Andrew S. Allen

Also affiliated with Duke Medical Center, Center for Genomic Science, Duke University Hospital, Applied Genetic Technologies (United States), Genetic Technologies (Australia)

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 30 papers. Top paper: “Genic Intolerance to Functional Variation and the Interpretation of Personal Genomes”.

Genic Intolerance to Functional Variation and the Interpretation of Personal Genomes

PLoS Genetics(2013)10.1371/journal.pgen.1003709

N/A

1.0DataRank · unranked

991 citations

Quanli Wang, Erin L. Heinzen, Andrew S. Allen, David B. Goldstein, Slavé Petrovski

The Intolerance of Regulatory Sequence to Genetic Variation Predicts Gene Dosage Sensitivity

PLOS Genetics(2015)10.1371/journal.pgen.1005492

N/A

0.739DataRank · unranked

137 citations

Ayal B. Gussow, Quanli Wang, Matt Halvorsen, Yujun Han, William H. Weir +4 more

Correction: Genic Intolerance to Functional Variation and the Interpretation of Personal Genomes

PLoS Genetics(2013)10.1371/annotation/32c8d343-9e1d-46c6-bfd4-b0cd3fb7a97e

N/A

0.680DataRank · unranked

92 citations

Quanli Wang, Erin L. Heinzen, Andrew S. Allen, David B. Goldstein, SlavÃ© Petrovski

Secondary analysis of case‐control association studies: Insights on weighting‐based inference motivate a new specification test

Statistics in Medicine(2020)10.1002/sim.8579

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0DataRank · unranked

2 citations

Andrew S. Allen, Fan Li

De Novo Mutation in an Enhancer of EBF3 in simplex autism

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.28.270751

N/A

0DataRank · unranked

2 citations

Tristan J. Hayeck, Brandon J. Mannion, Sumantra Chatterjee, Marta Byrska-Bishop, Rajeeva Musunuri +16 more

Targeted long-read sequencing identifies missing disease-causing variation

The American Journal of Human Genetics(2021)10.1016/j.ajhg.2021.06.006

N/A

0DataRank · unranked

242 citations

Arvis Sulovari, Tianyun Wang, Hailey Loucks, Kendra Hoekzema, Katherine M. Munson +45 more

Sub-genic intolerance, ClinVar, and the epilepsies: A whole-exome sequencing study of 29,165 individuals

The American Journal of Human Genetics(2021)10.1016/j.ajhg.2021.04.009

N/A

0DataRank · unranked

60 citations

Gundula Povysil, Ryan S. Dhindsa, Kate E. Stanley, Andrew S. Allen, Yen‐Chen Anne Feng +95 more

Coding and noncoding variants in EBF3 are involved in HADDS and simplex autism

Human Genomics(2021)10.1186/s40246-021-00342-3

N/A

0DataRank · unranked

35 citations

Tristan J. Hayeck, Zhang Cheng, Sumantra Chatterjee, Brandon J. Mannion, Marta Byrska-Bishop +30 more

A Bayesian hierarchical model to estimate DNA methylation conservation in colorectal tumors

Bioinformatics(2021)10.1093/bioinformatics/btab637

N/A

0DataRank · unranked

7 citations

Yanlin Ma, Lidea Shahidi, Sayan Mukherjee, Andrew S. Allen, Darryl Shibata +2 more

General Marginal Regression Models for the Joint Modeling of Event Frequency and Correlated Severities with Applications to Clinical Trials

Journal of Data Science(2021)10.6339/jds.2005.03(2).195

N/A

0DataRank · unranked

3 citations

Huiman X. Barnhart, Andrew S. Allen

Correcting signal biases and detecting regulatory elements in STARR-seq data

Genome Research(2021)10.1101/gr.269209.120

N/A

0DataRank · unranked

22 citations

Graham D. Johnson, Jungkyun Seo, Alejandro Barrera, Thomas Cowart, William H. Majoros +4 more

Genome-wide annotation of gene regulatory elements linked to cell fitness

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.08.434470

N/A

0DataRank · unranked

14 citations

Tyler S. Klann, Alejandro Barrera, Adarsh R. Ettyreddy, Siyan Liu, Ryan Rickels +10 more

DYNATE: Localizing Rare-Variant Association Regions via Multiple Testing Embedded in an Aggregation Tree

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.01.518706

N/A

0DataRank · unranked

0 citations

John Pura, Andrew S. Allen, Kouros Owzar, Jianfeng Lu, Matthew Harms +2 more

Transcriptional and epigenetic regulators of human CD8+ T cell function identified through orthogonal CRISPR screens

Nature Genetics(2023)10.1038/s41588-023-01554-0

N/A

0DataRank · unranked

81 citations

Adam M. Swartz, Michael C. Brown, Alejandro Barrera, Christian McRoberts Amador, Keith Siklenka +9 more

Genome-wide identification and phenotypic characterization of seizure-associated copy number variations in 741,075 individuals

Nature Communications(2023)10.1038/s41467-023-39539-6

N/A

0DataRank · unranked

56 citations

David Lewis‐Smith, Ryan L. Collins, Lisa‐Marie Niestroj, Shridhar Parthasarathy, Julie Xian +94 more

Ultra-rare genetic variation in relapsing polychondritis: a whole-exome sequencing study

Annals of the Rheumatic Diseases(2023)10.1136/ard-2023-224732

N/A

0DataRank · unranked

10 citations

Marcela A. Ferrada, Keith A. Sikora, Cameron Rankin, Hugh Alessi, Daniel L. Kastner +7 more

Single-nucleus DNA sequencing reveals hidden somatic loss-of-heterozygosity in Cerebral Cavernous Malformations

Nature Communications(2023)10.1038/s41467-023-42908-w

N/A

0DataRank · unranked

11 citations

Daniel Snellings, Romuald Girard, Carol J. Gallione, Rhonda Lightle, Andrew S. Allen +3 more

DYNATE: Localizing rare‐variant association regions via multiple testing embedded in an aggregation tree

Genetic Epidemiology(2023)10.1002/gepi.22542

N/A

0DataRank · unranked

1 citations

John Pura, Andrew S. Allen, Kouros Owzar, Jianfeng Lu, Matthew Harms +2 more

Promoter Deletion Leading to Allele Specific Expression in a Genetically Unsolved Case of Primary Ciliary Dyskinesia

American Journal of Medical Genetics Part A(2024)10.1002/ajmg.a.63880

N/A

0DataRank · unranked

1 citations

Weining Yin, Amanda Smith, Patrick R. Sears, Margaret W. Leigh, Thomas W. Ferkol +20 more

Characterization and bioinformatic filtering of ambient gRNAs in single-cell CRISPR screens using CLEANSER

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.04.611293

N/A

0DataRank · unranked

2 citations

Marisa C. Hamilton, Thomas Cowart, Alejandro Barrera, Lexi R. Bounds, Alexander C. Nelson +6 more

Characterization and bioinformatic filtering of ambient gRNAs in single-cell CRISPR screens using CLEANSER

Cell Genomics(2025)10.1016/j.xgen.2025.100766

N/A

0DataRank · unranked

6 citations

Marisa C. Hamilton, Thomas Cowart, Alejandro Barrera, Lexi R. Bounds, Alexander C. Nelson +8 more

Bayesian estimation of allele-specific expression in the presence of phasing uncertainty

Bioinformatics(2025)10.1093/bioinformatics/btaf283

N/A

0DataRank · unranked

2 citations

Zachary W. Gomez, Timothy E. Reddy, Andrew S. Allen, William H. Majoros, Xue Zou

Defining the Habitome: Phenotypes of Routine and Their Relationship to Health Outcomes

Research Square(2025)10.21203/rs.3.rs-5861743/v2

N/A

0DataRank · unranked

1 citations

Leeor Hershkovich, Hayoung Jeong, Shun Sakai, Harrison Kane, Andrew S. Allen +2 more

Defining the Habitome: Phenotypes of Routine and Their Relationship to Health Outcomes

Research Square(2025)10.21203/rs.3.rs-5861743/v1

N/A

0DataRank · unranked

0 citations

Leeor Hershkovich, Hayoung Jeong, Shun Sakai, Harrison Kane, Andrew S. Allen +2 more

Cell Modeling and Rescue of a Novel Non-coding Genetic Cause of Glycogen Storage Disease IX

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.14.654043

N/A

0DataRank · unranked

0 citations

Xue Zou, Jian Dai, R. A. Francis, Alexias Safi, Karynne Patterson +13 more

Promoter Deletion Leading to Allele Specific Expression in a Genetically Unsolved Case of Primary Ciliary Dyskinesia

UNC Libraries(2025)10.17615/eftt-rm75

N/A

0DataRank · unranked

0 citations

Maimoona A. Zariwala, Kenneth N. Olivier, Amanda Smith, Hong Dang, Weining Yin +20 more

Functional Annotation of the Major Histocompatibility Complex Locus

bioRxiv (Cold Spring Harbor Laboratory)(2026)10.64898/2026.02.01.703124

N/A

0DataRank · unranked

0 citations

Alejandro Barrera, Maria ter Weele, Siyan Liu, Euphy Wu, Shengyu Li +22 more

Cell modeling and rescue of a novel noncoding genetic cause of glycogen storage disease IX

Genetics in Medicine Open(2025)10.1016/j.gimo.2025.103474

N/A

0DataRank · unranked

0 citations

Xue Zou, Jian Dai, R. A. Francis, Alexias Safi, Karynne Patterson +14 more

Causal Genetic Variants in Stillbirth

New England Journal of Medicine(2020)10.1056/nejmoa1908753

N/A

0DataRank · unranked

140 citations

Jessica L. Giordano, Vanessa Thorsten, Christie M. Buchovecky, Amanda Thomas‐Wilson, Mythily Ganapathi +21 more

Effects of a patient-derived de novo coding alteration of CACNA1I in mice connect a schizophrenia risk gene with sleep spindle deficits

Translational Psychiatry(2020)10.1038/s41398-020-0685-1

N/A

0DataRank · unranked

44 citations

David S. Uygun, Lingling Yang, James M. McNally, Violeta G. López-Huerta, Mario A. Arias-García +17 more