🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

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Juan Carlos Rivera-Mulia

Juan Carlos Rivera-Mulia

University of Minnesota

ORCID: 0000-0002-7566-3875

Also affiliated with University of Minnesota Medical Center

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

10.5Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Expanded encyclopaedias of DNA elements in the human and mouse genomes

Nature(2020)10.1038/s41586-020-2493-4

Top 3%

6.4DataRank

Top 3%2615 citations

Federico Abascal, Reyes Acosta, Nicholas J. Addleman, Jessika Adrian, Veena Afzal +501 more

Papers

Driven by 15 papers — median percentile 96. Top paper: “Expanded encyclopaedias of DNA elements in the human and mouse genomes”.

Expanded encyclopaedias of DNA elements in the human and mouse genomes

Nature(2020)10.1038/s41586-020-2493-4

Top 3%

6.4DataRank

Top 3%2615 citations

Federico Abascal, Reyes Acosta, Nicholas J. Addleman, Jessika Adrian, Veena Afzal +501 more

An integrative ENCODE resource for cancer genomics

Nature Communications(2020)10.1038/s41467-020-14743-w

Top 5%

4.1DataRank

Top 5%190 citations

Donghoon Lee, Vineet K. Dhiman, Peng Jiang, Jie Xu, Patrick D. McGillivray +53 more

NIH SenNet Consortium to map senescent cells throughout the human lifespan to understand physiological health

Nature Aging(2022)10.1038/s43587-022-00326-5

N/A

2.1DataRank · unranked

128 citations

Patty J. Lee, Christopher C. Benz, Philip D. Blood, Katy Börner, Judith Campisi +93 more

Epigenomic signatures associated with spontaneous and replication stress-induced DNA double strand breaks

Frontiers in Genetics(2022)10.3389/fgene.2022.907547

N/A

0DataRank · unranked

4 citations

Silvia Meyer‐Nava, Stephen Landry, Arijita Chakraborty, Juan Carlos Rivera-Mulia, Wenyi Feng +1 more

You shall not pass! Unveiling the barriers for cohesin-mediated loop extrusion

Molecular Cell(2022)10.1016/j.molcel.2022.06.028

N/A

0DataRank · unranked

1 citations

Juan Carlos Rivera-Mulia, Silvia Meyer‐Nava

NIH SenNet Consortium: Mapping Senescent Cells in the Human Body to Understand Health and Disease

Preprints.org(2022)10.20944/preprints202207.0160.v1

N/A

0DataRank · unranked

1 citations

Philip D. Blood, Katy Börner, Judith Campisi, Feng Chen, Heike E. Daldrup‐Link +38 more

NIH SenNet Consortium: Mapping Senescent Cells in the Human Body to Understand Health and Disease

Preprints.org(2022)10.20944/preprints202207.0160.v2

N/A

0DataRank · unranked

0 citations

Philip D. Blood, Katy Börner, Judith Campisi, Feng Chen, Heike E. Daldrup‐Link +38 more

In Silico Stage-Matching of Human, Marmoset, Mouse, and Pig Embryos to Enhance Organ Development Through Interspecies Chimerism

Cell Transplantation(2023)10.1177/09636897231158728

N/A

0DataRank · unranked

9 citations

Seunghyun Lim, Phoebe Strell, Clifford J. Steer, Juan Carlos Rivera-Mulia, Walter C. Low +1 more

Repli‐seq Sample Preparation using Cell Sorting with Cell‐Permeant Dyes

Current Protocols(2023)10.1002/cpz1.945

N/A

0DataRank · unranked

5 citations

Anala V. Shetty, Juan Carlos Rivera-Mulia, Silvia Meyer‐Nava

p63: A Master Regulator at the Crossroads Between Development, Senescence, Aging, and Cancer

Cells(2025)10.3390/cells14010043

N/A

0DataRank · unranked

5 citations

Sam Kunkel, Anala V. Shetty, Addison Bents, Aayush Bhandary, Juan Carlos Rivera-Mulia +1 more

Transcription can be sufficient, but is not necessary, to advance replication timing

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.04.636516

N/A

0DataRank · unranked

4 citations

Takayo Sasaki, Juan Carlos Rivera-Mulia, Jesse L. Turner, Amber N. Brown, Karen E. Alexander +4 more

The long-standing relationship between replication timing, gene expression, and chromatin accessibility is maintained in early mouse embryogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.11.10.687227

N/A

0DataRank · unranked

1 citations

Juan Carlos Rivera-Mulia

PARTAGE: Parallel analysis of replication timing and gene expression

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.02.673838

N/A

0DataRank · unranked

0 citations

Quinn Dickinson, Silvia Meyer‐Nava, Juan Carlos Rivera-Mulia, Lakshana Sruthi Sadu Murari

3D genome organization contributes to genome instability at fragile sites

Nature Communications(2020)10.1038/s41467-020-17448-2

N/A

0DataRank · unranked

76 citations

Takayo Sasaki, Michal Irony Tur-Sinai, Karin Miron, Juan Carlos Rivera-Mulia, Brian Magnuson +4 more

Optimized Repli-seq: improved DNA replication timing analysis by next-generation sequencing

Chromosome Research(2022)10.1007/s10577-022-09703-7

N/A

0DataRank · unranked

7 citations

Claudia Trevilla‐García, Santiago Martinez-Cifuentes, Juan Carlos Rivera-Mulia