David A. Rasko

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

2.5Author DataRank

Indexed papers

11in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 11 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes

eLife(2023)10.7554/elife.85867

Top 13%

1.7DataRank

Top 13%113 citations

Zoe A. Dyson, Danielle J. Ingle, Afreenish Amir, Mabel Kamweli Aworh, Marie Anne Chattaway +95 more

Papers

Driven by 43 papers — median percentile 22. Top paper: “Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes”.

Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes

eLife(2023)10.7554/elife.85867

Top 13%

1.7DataRank

Top 13%113 citations

Zoe A. Dyson, Danielle J. Ingle, Afreenish Amir, Mabel Kamweli Aworh, Marie Anne Chattaway +95 more

Pathogenomic analyses of Shigella isolates inform factors limiting shigellosis prevention and control across LMICs

Nature Microbiology(2022)10.1038/s41564-021-01054-z

N/A

1.4DataRank · unranked

49 citations

Adam J. Simpkin, Caisey V. Pulford, Ross Low, David A. Rasko, Daniel J. Rigden +5 more

Divergent Pseudomonas aeruginosa LpxO enzymes perform site-specific lipid A 2-hydroxylation

mBio(2023)10.1128/mbio.02823-23

N/A

0.586DataRank · unranked

18 citations

Courtney E. Chandler, Charles M. Met, Joseph J. Gillespie, Janette M. Harro, David R. Goodlett +3 more

Typhi Mykrobe: fast and accurate lineage identification and antimicrobial resistance genotyping directly from sequence reads for the typhoid fever agent Salmonella Typhi

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.30.613582

N/A

0.292DataRank · unranked

5 citations

Jane Hawkey, Martin Hunt, Zamin Iqbal, Jacqueline A. Keane, Ayorinde O. Afolayan +33 more

Genome Sequences of Four Shigella boydii Strains Representative of the Major S. boydii Clades

Microbiology Resource Announcements(2020)10.1128/mra.00881-20

Top 59%

0.260DataRank

Top 59%3 citations

Tracy H. Hazen, Gopi Vyas, Jane M. Michalski, David A. Rasko, Michael J. Sikorski

Global diversity and antimicrobial resistance of typhoid fever pathogens: insights from 13,000 Salmonella Typhi genomes

medRxiv(2022)10.1101/2022.12.28.22283969

Top 59%

0.257DataRank

Top 59%4 citations

Zoe A. Dyson, Danielle J. Ingle, Afreenish Amir, Mabel Kamweli Aworh, Marie Anne Chattaway +95 more

Draft Genome Sequence of Pseudomonas aeruginosa Strain PA14-UM

Microbiology Resource Announcements(2020)10.1128/mra.00978-20

Top 71%

0.134DataRank

Top 71%1 citations

Reza Ghodssi, Najib M. El-Sayed, Rena D. Malik, Olga Goloubeva, Tracy H. Hazen +2 more

Characterization of Shigella flexneri serotype 6 strains from geographically diverse low- and middle-income countries

mBio(2024)10.1128/mbio.02210-24

N/A

0.116DataRank · unranked

1 citations

Charlotte E. Chong, Jose M. Lemme‐Dumit, Tracy H. Hazen, Kate S. Baker, Karen L. Kotloff +12 more

Examination of 189 Campylobacter Species Isolates from the Global Enteric Multicenter Study

Microbiology Resource Announcements(2020)10.1128/mra.00646-20

Top 72%

0.111DataRank

Top 72%1 citations

Tracy H. Hazen, Jane M. Michalski, Frédéric Poly, Sharon M. Tennant, David A. Rasko +1 more

Draft genomes of Aeromonas species isolated from humans

Microbiology Resource Announcements(2025)10.1128/mra.00757-25

Top 78%

0.104DataRank

Top 78%1 citations

Bernadette Hritzo, Jennifer Jones, Jasnehta Permala-Booth, Sharon M. Tennant, David A. Rasko +1 more

Comparison of long-read sequencing technologies in interrogating bacteria and fly genomes

G3 Genes Genomes Genetics(2021)10.1093/g3journal/jkab083

N/A

0DataRank · unranked

58 citations

Mark T. Gasser, Benjamin C. Sparklin, Jane M. Michalski, Carl E. Hjelmen, J. Spencer Johnston +7 more

Evaluation of a high-throughput, cost-effective Illumina library preparation kit

Scientific Reports(2021)10.1038/s41598-021-94911-0

N/A

0DataRank · unranked

22 citations

Jane M. Michalski, Shaoji Cheng, Rayanna S. Patkus, Luke J. Tallon, Lisa Sadzewicz +5 more

Risk factors for transmission of carbapenem-resistant Enterobacterales to healthcare personnel gloves and gowns in the USA

Journal of Hospital Infection(2021)10.1016/j.jhin.2020.12.012

N/A

0DataRank · unranked

16 citations

M. Hong Nguyen, David P. Calfee, Loren G. Miller, Lisa Pineles, LS Magder +5 more

Draft Genome Sequences of Two Enteroinvasive Escherichia coli Strains Representative of Major Enteroinvasive E. coli Clades

Microbiology Resource Announcements(2021)10.1128/mra.00319-21

Top 100%

0DataRank

Top 100%0 citations

Tracy H. Hazen, Gopi Vyas, Jane M. Michalski, David A. Rasko, Michael J. Sikorski

Informing shigellosis prevention and control through pathogen genomics

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.09.447709

N/A

0DataRank · unranked

0 citations

Adam J. Simpkin, Caisey V. Pulford, Ross Low, David A. Rasko, Daniel J. Rigden +5 more

Persistence of Rare Salmonella Typhi Genotypes Susceptible to First-Line Antibiotics in the Remote Islands of Samoa

mBio(2022)10.1128/mbio.01920-22

N/A

0DataRank · unranked

17 citations

Tracy H. Hazen, Sachin N. Desai, Susana Nimarota-Brown, Siaosi Tupua, Michelle Sialeipata +17 more

Spatial-temporal and phylogenetic analyses of epidemiologic data to help understand the modes of transmission of endemic typhoid fever in Samoa

PLoS neglected tropical diseases(2022)10.1371/journal.pntd.0010348

N/A

0DataRank · unranked

5 citations

Jianguo Ma, Tracy H. Hazen, Sachin N. Desai, Siaosi Tupua, Susana Nimarota-Brown +11 more

Comparative Genomics Identifies Features Associated with Methicillin-Resistant Staphylococcus aureus (MRSA) Transmission in Hospital Settings

mSphere(2022)10.1128/msphere.00116-22

N/A

0DataRank · unranked

3 citations

Stephanie Hitchcock, Lyndsay M. O’Hara, Jane M. Michalski, J. Kristie Johnson, David P. Calfee +5 more

Molecular concordance of methicillin-resistant Staphylococcus aureus isolates from healthcare workers and patients

Infection Control and Hospital Epidemiology(2022)10.1017/ice.2022.159

N/A

0DataRank · unranked

1 citations

Stephanie Hitchcock, J. Kristie Johnson, O. Colin Stine, Surbhi Leekha, Kerri A. Thom +4 more

Persistence of rare Salmonella Typhi genotypes susceptible to first-line antibiotics in the remote islands of Samoa

medRxiv(2022)10.1101/2022.03.22.22271657

N/A

0DataRank · unranked

2 citations

Tracy H. Hazen, Sachin N. Desai, Susana Nimarota-Brown, Siaosi Tupua, Michelle Sialeipata +17 more

Genomic diversity of non-diarrheagenic fecal Escherichia coli from children in sub-Saharan Africa and south Asia and their relatedness to diarrheagenic E. coli

Nature Communications(2023)10.1038/s41467-023-36337-y

N/A

0DataRank · unranked

25 citations

Jane M. Michalski, Sharon M. Tennant, David A. Rasko, Tracy H. Hazen

Genomic and Functional Characterization of Longitudinal Pseudomonas aeruginosa Isolates from Young Patients with Cystic Fibrosis

Microbiology Spectrum(2023)10.1128/spectrum.01556-23

N/A

0DataRank · unranked

7 citations

Casey E. Hofstaedter, Tracy H. Hazen, David A. Rasko, Robert K. Ernst, Courtney E. Chandler

Genomic, transcriptomic, and phenotypic differences among archetype Shigella flexneri strains of serotypes 2a, 3a, and 6

mSphere(2023)10.1128/msphere.00408-23

N/A

0DataRank · unranked

5 citations

Tracy H. Hazen, BreOnna C. Delaine-Elias, David A. Rasko, Eileen M. Barry, Caitlin E. Gabor

Clinical and Bacterial Characteristics Associated with Glove and Gown Contamination by Carbapenem-Resistant Klebsiella pneumoniae in the Health Care Setting

Microbiology Spectrum(2023)10.1128/spectrum.01775-23

N/A

0DataRank · unranked

3 citations

Timileyin Adediran, Stephanie Hitchcock, Lyndsay M. O’Hara, Lisa Pineles, Jane M. Michalski +7 more

Deciphering transcript architectural complexity in bacteria and archaea

mBio(2024)10.1128/mbio.02359-24

N/A

0DataRank · unranked

1 citations

Robin E. Bromley, Kaylee J. Watson, Ricky S. Adkins, Christopher I. Holt, Jarrett F. Lebov +5 more

Characterization of Pseudomonas aeruginosa from subjects with diffuse panbronchiolitis

Microbiology Spectrum(2024)10.1128/spectrum.00530-24

N/A

0DataRank · unranked

1 citations

Casey E. Hofstaedter, Ian P. O’Keefe, Hyojik Yang, Dina A. Moustafa, Matthew E. Sherman +6 more

Deciphering Bacterial and Archaeal Transcriptional Dark Matter and Its Architectural Complexity

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.02.587803

N/A

0DataRank · unranked

0 citations

Robin E. Bromley, Kaylee J. Watson, Ricky S. Adkins, Christopher I. Holt, Jarrett F. Lebov +5 more

Draft genome sequences of evolutionary distant Yersinia species representatives

Microbiology Resource Announcements(2024)10.1128/mra.00996-24

Top 100%

0DataRank

Top 100%0 citations

Taylor M. Garrison, Robert K. Ernst, David A. Rasko, Matthew B. Lawrenz, Amanda Brady

Typhi Mykrobe: fast and accurate lineage identification and antimicrobial resistance genotyping directly from sequence reads for the typhoid fever agent Salmonella Typhi

Genome Medicine(2025)10.1186/s13073-025-01551-4

N/A

0DataRank · unranked

2 citations

Jane Hawkey, Martin Hunt, Zamin Iqbal, Jacqueline A. Keane, Ayorinde O. Afolayan +33 more

The TyphiNET data visualisation dashboard: unlocking Salmonella Typhi genomics data to support public health

Genome Medicine(2025)10.1186/s13073-025-01470-4

N/A

0DataRank · unranked

4 citations

Louise Cerdeira, Vandana Sharma, Megan E. Carey, Kathryn E. Holt, David M. Aanensen +69 more

Complete genomes of hybrid Escherichia coli isolates containing virulence factors from enterotoxigenic and enteropathogenic pathovars

Microbiology Resource Announcements(2025)10.1128/mra.00959-25

Top 100%

0DataRank

Top 100%0 citations

Jane M. Michalski, Michael J. Sikorski, David A. Rasko, Bernadette Hritzo

Genomes of enteric pathogen isolates from polymicrobial infections in cases of pediatric diarrhea

Microbiology Resource Announcements(2025)10.1128/mra.01015-25

N/A

0DataRank · unranked

0 citations

Jane M. Michalski Wilhelm, David A. Rasko, Bernadette Hritzo

Redefining enteroaggregative Escherichia coli (EAEC): Genomic characterization of epidemiological EAEC strains

PLoS neglected tropical diseases(2020)10.1371/journal.pntd.0008613

N/A

0DataRank · unranked

85 citations

Mark T. Østerlund, Katrine Joensen, Araceli E. Santiago, Inácio Mandomando, Alejandro Cravioto +8 more

Characterization of the role of putative Aeromonas caviae -specific virulence factor, flgB, in virulence and host–pathogen interactions

Journal of Bacteriology(2025)10.1128/jb.00339-25

N/A

0DataRank · unranked

0 citations

Jane M. Michalski, David A. Rasko, Bernadette Hritzo

Comparative Genomics of Atypical Enteropathogenic Escherichia coli from Kittens and Children Identifies Bacterial Factors Associated with Virulence in Kittens

Infection and Immunity(2020)10.1128/iai.00619-20

N/A

0DataRank · unranked

11 citations

Tracy H. Hazen, David A. Rasko, Megan E. Jacob, Johanna R. Elfenbein, Stephen H. Stauffer +2 more

Comparative genomic analysis provides insight into the phylogeny and virulence of atypical enteropathogenic Escherichia coli strains from Brazil

PLoS neglected tropical diseases(2020)10.1371/journal.pntd.0008373

N/A

0DataRank · unranked

26 citations

Tracy H. Hazen, Luís Fernando dos Santos, Taylor K. S. Richter, Jane M. Michalski, David A. Rasko +1 more

Best Practices for Successfully Writing and Publishing a Genome Announcement in Microbiology Resource Announcements

Microbiology Resource Announcements(2020)10.1128/mra.00763-20

N/A

0DataRank · unranked

3 citations

David A. Baltrus, Vincent M. Bruno, John J. Dennehy, Steven R. Gill, Julia A. Maresca +11 more

Examination of Staphylococcus aureus Isolates from the Gloves and Gowns of Intensive Care Unit Health Care Workers

Microbiology Resource Announcements(2020)10.1128/mra.00691-20

N/A

0DataRank · unranked

1 citations

Stephanie Hitchcock, Lyndsay M. O’Hara, Jane M. Michalski, J. Kristie Johnson, David P. Calfee +5 more

Comparison of long read sequencing technologies in resolving bacteria and fly genomes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.21.213975

N/A

0DataRank · unranked

1 citations

Mark T. Gasser, Benjamin C. Sparklin, Jane M. Michalski, Xuechu Zhao, Robin E. Bromley +5 more

Host Adaptation Predisposes Pseudomonas aeruginosa to Type VI Secretion System-Mediated Predation by the Burkholderia cepacia Complex

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.10.036012

N/A

0DataRank · unranked

0 citations

Courtney E. Chandler, David A. Rasko, Robert K. Ernst, Matthew C. Wolfgang, Peggy A. Cotter +1 more

Draft Genome Sequence of Escherichia coli Strain UMD142

Microbiology Resource Announcements(2020)10.1128/mra.01009-20

N/A

0DataRank · unranked

0 citations

Husain Poonawala, Kapil Saharia, Michael S. Donnenberg, David A. Rasko, Tracy H. Hazen

Genome Sequencing of Escherichia coli and Klebsiella pneumoniae Isolates That Harbor the FOX-5 β-Lactamase Gene

Microbiology Resource Announcements(2020)10.1128/mra.01116-20

Top 100%

0DataRank

Top 100%0 citations

J. Kristie Johnson, Anthony D. Harris, David A. Rasko, Tracy H. Hazen

Draft Genome Sequences of Five Diverse Klebsiella Species Isolates from Intensive Care Unit Patients

Microbiology Resource Announcements(2020)10.1128/mra.01131-20

Top 100%

0DataRank

Top 100%0 citations

Stephanie Hitchcock, Lyndsay M. O’Hara, Jane M. Michalski, J. Kristie Johnson, David P. Calfee +4 more

David A. Rasko

Indexed papers

Top data-sharing exemplar

Papers