Wenshe Ray Liu

Pharmaceutical Research and Manufacturers of America

Also affiliated with Institute of Rural Management Anand, Texas College, Mitchell Institute, Texas A&M Health Science Center, Drug Discovery Laboratory (Norway), Pediatrics and Genetics, Texas A&M University

Biochemistry, Genetics and Molecular BiologyMedicineChemistry

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 40 papers. Top paper: “Self-Masked Aldehyde Inhibitors: A Novel Strategy for Inhibiting Cysteine Proteases”.

Self-Masked Aldehyde Inhibitors: A Novel Strategy for Inhibiting Cysteine Proteases

Journal of Medicinal Chemistry(2021)10.1021/acs.jmedchem.1c00628

N/A

1.2DataRank · unranked

37 citations

Balachandra Chenna, Kai S. Yang, Taylor R. Cole, Zachary Goodall, Miriam A. Giardini +19 more

A Quick Route to Multiple Highly Potent SARS‐CoV‐2 Main Protease Inhibitors**

ChemMedChem(2020)10.1002/cmdc.202000924

N/A

0.736DataRank · unranked

134 citations

R. Xinyu, Yuying Ma, Yugendar R. Alugubelli, Danielle A. Scott, Erol C. Vatansever +17 more

Novel Regioselective Approach to Cyclize Phage-Displayed Peptides in Combination with Epitope-Directed Selection to Identify a Potent Neutralizing Macrocyclic Peptide for SARS-CoV-2

ACS Chemical Biology(2022)10.1021/acschembio.2c00565

N/A

0.477DataRank · unranked

23 citations

Tyler Lalonde, Jeffery M. Tharp, Yadagiri Kurra, Yugendar R. Alugubelli, Christopher M. Roundy +4 more

Taf2 mediates DNA binding of Taf14

Nature Communications(2022)10.1038/s41467-022-30937-w

N/A

0.360DataRank · unranked

10 citations

Jordan T. Feigerle, Jibo Zhang, Christopher C. Ebmeier, Lixin Fan, Rohit K. Singh +10 more

Bepridil is potent against SARS-CoV-2 In Vitro

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.23.112235

N/A

0DataRank · unranked

30 citations

Kai S. Yang, Kaci C. Kratch, Aleksandra Drelich, Chia-Chuan Cho, Drake M. Mellott +4 more

A Speedy Route to Multiple Highly Potent SARS-CoV-2 Main Protease Inhibitors

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.28.223784

N/A

0DataRank · unranked

10 citations

R. Xinyu, Yuying Ma, Yugendar R. Alugubelli, Danielle A. Scott, Erol C. Vatansever +17 more

Site-Specific Conversion of Cysteine in a Protein to Dehydroalanine Using 2-Nitro-5-thiocyanatobenzoic Acid

Molecules(2021)10.3390/molecules26092619

N/A

0DataRank · unranked

13 citations

Ge Yu, Sunshine Z. Leeuwon, Wenshe Ray Liu, Yuchen Qiao

The P3 O - Tert -Butyl-Threonine is Key to High Cellular and Antiviral Potency for Aldehyde-Based SARS-CoV-2 Main Protease Inhibitors

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.18.473326

N/A

0DataRank · unranked

3 citations

Kai S. Yang, Zhi Geng, Yugendar R. Alugubelli, Namir Shaabani, Erol C. Vatansever +12 more

The Effects of Site Specific Histone Modifications on Nucleosomal DNA Accessibility

The FASEB Journal(2021)10.1096/fasebj.2021.35.s1.02076

N/A

0DataRank · unranked

0 citations

Wenshe Ray Liu, Chesley Marie Rowlett

A systematic exploration of boceprevir-based main protease inhibitors as SARS-CoV-2 antivirals

European Journal of Medicinal Chemistry(2022)10.1016/j.ejmech.2022.114596

N/A

0DataRank · unranked

55 citations

Zhi Geng, Kai S. Yang, Namir Shaabani, Kaustav Khatua, R. Xinyu +13 more

A multi-pronged evaluation of aldehyde-based tripeptidyl main protease inhibitors as SARS-CoV-2 antivirals

European Journal of Medicinal Chemistry(2022)10.1016/j.ejmech.2022.114570

N/A

0DataRank · unranked

43 citations

Kai S. Yang, Zhi Geng, Yugendar R. Alugubelli, Namir Shaabani, Erol C. Vatansever +13 more

Resveratrol Binds Nuclear Receptor 4A1 (NR4A1) and Acts as an NR4A1 Antagonist in Lung Cancer Cells

Molecular Pharmacology(2022)10.1124/molpharm.121.000481

N/A

0DataRank · unranked

27 citations

Greg Martin, Kumaravel Mohankumar, J. Trae Hampton, Wenshe Ray Liu, Stephen Safe +1 more

The Pyrrolysyl-tRNA Synthetase Activity can be Improved by a P188 Mutation that Stabilizes the Full-Length Enzyme

Journal of Molecular Biology(2022)10.1016/j.jmb.2022.167453

N/A

0DataRank · unranked

20 citations

Lauren R. Blankenship, Xinyu Ma, Shiqing Xu, Wenshe Ray Liu, Chia-Chuan Cho

Repurposing Halicin as a potent covalent inhibitor for the SARS-CoV-2 main protease

Current Research in Chemical Biology(2022)10.1016/j.crchbi.2022.100025

N/A

0DataRank · unranked

17 citations

Syuan‐Ting Kuo, Lauren R. Blankenship, Zhi Geng, Shuhua G. Li, David H. Russell +4 more

A Designed, Highly Efficient Pyrrolysyl-tRNA Synthetase Mutant Binds o-Chlorophenylalanine Using Two Halogen Bonds

Journal of Molecular Biology(2022)10.1016/j.jmb.2022.167534

N/A

0DataRank · unranked

15 citations

Kai S. Yang, Zhi Geng, Yuchen Qiao, Pingwei Li, Shiqing Xu +2 more

Phage‐assisted , active site‐directed ligand evolution of a potent and selective histone deacetylase 8 inhibitor

Protein Science(2022)10.1002/pro.4512

N/A

0DataRank · unranked

10 citations

Yan Sheng, J. Trae Hampton, Lauralee D. Sylvain, Sukant Kishore Das, Yugendar R. Alugubelli +6 more

A Novel Y-Shaped, S-O-N-O-S-Bridged Crosslink between Three Residues C22, C44, and K61 Is a Redox Switch of the SARS-CoV-2 Main Protease

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.29.490044

N/A

0DataRank · unranked

3 citations

Syuan‐Ting Kuo, Lauren R. Blankenship, Yan Sheng, Banumathi Sankaran, Pingwei Li +6 more

The Prioritization of Eleven-Nineteen-Leukemia Inhibitors as Potential Drug Candidates to Treat Acute Myeloid Leukemia

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.07.519474

N/A

0DataRank · unranked

2 citations

Peng‐Hsun Chase Chen, Shiqing Xu, Wenshe Ray Liu, Xuejiao Shirley Guo

A Novel Regioselective Approach to Cyclize Phage-Displayed Peptides in Combination with Epitope-Directed Selection to Identify a Potent Neutralizing Macrocyclic Peptide for SARS-CoV-2

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.06.498864

N/A

0DataRank · unranked

1 citations

Tyler Lalonde, Jeffery M. Tharp, Yadagiri Kurra, Yugendar R. Alugubelli, Christopher M. Roundy +4 more

Phage-Assisted, Active Site-Directed Ligand Evolution of a Potent and Selective Histone Deacetylase 8 Inhibitor

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.14.508049

N/A

0DataRank · unranked

1 citations

Yan Sheng, J. Trae Hampton, Lauralee D. Sylvain, Sukant Kishore Das, Yugendar R. Alugubelli +6 more

An Amber-Encoding Helper Phage for More Efficient Phage Display of Noncanonical Amino Acids

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.19.521047

N/A

0DataRank · unranked

0 citations

Chia-Chuan Dean Cho, Zhi Geng, Demonta D. Coleman, Peng‐Hsun Chase Chen, Gopal K. Dubey +4 more

A Systematic Survey of Reversibly Covalent Dipeptidyl Inhibitors of the SARS-CoV-2 Main Protease

Journal of Medicinal Chemistry(2023)10.1021/acs.jmedchem.3c00221

N/A

0DataRank · unranked

25 citations

Sandeep Atla, Namir Shaabani, Veerabhadra R. Vulupala, Kai S. Yang, Yugendar R. Alugubelli +13 more

An amber-encoding helper phage for more efficient phage display of noncanonical amino acids

Nucleic Acids Research(2023)10.1093/nar/gkad488

N/A

0DataRank · unranked

15 citations

Chia-Chuan Dean Cho, Demonta D. Coleman, Zhi Geng, Peng‐Hsun Chase Chen, G.K. Dubey +4 more

Discovery of First-in-Class PROTAC Degraders of SARS-CoV-2 Main Protease

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.29.560163

N/A

0DataRank · unranked

9 citations

Jing Xiao, Kaustav Khatua, Sathish Kumar, Yuying Ma, R. Xinyu +8 more

A Systematic Survey of Reversibly Covalent Dipeptidyl Inhibitors of the SARS-CoV-2 Main Protease

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.17.524469

N/A

0DataRank · unranked

4 citations

Sandeep Atla, Namir Shaabani, Veerabhadra R. Vulupala, Kai S. Yang, Yugendar R. Alugubelli +13 more

An Azapeptide Platform in Conjunction with Covalent Warheads to Uncover High-Potency Inhibitors for SARS-CoV-2 Main Protease

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.11.536467

N/A

0DataRank · unranked

3 citations

Yugendar R. Alugubelli, Kai S. Yang, Veerabhadra R. Vulupala, Lauren R. Blankenship, Demonta Coleman +14 more

Discovery of First-in-Class PROTAC Degraders of SARS-CoV-2 Main Protease

Journal of Medicinal Chemistry(2024)10.1021/acs.jmedchem.3c02416

N/A

0DataRank · unranked

75 citations

Jing Xiao, Kaustav Khatua, Sathish Kumar, Long Sun, Yuying Ma +10 more

Diversification of Phage-Displayed Peptide Libraries with Noncanonical Amino Acid Mutagenesis and Chemical Modification

Chemical Reviews(2024)10.1021/acs.chemrev.4c00004

N/A

0DataRank · unranked

65 citations

Wenshe Ray Liu, J. Trae Hampton

SARS-CoV-2 Main Protease Inhibitors That Leverage Unique Interactions with the Solvent Exposed S3 Site of the Enzyme

ACS Medicinal Chemistry Letters(2024)10.1021/acsmedchemlett.4c00146

N/A

0DataRank · unranked

12 citations

Kai S. Yang, Veerabhadra R. Vulupala, Yugendar R. Alugubelli, Kaustav Khatua, Demonta Coleman +8 more

Azapeptides with unique covalent warheads as SARS-CoV-2 main protease inhibitors

Antiviral Research(2024)10.1016/j.antiviral.2024.105874

N/A

0DataRank · unranked

11 citations

Yugendar R. Alugubelli, Kai S. Yang, Veerabhadra R. Vulupala, Lauren R. Blankenship, Demonta Coleman +15 more

BRD4354 Is a Potent Covalent Inhibitor against the SARS-CoV-2 Main Protease

Biochemistry(2024)10.1021/acs.biochem.3c00685

N/A

0DataRank · unranked

1 citations

Syuan‐Ting Kuo, Tingyuan Yang, Hanyuan Zhang, David H. Russell, Xin Yan +4 more

2-Cyanopyrimidine-Containing Molecules for N-Terminal Selective Cyclization of Phage-Displayed Peptides

ACS Chemical Biology(2025)10.1021/acschembio.4c00725

N/A

0DataRank · unranked

9 citations

Connor R. Dobie, Demonta D. Coleman, Mahmoud Cherif, Sukant Kishore Das, Wenshe Ray Liu +1 more

Ubiquitin Azapeptide Esters as Next-Generation Activity-Based Probes for Cysteine Enzymes in the Ubiquitin Signal Pathway

Journal of the American Chemical Society(2025)10.1021/jacs.5c01732

N/A

0DataRank · unranked

8 citations

Sandeep Atla, Xinlei Sheng, Satyanarayana Nyalata, Yugendar R. Alugubelli, Demonta Coleman +7 more

Epigenetic reader chromodomain as a potential therapeutic target

RSC Chemical Biology(2025)10.1039/d4cb00324a

N/A

0DataRank · unranked

5 citations

J. Trae Hampton, Tatiana G. Kutateladze, Wenshe Ray Liu, Shivangi Sharma

Development of Chemical Tools for the Human YEATS Domain

ACS Chemical Biology(2025)10.1021/acschembio.5c00349

N/A

0DataRank · unranked

3 citations

Abdalrahman Khalifa, Karthik Selvam, Tatiana G. Kutateladze, Wenshe Ray Liu, Xuejiao Shirley Guo

A Simple, Quick, and Scalable Route to Fluorogenic Ubiquitin and Ubiquitin-Like Protein Substrates for Assessing Activities of Deubiquitinases and Ubiquitin-Like Protein-Specific Proteases

ACS Chemical Biology(2025)10.1021/acschembio.5c00446

N/A

0DataRank · unranked

2 citations

Alan Pham, Yifan Shi, Sandeep Atla, Wenshe Ray Liu, Saibal Chanda

Mycobacterium tuberculosis fluorescent and bioluminescent imaging technologies: addressing the issue of sensitivity

Expert Review of Respiratory Medicine(2025)10.1080/17476348.2025.2581338

N/A

0DataRank · unranked

0 citations

Aaron B. Benjamin, Hatice Ceylan Koydemir, Wenshe Ray Liu, Jeffrey D. Cirillo, Amanda C. Zangirolami

Expressed Protein Ligation without Intein

Journal of the American Chemical Society(2020)10.1021/jacs.0c00252

N/A

0DataRank · unranked

49 citations

Ge Yu, Kaci C. Kratch, Xiaoyan Aria Wang, Wesley W. Wang, Sunshine Z. Leeuwon +4 more

An optimal “Click” formulation strategy for antibody-drug conjugate synthesis

Bioorganic & Medicinal Chemistry(2020)10.1016/j.bmc.2020.115808

N/A

0DataRank · unranked

13 citations

Jeffrey Kang, Alfred Tuley, E. Sally Ward, Wenshe Ray Liu, Erol C. Vatansever

An amber obligate active site-directed ligand evolution technique for phage display

Nature Communications(2020)10.1038/s41467-020-15057-7

N/A

0DataRank · unranked

46 citations

J. Trae Hampton, Catrina A. Reed, Andreas Ehnbom, Peng‐Hsun Chase Chen, Jared S. Morse +5 more