Yean K. Yong, Abdul R. Anshad, Samudi Chandramathi, Anavarathan Somasundaram +22 more

Emergence of SARS-CoV-2 Omicron Variant JN.1 in Tamil Nadu, India - Clinical Characteristics and Novel Mutations

medRxiv(2024)10.1101/2024.04.16.24305882

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4 citations

Sathish Sankar, Yean K. Yong, Amudhan Murugesan, Suvaiyarasan Suvaithenamudhan, Kannan Hemashree +18 more

Emergence of SARS-CoV-2 Omicron Variant JN.1 in Tamil Nadu, India - Clinical Characteristics and Novel Mutations

Research Square(2024)10.21203/rs.3.rs-4285442/v1

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4 citations

Sathish Sankar, Yean K. Yong, Amudhan Murugesan, Suvaiyarasan Suvaithenamudhan, Kannan Hemashree +18 more

Immunological insights into the re-emergence of human metapneumovirus

Current Opinion in Immunology(2025)10.1016/j.coi.2025.102562

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6 citations

Siddappa N. Byrareddy, Arpan Acharya

IL-21 and anti-α4β7 dual therapy during ART promotes immunological and microbiome responses in SIV-infected macaques

JCI Insight(2025)10.1172/jci.insight.184491

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5 citations

María Pino, Arpan Acharya, Julien Clain, Deepanwita Bose, Kevin Nguyen +5 more

Neurovirulent and non-neurovirulent strains of HIV-1 and their Tat proteins induce differential cytokine-chemokine profiles

NeuroImmune Pharmacology and Therapeutics(2025)10.1515/nipt-2024-0020

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1 citations

Milka A. Rodriguez, Siddappa N. Byrareddy, Udaykumar Ranga, Vinayaka R. Prasad, Vasudev R Rao

Age‐Associated Expansion of HIV / SIV Reservoirs in People With HIV and SIV ‐Infected Macaques

Aging Cell(2025)10.1111/acel.70252

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1 citations

Debapriya Sutar, Mahesh Mohan, Varan Govind, François Villinger, Suresh Pallikkuth +2 more

Opioid-induced immunosuppression of brain myeloid cells in SIV-infected rhesus macaques

Research Square(2025)10.21203/rs.3.rs-7394731/v1

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1 citations

Xiaoke Xu, Meng Niu, Benjamin G. Lamberty, Katy Emanuel, Shannon Callen +4 more

Methods to characterize the vaginal microbiome in a rhesus macaque model of simian human immunodeficiency virus (SHIV) transmission uncover epithelium-associated enrichment of Prevotella

Current Research in Microbial Sciences(2025)10.1016/j.crmicr.2025.100526

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0 citations

Samuel D. Johnson, Paden N. Dean, Arpan Acharya, Siddappa N. Byrareddy, Rahul Mohan

COVID-19 and Cancer Comorbidity: Therapeutic Opportunities and Challenges

Theranostics(2020)10.7150/thno.51471

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129 citations

Philip Prathipati, Bakrudeen AA. Abdul, Srinivas Chava, Santharam S. Katta, Subash Gupta +6 more

Rapamycin as a potential repurpose drug candidate for the treatment of COVID-19

Chemico-Biological Interactions(2020)10.1016/j.cbi.2020.109282

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86 citations

Siddappa N. Byrareddy, Amjad Husain