Lauren Coombe

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological SciencesComputer ScienceEnvironmental Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 16 papers. Top paper: “Tigmint: correcting assembly errors using linked reads from large molecules”.

Tigmint: correcting assembly errors using linked reads from large molecules

BMC Bioinformatics(2018)10.1186/s12859-018-2425-6

N/A

3.3DataRank · unranked

138 citations

Lauren Coombe, Justin Chu, Rene L. Warren, Benjamin P. Vandervalk, Sarah Yeo +6 more

LongStitch: high-quality genome assembly correction and scaffolding using long reads

BMC Bioinformatics(2021)10.1186/s12859-021-04451-7

N/A

0.666DataRank · unranked

84 citations

Janet X. Li, Theodora Lo, Johnathan Wong, Vladimir Nikolić, René L. Warren +2 more

LongStitch: High-quality genome assembly correction and scaffolding using long reads

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.17.448848

N/A

0DataRank · unranked

4 citations

Janet X. Li, Theodora Lo, Johnathan Wong, Vladimir Nikolić, René L. Warren +2 more

btllib: A C++ library with Python interface forefficient genomic sequence processing

The Journal of Open Source Software(2022)10.21105/joss.04720

N/A

0DataRank · unranked

12 citations

Parham Kazemi, Lauren Coombe, Johnathan Wong, Amirhossein Afshinfard, Justin Chu +3 more

ntEdit+Sealer: Efficient Targeted Error Resolution and Automated Finishing of Long‐Read Genome Assemblies

Current Protocols(2022)10.1002/cpz1.442

N/A

0DataRank · unranked

11 citations

Lauren Coombe, Johnathan Wong, Inanc Birol, René L. Warren, Janet X. Li

Physlr: Next-Generation Physical Maps

DNA(2022)10.3390/dna2020009

N/A

0DataRank · unranked

7 citations

Shaun D. Jackman, Johnathan Wong, Lauren Coombe, Justin Chu, Vladimir Nikolić +5 more

RResolver: efficient short-read repeat resolution within ABySS

BMC Bioinformatics(2022)10.1186/s12859-022-04790-z

N/A

0DataRank · unranked

1 citations

Amirhossein Afshinfard, Justin Chu, Johnathan Wong, Lauren Coombe, Ka Ming Nip +3 more

ntJoin: Fast and lightweight assembly-guided scaffolding using minimizer graphs

Bioinformatics(2020)10.1093/bioinformatics/btaa253

N/A

0DataRank · unranked

44 citations

Vladimir Nikolić, Justin Chu, Inanc Birol, René L. Warren, Lauren Coombe

ntLink: A Toolkit for De Novo Genome Assembly Scaffolding and Mapping Using Long Reads

Current Protocols(2023)10.1002/cpz1.733

N/A

0DataRank · unranked

57 citations

René L. Warren, Johnathan Wong, Vladimir Nikolić, Inanc Birol, Lauren Coombe

Linear time complexity de novo long read genome assembly with GoldRush

Nature Communications(2023)10.1038/s41467-023-38716-x

N/A

0DataRank · unranked

39 citations

Lauren Coombe, Vladimir Nikolić, Emily Zhang, Ka Ming Nip, Puneet Sidhu +3 more

aaHash: recursive amino acid sequence hashing

Bioinformatics Advances(2023)10.1093/bioadv/vbad162

N/A

0DataRank · unranked

1 citations

Parham Kazemi, Lauren Coombe, René L. Warren, Inanc Birol, Johnathan Wong

ntLink: a toolkit for de novo genome assembly scaffolding and mapping using long reads

arXiv (Cornell University)(2023)10.48550/arxiv.2301.08785

N/A

0DataRank · unranked

0 citations

René L. Warren, Johnathan Wong, Vladimir Nikolić, Inanc Birol, Lauren Coombe

aaHash: recursive amino acid sequence hashing

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.08.539909

N/A

0DataRank · unranked

0 citations

Parham Kazemi, Lauren Coombe, René L. Warren, Inanc Birol, Johnathan Wong

ntRoot: Computational Inference of Human Ancestry at Scale from Genomic Data

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.26.586646

N/A

0DataRank · unranked

2 citations

Lauren Coombe, Johnathan Wong, Parham Kazemi, Inanc Birol, René L. Warren

GoldRush: A de novo long read genome assembler with linear time complexity

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.25.513734

N/A

0DataRank · unranked

1 citations

Lauren Coombe, Vladimir Nikolić, Emily Zhang, Ka Ming Nip, Puneet Sidhu +3 more

ntJoin: Fast and lightweight assembly-guided scaffolding using minimizer graphs

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.13.905240

N/A

0DataRank · unranked

1 citations

Vladimir Nikolić, Justin Chu, Inanc Birol, René L. Warren, Lauren Coombe