J. Wade Harper

Biochemistry, Genetics and Molecular BiologyNeuroscience

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

7.1Author DataRank

Indexed papers

5in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.19.905109

Top 6%

3.7DataRank

Top 6%121 citations

Raphael J. Bruckner, José Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab +21 more

Papers

Driven by 53 papers — median percentile 71. Top paper: “EDF1 coordinates cellular responses to ribosome collisions”.

EDF1 coordinates cellular responses to ribosome collisions

eLife(2020)10.7554/elife.58828

N/A

3.9DataRank · unranked

192 citations

Alban Ordureau, Katharina Best, James A. Saba, Boris Zinshteyn, Elayanambi Sundaramoorthy +10 more

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.19.905109

Top 6%

3.7DataRank

Top 6%121 citations

Raphael J. Bruckner, José Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab +21 more

A multi-scale map of cell structure fusing protein images and interactions

Nature(2021)10.1038/s41586-021-04115-9

Top 9%

2.3DataRank

Top 9%80 citations

Edward L. Huttlin, Casper Winsnes, Maya L. Gosztyla, Ludivine Wacheul, Marcus R. Kelly +23 more

The 22q11.2 region regulates presynaptic gene-products linked to schizophrenia

Nature Communications(2022)10.1038/s41467-022-31436-8

N/A

1.4DataRank · unranked

61 citations

Olli Pietiläinen, Mykyta Artomov, Matthew Tegtmeyer, Vera Valakh, Leevi Lehtonen +40 more

Multimodal cell maps as a foundation for structural and functional genomics

Nature(2025)10.1038/s41586-025-08878-3

Top 29%

0.697DataRank

Top 29%36 citations

Mengzhou Hu, Gege Qian, Kyung‐Mee Moon, Abantika Pal, Neelesh Soni +29 more

Mapping cell structure across scales by fusing protein images and interactions

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.21.163709

Top 49%

0.365DataRank

Top 49%7 citations

Casper Winsnes, Edward L. Huttlin, Fan Zheng, Wei Ouyang, Jisoo Park +8 more

UniProtExtractR: an app and R package for easily extracting protein-specific UniProtKB information and fine-tuning organelle resolution

Bioinformatics Advances(2023)10.1093/bioadv/vbad157

Top 78%

0.104DataRank

Top 78%1 citations

J. Wade Harper, Alexandra Panov

Quantitative proteomics reveals the selectivity of ubiquitin-binding autophagy receptors in the turnover of damaged lysosomes by lysophagy

eLife(2021)10.7554/elife.72328

N/A

0DataRank · unranked

170 citations

Sharan Swarup, Melissa Hoyer, Joao A. Paulo, J. Wade Harper, Vinay V. Eapen

Temporal proteomics during neurogenesis reveals large-scale proteome and organelle remodeling via selective autophagy

Molecular Cell(2021)10.1016/j.molcel.2021.10.001

N/A

0DataRank · unranked

104 citations

Felix Kraus, Jiuchun Zhang, Heeseon An, Sookhee Park, Tim Ahfeldt +3 more

iRQC, a surveillance pathway for 40S ribosomal quality control during mRNA translation initiation

Cell Reports(2021)10.1016/j.celrep.2021.109642

N/A

0DataRank · unranked

77 citations

Heeseon An, Elayanambi Sundaramoorthy, Marilyn Leonard, Alison C. Vicary, J. Wade Harper +2 more

Global ubiquitylation analysis of mitochondria in primary neurons identifies endogenous Parkin targets following activation of PINK1

Science Advances(2021)10.1126/sciadv.abj0722

N/A

0DataRank · unranked

72 citations

Alban Ordureau, Michael Stevens, François Singh, Raja Sekhar Nirujogi, Marek Gierlinski +8 more

Quantitative intravital imaging in zebrafish reveals in vivo dynamics of physiological-stress-induced mitophagy

Journal of Cell Science(2021)10.1242/jcs.256255

N/A

0DataRank · unranked

61 citations

Arkadi Shwartz, Jin‐Mi Heo, Eleanor D. Quenzer, Kyle A. LaBella, J. Wade Harper +2 more

ORF10–Cullin-2–ZYG11B complex is not required for SARS-CoV-2 infection

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2023157118

N/A

0DataRank · unranked

36 citations

Callie J. Donahue, Laura Pontano Vaites, Jie Li, Gergely Róna, Colin O’Leary +11 more

Functional conservation and divergence of the helix‐turn‐helix motif of E2 ubiquitin‐conjugating enzymes

The EMBO Journal(2021)10.15252/embj.2021108823

N/A

0DataRank · unranked

15 citations

Derek L. Bolhuis, Anneroos E Nederstigt, Joshua A. Boyer, Brenda Temple, Thomas Bonacci +9 more

Super Heavy TMTpro Labeling Reagent: An Alternative and Higher-Charge-State-Amenable Stable-Isotope-Labeled TMTpro Variant

Journal of Proteome Research(2021)10.1021/acs.jproteome.0c01056

N/A

0DataRank · unranked

4 citations

Qing Yu, Ryan Bomgarden, John Rogers, J. Wade Harper, Steven P. Gygi +2 more

Quantitative proteomics reveals the selectivity of ubiquitin-binding autophagy receptors in the turnover of damaged lysosomes by lysophagy

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.19.452535

N/A

0DataRank · unranked

4 citations

Sharan Swarup, Melissa Hoyer, Joao A. Paulo, J. Wade Harper, Vinay V. Eapen

Brain-derived autophagosome profiling reveals the engulfment of nucleoid-enriched mitochondrial fragments by basal autophagy in neurons

Neuron(2022)10.1016/j.neuron.2021.12.029

N/A

0DataRank · unranked

109 citations

Alban Ordureau, J. Wade Harper, Erika L.F. Holzbaur, Juliet Goldsmith

Deficiency of the frontotemporal dementia gene GRN results in gangliosidosis

Nature Communications(2022)10.1038/s41467-022-33500-9

N/A

0DataRank · unranked

101 citations

Sharan Swarup, Yohannes A. Ambaw, Pedro Carpio Malia, Ruth C. Richards, Alexander W. Fischer +14 more

Spatial snapshots of amyloid precursor protein intramembrane processing via early endosome proteomics

Nature Communications(2022)10.1038/s41467-022-33881-x

N/A

0DataRank · unranked

58 citations

Frances V Hundley, Qing Yu, Katherine A. Overmyer, Dain R. Brademan, Lia R. Serrano +7 more

Mechanisms controlling selective elimination of damaged lysosomes

Current Opinion in Physiology(2022)10.1016/j.cophys.2022.100590

N/A

0DataRank · unranked

35 citations

Sharan Swarup, J. Wade Harper, Melissa Hoyer

Substitution of PINK1 Gly411 modulates substrate receptivity and turnover

Autophagy(2022)10.1080/15548627.2022.2151294

N/A

0DataRank · unranked

31 citations

Dominika Fričová, Caleb S Hayes, Matt Coban, Roman Hudec, Jenny M. Bredenberg +20 more

Proteomics analysis of autophagy cargos reveals distinct adaptations in PINK1 and LRRK2 models of Parkinson disease

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.03.510717

N/A

0DataRank · unranked

8 citations

Alban Ordureau, C. Alexander Boecker, Madeleine Arany, J. Wade Harper, Erika L.F. Holzbaur +1 more

PARK15/FBXO7 is dispensable for PINK1/Parkin mitophagy in iNeurons and HeLa cell systems

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.02.514817

N/A

0DataRank · unranked

4 citations

Ellen A. Goodall, Ian R. Smith, Yizhi Jiang, Julia C. Paoli, Frank Adolf +5 more

Quantitative mapping of autophagic cargo during nutrient stress reveals YIPF3-YIPF4 as membrane receptors for Golgiphagy

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.06.519342

N/A

0DataRank · unranked

4 citations

Sharan Swarup, Ian R. Smith, Julia C. Paoli, Joao A. Paulo, J. Wade Harper +1 more

Early Endosome Capture Proteomics and its Application to Amyloid Precursor Protein Intramembrane Processing by β and γ-Secretases

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.31.486371

N/A

0DataRank · unranked

0 citations

Qing Yu, Frances V Hundley, Katherine A. Overmyer, Lia R. Serrano, Joao A. Paulo +6 more

PARK15/FBXO7 is dispensable for PINK1/Parkin mitophagy in iNeurons and HeLa cell systems

EMBO Reports(2023)10.15252/embr.202256399

N/A

0DataRank · unranked

35 citations

Ellen A. Goodall, Ian R. Smith, Yizhi Jiang, Julia C. Paoli, Frank Adolf +5 more

Combinatorial selective ER-phagy remodels the ER during neurogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.26.546565

N/A

0DataRank · unranked

4 citations

Cristina Capitanio, Ian R. Smith, Julia C. Paoli, Anna Bieber, Yizhi Jiang +7 more

Data from Bortezomib-Mediated Inhibition of Steroid Receptor Coactivator-3 Degradation Leads to Activated Akt

(2023)10.1158/1078-0432.c.6516892

N/A

0DataRank · unranked

0 citations

Jun Yan, Rile Li, Yi Ding, Timothy C. Thompson, Martha P. Mims +11 more

Data from Bortezomib-Mediated Inhibition of Steroid Receptor Coactivator-3 Degradation Leads to Activated Akt

(2023)10.1158/1078-0432.c.6516892.v1

N/A

0DataRank · unranked

0 citations

Jun Yan, Rile Li, Yi Ding, Timothy C. Thompson, Martha P. Mims +11 more

Analyzing ER stress response in ALS patient derived motor neurons identifies druggable neuroprotective targets

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.16.567279

N/A

0DataRank · unranked

0 citations

Richard M. Giadone, Alban Ordureau, Kristina M. Holton, J. Wade Harper, Lee L. Rubin +1 more

UFM1 E3 ligase promotes recycling of 60S ribosomal subunits from the ER

Nature(2024)10.1038/s41586-024-07073-0

N/A

0DataRank · unranked

54 citations

Ivan Penchev, Samantha C. Gumbin, Francesco Scavone, Magda Wąchalska, Joao A. Paulo +8 more

Visualizing chaperone-mediated multistep assembly of the human 20S proteasome

Nature Structural & Molecular Biology(2024)10.1038/s41594-024-01268-9

N/A

0DataRank · unranked

32 citations

Jiale Du, Ellen A. Goodall, Richard M. Walsh, Shaun Rawson, Susanne von Gronau +4 more

Principles of paralog-specific targeted protein degradation engaging the C-degron E3 KLHDC2

Nature Communications(2024)10.1038/s41467-024-52966-3

N/A

0DataRank · unranked

26 citations

Suresh Dharuman, Elizabeth C. Griffith, Sergio C. Chai, Jarrid Ronnebaum, Moeko T. King +17 more

Endo-IP and lyso-IP toolkit for endolysosomal profiling of human-induced neurons

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2419079121

N/A

0DataRank · unranked

22 citations

Miguel A. Gonzalez‐Lozano, Lena M. Gottschalk, Aslan N. K. Cook, Jiuchun Zhang, Joao A. Paulo +2 more

Structural basis for C-degron selectivity across KLHDCX family E3 ubiquitin ligases

Nature Communications(2024)10.1038/s41467-024-54126-z

N/A

0DataRank · unranked

13 citations

Sagar Chittori, Nicholas Purser, Moeko T. King, Samuel Maiwald, Kelly Churion +9 more

Systematic analysis of nonprogrammed frameshift suppression in E. coli via translational tiling proteomics

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2317453121

N/A

0DataRank · unranked

6 citations

Joao A. Paulo, Hankum Park, Kemardo Henry, Eleanor Fleming, Zoë A. Feder +3 more

Pharmacological PINK1 activation ameliorates Pathology in Parkinson’s Disease models

Research Square(2024)10.21203/rs.3.rs-4356493/v1

N/A

0DataRank · unranked

20 citations

R Chin, Rishi Rakhit, Dara Ditsworth, Chengzhong Wang, Johan Bartholomeus +18 more

Spatiotemporal proteomic profiling of cellular responses to NLRP3 agonists

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.19.590338

N/A

0DataRank · unranked

9 citations

Priya Veeraraghavan, Joao A. Paulo, J. Wade Harper, Louis Hollingsworth

Visualizing chaperone-mediated multistep assembly of the human 20S proteasome

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.27.577538

N/A

0DataRank · unranked

6 citations

Jiale Du, Ellen A. Goodall, Richard M. Walsh, Shaun Rawson, Susanne von Gronau +4 more

Endo-IP and Lyso-IP Toolkit for Endolysosomal Profiling of Human Induced Neurons

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.24.614704

N/A

0DataRank · unranked

1 citations

Miguel A. Gonzalez‐Lozano, Lena M. Gottschalk, Aslan N. K. Cook, Jiuchun Zhang, Joao A. Paulo +2 more

Global cellular proteo-lipidomic profiling of diverse lysosomal storage disease mutants using nMOST

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.26.586828

N/A

0DataRank · unranked

0 citations

Yuchen He, Sharan Swarup, Katherine A. Overmyer, Yizhi Jiang, Johann Brenner +15 more

Endosomal, lysosomal, mitochondrial, or Golgi immunoprecipitation for quantitative proteomics v1

(2024)10.17504/protocols.io.261ge5p57g47/v1

N/A

0DataRank · unranked

0 citations

Louis Hollingsworth, Chan Lee, J. Wade Harper

Functional conservation and divergence of the helix-turn-helix motif of E2 ubiquitin-conjugating enzymes

UNC Libraries(2024)10.17615/s94d-5j87

N/A

0DataRank · unranked

0 citations

Brenda Temple, Joshua P. Steimel, Li H. Gu, Anneroos E Nederstigt, Nicholas G. Brown +9 more

Ubiquitin chain-elongating enzyme UBE2S activates the RING E3 ligase APC/C for substrate priming

UNC Libraries(2024)10.17615/5fdn-2z74

N/A

0DataRank · unranked

0 citations

Tatyana Bodrug, Morgan E. Gibbs, Jan‐Michael Peters, Michael J. Emanuele, Jeanette Gowen Cook +10 more

Proximity-specific ribosome profiling reveals the logic of localized mitochondrial translation

Cell(2025)10.1016/j.cell.2025.08.002

N/A

0DataRank · unranked

36 citations

Stuti Khandwala, Jingjie Hu, Song-Yi Lee, Kelsey Hickey, Zebulon G. Levine +4 more

The network response to Egf is tissue-specific

iScience(2025)10.1016/j.isci.2025.112146

N/A

0DataRank · unranked

1 citations

Joao A. Paulo, Deborah L. Burkhart, Ian R. Smith, Ryan L. Collins, J. Wade Harper +3 more

A human lysosomal storage disorder toolkit for decoding proteome landscapes in cortical and dopaminergic-like induced neurons

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.08.681047

N/A

0DataRank · unranked

1 citations

Yuchen He, Yizhi Jiang, D. Li, Yohannes A Ambaw, Federico M. Gasparoli +7 more

The endoplasmic reticulum P5A-ATPase is a transmembrane helix dislocase

Science(2020)10.1126/science.abc5809

N/A

0DataRank · unranked

156 citations

Sue Sim, Alban Ordureau, Lianjie Wei, J. Wade Harper, Sichen Shao +2 more

Global Landscape and Dynamics of Parkin and USP30-Dependent Ubiquitylomes in iNeurons during Mitophagic Signaling

Molecular Cell(2020)10.1016/j.molcel.2019.11.013

N/A

0DataRank · unranked

225 citations

Joao A. Paulo, Jiuchun Zhang, Heeseon An, Kirby N. Swatek, Joe R. Cannon +4 more

Pathogenic Pathways in Early-Onset Autosomal Recessive Parkinson's Disease Discovered Using Isogenic Human Dopaminergic Neurons

Stem Cell Reports(2020)10.1016/j.stemcr.2019.12.005

N/A

0DataRank · unranked

63 citations

Alban Ordureau, Christina Bell, Lily Sarrafha, Chicheng Sun, Silvia Piccinotti +9 more

Quantitative intravital imaging reveals in vivo dynamics of physiological-stress induced mitophagy

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.26.010405

N/A

0DataRank · unranked

2 citations

Arkadi Shwartz, Jin‐Mi Heo, Eleanor D. Quenzer, Kyle A. LaBella, J. Wade Harper +2 more

Dual RING E3 Architectures Regulate Multiubiquitination and Ubiquitin Chain Elongation by APC/C

UNC Libraries(2020)10.17615/kssb-fk64

N/A

0DataRank · unranked

0 citations

David Yanishevski, Nicholas G. Brown, Darcie J. Miller, Brenda A. Schulman, M. Yamaguchi +24 more

Dual proteome-scale networks reveal cell-specific remodeling of the human interactome

Cell(2021)10.1016/j.cell.2021.04.011

N/A

0DataRank · unranked

1006 citations

Raphael J. Bruckner, José Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab +23 more

J. Wade Harper

Indexed papers

Top data-sharing exemplar

Papers