Tara Chari

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 12 papers. Top paper: “Whole-animal multiplexed single-cell RNA-seq reveals transcriptional shifts across Clytia medusa cell types”.

Whole-animal multiplexed single-cell RNA-seq reveals transcriptional shifts across Clytia medusa cell types

Science Advances(2021)10.1126/sciadv.abh1683

N/A

0DataRank · unranked

127 citations

Brandon Weissbourd, Jase Gehring, Anna Ferraioli, Lucas Leclère, Makenna Herl +7 more

Whole Animal Multiplexed Single-Cell RNA-Seq Reveals Plasticity of Clytia Medusa Cell Types

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.22.427844

N/A

0DataRank · unranked

9 citations

Brandon Weissbourd, Jase Gehring, Anna Ferraioli, Lucas Leclère, Makenna Herl +7 more

RNA velocity unraveled

PLoS Computational Biology(2022)10.1371/journal.pcbi.1010492

N/A

0DataRank · unranked

189 citations

Meichen Fang, Tara Chari, Lior Pachter, Gennady Gorin

Monod : model-based discovery and integration through fitting stochastic transcriptional dynamics to single-cell sequencing data

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.11.495771

N/A

0DataRank · unranked

18 citations

Tara Chari, Maria Carilli, John J. Vastola, Lior Pachter, Gennady Gorin

The specious art of single-cell genomics

PLoS Computational Biology(2023)10.1371/journal.pcbi.1011288

N/A

0DataRank · unranked

322 citations

Lior Pachter, Tara Chari

Efficient and accurate detection of viral sequences at single-cell resolution reveals putative novel viruses perturbing host gene expression

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.11.571168

N/A

0DataRank · unranked

7 citations

Delaney K. Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari +2 more

Biophysically Interpretable Inference of Cell Types from Multimodal Sequencing Data

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.17.558131

N/A

0DataRank · unranked

6 citations

Gennady Gorin, Lior Pachter, Tara Chari

Genome organization around nuclear speckles drives mRNA splicing efficiency

Nature(2024)10.1038/s41586-024-07429-6

N/A

0DataRank · unranked

162 citations

Amy Chow, Benjamin Emert, Olivia Ettlin, Sofia A. Quinodoz, Mackenzie Strehle +13 more

Spectral neural approximations for models of transcriptional dynamics

Biophysical Journal(2024)10.1016/j.bpj.2024.04.034

N/A

0DataRank · unranked

15 citations

Maria Carilli, Tara Chari, Lior Pachter, Gennady Gorin

Stochastic Modeling of Biophysical Responses to Perturbation

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.04.602131

N/A

0DataRank · unranked

0 citations

Gennady Gorin, Lior Pachter, Tara Chari

Detection of viral sequences at single-cell resolution identifies novel viruses associated with host gene expression changes

Nature Biotechnology(2025)10.1038/s41587-025-02614-y

N/A

0DataRank · unranked

11 citations

Delaney K. Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari +2 more

Monod: model-based discovery and integration through fitting stochastic transcriptional dynamics to single-cell sequencing data

Nature Methods(2025)10.1038/s41592-025-02832-x

N/A

0DataRank · unranked

6 citations

Tara Chari, Maria Carilli, John J. Vastola, Lior Pachter, Gennady Gorin