🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Hagen U. Tilgner

Cornell University

ORCID: 0000-0002-7058-3606

Also affiliated with MIND Research Institute, Weill Cornell Medicine

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
13.4Author DataRank

Indexed papers

5in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression

Genome Research(2012)10.1101/gr.132159.111
Top 2%
8.5DataRank
Top 2%5242 citations

Todd A. Johnson, Giovanni Bussotti, Andrea Tanzer, Sarah Djebali, Hagen U. Tilgner +26 more

Papers

Driven by 18 papers — median percentile 80. Top paper: “The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression”.

The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression

Genome Research(2012)10.1101/gr.132159.111
Top 2%
8.5DataRank
Top 2%5242 citations

Todd A. Johnson, Giovanni Bussotti, Andrea Tanzer, Sarah Djebali, Hagen U. Tilgner +26 more

Single-nuclei isoform RNA sequencing unlocks barcoded exon connectivity in frozen brain tissue

Nature Biotechnology(2022)10.1038/s41587-022-01231-3
N/A
2.8DataRank · unranked
133 citations

Wen Hu, Anoushka Joglekar, Li Fan, Paul Collier, Careen Foord +25 more

Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

Nature Methods(2024)10.1038/s41592-024-02298-3
Top 8%
2.8DataRank
Top 8%216 citations

Dingjie Wang, Fairlie Reese, Mark Diekhans, Sílvia Carbonell Sala, Brian A. Williams +80 more

Landscape of transcription in human cells

Nature(2012)10.1038/nature11233
N/A
1.3DataRank · unranked
5354 citations

Qi Dai, Angelika Merkel, Timo Lassmann, Shinichi Morishita, Andrea Tanzer +91 more

Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.25.550582
Top 20%
0.991DataRank
Top 20%28 citations

Dingjie Wang, Fairlie Reese, Mark Diekhans, Sílvia Carbonell Sala, Brian A. Williams +78 more

Deep sequencing of subcellular RNA fractions shows splicing to be predominantly co-transcriptional in the human genome but inefficient for lncRNAs

Genome Research(2012)10.1101/gr.134445.111
N/A
0.931DataRank · unranked
496 citations

David G. Knowles, Todd A. Johnson, Qi Dai, Sudipto Chakrabortty, Sarah Djebali +7 more

A guide to the BRAIN Initiative Cell Census Network data ecosystem

PLoS Biology(2023)10.1371/journal.pbio.3002133
Top 24%
0.845DataRank
Top 24%56 citations

Maryann E. Martone, Giorgio A. Ascoli, Jan G. Bjaalie, Hong‐Wei Dong, Satrajit S. Ghosh +95 more

Single-cell long-read sequencing-based mapping reveals specialized splicing patterns in developing and adult mouse and human brain

Nature Neuroscience(2024)10.1038/s41593-024-01616-4
N/A
0.701DataRank · unranked
106 citations

Wen Hu, Bei Zhang, Oleksandr Narykov, Mark Diekhans, Jordan Marrocco +10 more

The single-cell opioid responses in the context of HIV (SCORCH) consortium

Molecular Psychiatry(2024)10.1038/s41380-024-02620-7
N/A
0.526DataRank · unranked
16 citations

Rianne R. Campbell, Mary Kay Lobo, Joseph P. Receveur, Kriti Agrawal, Alejandra Borjabad +81 more

Single-cell long-read mRNA isoform regulation is pervasive across mammalian brain regions, cell types, and development

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.02.535281
N/A
0.406DataRank · unranked
14 citations

Wen Hu, Bei Zhang, Oleksandr Narykov, Mark Diekhans, Jennifer Balacco +9 more

The BRAIN Initiative Cell Census Network Data Ecosystem: A User’s Guide

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.26.513573
Top 54%
0.312DataRank
Top 54%7 citations

Maryann E. Martone, Patrick R. Hof, Ed S. Lein, Aviv Regev, Giorgio A. Ascoli +94 more

A single-cell, long-read, isoform-resolved case-control study of FTD reveals cell-type-specific and broad splicing dysregulation in human brain

Cell Reports(2025)10.1016/j.celrep.2025.116198
N/A
0.295DataRank · unranked
6 citations

Wen Hu, Li Fan, Anoushka Joglekar, Yi He, Careen Foord +25 more

NRCAM variant defined by microexon skipping is a targetable cell surface proteoform in high-grade gliomas

Cell Reports(2025)10.1016/j.celrep.2025.116099
N/A
0DataRank · unranked
5 citations

Ammar S. Naqvi, Makenna Higgins, Jia‐Geng Liu, Kyra Harvey, Julien Jarroux +25 more

Understanding isoform expression by pairing long-read sequencing with single-cell and spatial transcriptomics

Genome Research(2024)10.1101/gr.279640.124
N/A
0DataRank · unranked
20 citations

Justine Hsu, X. Li, Julien Jarroux, Wen Hu, Anoushka Joglekar +2 more

Targeted DNA-seq and RNA-seq of Reference Samples with Short-read and Long-read Sequencing

Scientific Data(2024)10.1038/s41597-024-03741-y
N/A
0DataRank · unranked
9 citations

Dan Li, Paweł P. Łabaj, Bohu Pan, Natalia Novoradovskaya, Danielle Thierry‐Mieg +20 more

cloudrna SP Ades : isoform assembly using bulk barcoded RNA sequencing data

Bioinformatics(2024)10.1093/bioinformatics/btad781
N/A
0DataRank · unranked
0 citations

Andrey D. Prjbelski, Mikhail Raiko, Alexandru I. Tomescu, Hagen U. Tilgner, Iman Hajirasouliha +1 more

A spatial long-read approach at near-single-cell resolution reveals developmental regulation of splicing and polyadenylation sites in distinct cortical layers and cell types

Nature Communications(2025)10.1038/s41467-025-63301-9
N/A
0DataRank · unranked
13 citations

Andrey D. Prjibelski, Wen Hu, Lieke Michielsen, Andrea Vandelli, Oleksandr Narykov +12 more

Augmenting precision medicine via targeted RNA-Seq detection of expressed mutations

npj Precision Oncology(2025)10.1038/s41698-025-00993-8
N/A
0DataRank · unranked
5 citations

Jianying Li, Donald J. Johann, Daniel Butler, Guangchun Chen, Jonathan Foox +20 more