🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Cristin McCabe

Broad Institute

ORCID: 0000-0002-7209-7847

Also affiliated with Klarman Cell Observatory

Biochemistry, Genetics and Molecular BiologyNeuroscience

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
10.4Author DataRank

Indexed papers

4in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A molecular network of the aging human brain provides insights into the pathology and cognitive decline of Alzheimer’s disease

Nature Neuroscience(2018)10.1038/s41593-018-0154-9
Top 4%
5.2DataRank
Top 4%584 citations

Chris Gaiteri, Sarah E. Sullivan, Charles C. White, Shinya Tasaki, Jishu Xu +17 more

Papers

Driven by 25 papers — median percentile 89. Top paper: “COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets”.

COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets

Nature(2021)10.1038/s41586-021-03570-8
N/A
10.7DataRank · unranked
879 citations

Carly G.K. Ziegler, Graham Heimberg, Rachelly Normand, Yiming Yang, Åsa Segerstolpe +95 more

A molecular network of the aging human brain provides insights into the pathology and cognitive decline of Alzheimer’s disease

Nature Neuroscience(2018)10.1038/s41593-018-0154-9
Top 4%
5.2DataRank
Top 4%584 citations

Chris Gaiteri, Sarah E. Sullivan, Charles C. White, Shinya Tasaki, Jishu Xu +17 more

Genetic analysis of isoform usage in the human anti-viral response reveals influenza-specific regulation of ERAP2 transcripts under balancing selection

Genome Research(2018)10.1101/gr.240390.118
N/A
2.3DataRank · unranked
78 citations

Jenny Chen, Rachel E. Gate, Meena Subramaniam, Tushar Bhangale, Mark N. Lee +18 more

Cell subtype-specific effects of genetic variation in the Alzheimer’s disease brain

Nature Genetics(2024)10.1038/s41588-024-01685-y
Top 9%
2.3DataRank
Top 9%179 citations

Zongmei Gao, Lu Zeng, Cristin McCabe, Charles C. White, Bernard Ng +22 more

A cellular and spatial map of the choroid plexus across brain ventricles and ages

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/627539
Top 12%
1.7DataRank
Top 12%45 citations

Rebecca H. Herbst, Naomi Habib, Danielle Dionne, Cristin McCabe, Jin Cui +11 more

Multicellular communities are perturbed in the aging human brain and Alzheimer’s disease

Nature Neuroscience(2023)10.1038/s41593-023-01356-x
N/A
1.7DataRank · unranked
107 citations

Mariko Taga, Cristin McCabe, Gilad S. Green, Idan Hekselman, Charles C. White +12 more

SnFFPE-Seq: towards scalable single nucleus RNA-Seq of formalin-fixed paraffin-embedded (FFPE) tissue

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.25.505257
N/A
1.3DataRank · unranked
28 citations

Alexandre Melnikov, Cristin McCabe, Eugene Drokhlyansky, Nicholas Van Wittenberghe, Emma M. Magee +7 more

Atlas of RNA editing events affecting protein expression in aged and Alzheimer’s disease human brain tissue

Nature Communications(2021)10.1038/s41467-021-27204-9
Top 18%
1.2DataRank
Top 18%62 citations

Eric B. Dammer, Daniel Felsky, Duc M. Duong, Hans‐Ulrich Klein, Charles C. White +17 more

Disease-associated astrocytes in Alzheimer’s disease and aging

Nature Neuroscience(2020)10.1038/s41593-020-0624-8
N/A
1.0DataRank · unranked
1000 citations

Cristin McCabe, Sedi Medina, Miriam Varshavsky, Daniel Kitsberg, Raz Dvir-Szternfeld +11 more

Alzheimer's disease: early alterations in brain DNA methylation at ANK1, BIN1, RHBDF2 and other loci

Nature Neuroscience(2014)10.1038/nn.3786
N/A
1.0DataRank · unranked
999 citations

Gyan Srivastava, Katie Lunnon, Jeremy Burgess, Leonard C. Schalkwyk, Lei Yu +27 more

Polarization of the Effects of Autoimmune and Neurodegenerative Risk Alleles in Leukocytes

Science(2014)10.1126/science.1249547
N/A
0.948DataRank · unranked
556 citations

Sara Mostafavi, Chun Jimmie Ye, Mark N. Lee, Joseph M. Replogle, Ting Feng +22 more

A cellular and spatial map of the choroid plexus across brain ventricles and ages

Cell(2021)10.1016/j.cell.2021.04.003
N/A
0.886DataRank · unranked
366 citations

Rebecca H. Herbst, Cristin McCabe, Gilad S. Green, Karol Kaiser, Joshua P. Head +18 more

Cellular dynamics across aged human brains uncover a multicellular cascade leading to Alzheimer’s disease

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.07.531493
N/A
0.854DataRank · unranked
44 citations

Wayne N. Frankel, Mariko Taga, Cristin McCabe, Anael Cain, Charles C. White +10 more

Intersection of population variation and autoimmunity genetics in human T cell activation

Science(2014)10.1126/science.1254665
N/A
0.837DataRank · unranked
264 citations

Ting Feng, Ho-Keun Kwon, Towfique Raj, Michael T. Wilson, Natasha Asinovski +14 more

Cell-subtype specific effects of genetic variation in the aging and Alzheimer cortex

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.07.515446
N/A
0.808DataRank · unranked
35 citations

Zongmei Gao, Lu Zeng, Cristin McCabe, Charles C. White, Bernard Ng +22 more

Nuclei multiplexing with barcoded antibodies for single-nucleus genomics

Nature Communications(2019)10.1038/s41467-019-10756-2
N/A
0.803DataRank · unranked
211 citations

Bo Li, Cristin McCabe, Abigail Knecht, Yiming Yang, Eugene Drokhlyansky +11 more

Cellular communities reveal trajectories of brain ageing and Alzheimer’s disease

Nature(2024)10.1038/s41586-024-07871-6
N/A
0.776DataRank · unranked
175 citations

Masashi Fujita, Hyun‐Sik Yang, Mariko Taga, Anael Cain, Cristin McCabe +13 more

Multi-region brain transcriptomes uncover two subtypes of aging individuals with differences in Alzheimer risk and the impact of APOEε4

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.25.524961
N/A
0.406DataRank · unranked
14 citations

Yiyi Ma, Lei Yu, Robert J. Dawe, Cristin McCabe, Konstantinos Arfanakis +5 more

Genetic analysis of isoform usage in the human anti-viral response reveals influenza-specific regulation of ERAP2 transcripts under balancing selection

bioRxiv (Cold Spring Harbor Laboratory)(2017)10.1101/188961
N/A
0.305DataRank · unranked
3 citations

Jenny Chen, Rachel E. Gate, Meena Subramaniam, Tushar Bhangale, Mark N. Lee +18 more

Nuclei multiplexing with barcoded antibodies for single-nucleus genomics

bioRxiv (Cold Spring Harbor Laboratory)(2018)10.1101/476036
N/A
0.208DataRank · unranked
3 citations

Bo Li, Cristin McCabe, Abigail Knecht, Eugene Drokhlyansky, Nicholas Van Wittenberghe +10 more

HTAPP_EZ Nuclei Isolation from frozen tissue v1

(2019)10.17504/protocols.io.4j9gur6
N/A
0DataRank · unranked
0 citations

Cristin McCabe, Eugene Drokhlyansky, Orit Rozenblatt–Rosen, Prisca Liberali, Orit Rozenblatt‐Rosen +1 more

DISCO-seq: 3D single-cell transcriptomics of intact biological systems

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.64898/2025.12.10.693352
N/A
0DataRank · unranked
0 citations

Laurent H.A. Simons, Louis Benedikt Kuemmerle, Cristin McCabe, Sophie Jansen, Zhisong He +20 more

Author Correction: Nuclei multiplexing with barcoded antibodies for single-nucleus genomics

Nature Communications(2020)10.1038/s41467-020-19357-w
N/A
0DataRank · unranked
0 citations

Bo Li, Cristin McCabe, Abigail Knecht, Yiming Yang, Eugene Drokhlyansky +11 more

Correction of age-associated defects in dendritic cells enables CD4+ T cells to eradicate tumors

Cell(2024)10.1016/j.cell.2024.05.026
N/A
0DataRank · unranked
84 citations

Stephanie N. Kennedy, J. Park, Francesco Boriello, Pascal Devant, Anh Cao +10 more

Human immunodeficiency virus and antiretroviral therapies exert distinct influences across diverse gut microbiomes

Nature Microbiology(2025)10.1038/s41564-025-02157-7
N/A
0DataRank · unranked
5 citations

Sambhawa Priya, Jiawu Xu, Upasana Das Adhikari, Gleb Pishchany, Ahmed M. Mohamed +13 more