Christopher S. Smillie

Also affiliated with Massachusetts General Hospital, Center for Systems Biology

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

14.0Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A framework for human microbiome research

Nature(2012)10.1038/nature11209

Top 2%

8.4DataRank

Top 2%2766 citations

Barbara A. Methé, William Nelson, Mihai Pop, Heather H. Creasy, Michelle Giglio +236 more

Papers

Driven by 26 papers — median percentile 97. Top paper: “A framework for human microbiome research”.

A framework for human microbiome research

Nature(2012)10.1038/nature11209

Top 2%

8.4DataRank

Top 2%2766 citations

Barbara A. Methé, William Nelson, Mihai Pop, Heather H. Creasy, Michelle Giglio +236 more

Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics

Nature Medicine(2021)10.1038/s41591-020-01227-z

N/A

8.2DataRank · unranked

378 citations

Malte D. Luecken, Gökcen Eraslan, Lisa Sikkema, Avinash Waghray, Graham Heimberg +95 more

Longitudinal proteomic analysis of severe COVID-19 reveals survival-associated signatures, tissue-specific cell death, and cell-cell interactions

Cell Reports Medicine(2021)10.1016/j.xcrm.2021.100287

N/A

7.8DataRank · unranked

311 citations

Arnav Mehta, Alexis M. Schneider, Kyle R. Kays, Jamey Guess, Matteo Gentili +38 more

A single-cell and single-nucleus RNA-Seq toolbox for fresh and frozen human tumors

Nature Medicine(2020)10.1038/s41591-020-0844-1

Top 4%

5.6DataRank

Top 4%819 citations

Caroline B. M. Porter, Orr Ashenberg, Julia Waldman, Eugene Drokhlyansky, Isaac Wakiro +45 more

γδ T cells regulate the intestinal response to nutrient sensing

Science(2021)10.1126/science.aba8310

N/A

4.3DataRank · unranked

157 citations

William Khoury-Hanold, Jaechul Lim, Indresh Singh, Moshe Biton, Bernardo S. Reis +14 more

Leveraging polygenic enrichments of gene features to predict genes underlying complex traits and diseases

medRxiv(2020)10.1101/2020.09.08.20190561

N/A

3.4DataRank · unranked

132 citations

Jacob C. Ulirsch, Nathan Y. Cheng, Brian L. Trippe, Rebecca S. Fine, Jenkai Miao +24 more

A single-cell and single-nucleus RNA-seq toolbox for fresh and frozen human tumors

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/761429

N/A

2.5DataRank · unranked

68 citations

Orr Ashenberg, Julia Waldman, Eugene Drokhlyansky, Isaac Wakiro, Indresh Singh +44 more

Plasma proteomics reveals tissue-specific cell death and mediators of cell-cell interactions in severe COVID-19 patients

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.02.365536

N/A

2.2DataRank · unranked

49 citations

Arnav Mehta, Alexis M. Schneider, Kyle R. Kays, Jamey Guess, Matteo Gentili +38 more

An Integrated Taxonomy for Monogenic Inflammatory Bowel Disease

Gastroenterology(2022)10.1053/j.gastro.2021.11.014

N/A

2.0DataRank · unranked

95 citations

Christopher S. Smillie, Sumeet Pandey, Rasa Elmentaite, Gabrielle Wei, Carmen Argmann +35 more

Structure, function and diversity of the healthy human microbiome

Nature(2012)10.1038/nature11234

N/A

1.4DataRank · unranked

10088 citations

Curtis Huttenhower, Dirk Gevers, Rob Knight, Sahar Abubucker, Jonathan H. Badger +235 more

A single-cell survey of the small intestinal epithelium

Nature(2017)10.1038/nature24489

N/A

1.1DataRank · unranked

1850 citations

Moshe Biton, Noga Rogel, Rebecca H. Herbst, Karthik Shekhar, Indresh Singh +18 more

Rewiring of the cellular and inter-cellular landscape of the human colon during ulcerative colitis

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/455451

N/A

1.1DataRank · unranked

19 citations

Moshe Biton, Keri M. Sullivan, Grace Burgin, Daniel B. Graham, Rebecca H. Herbst +24 more

Intra- and Inter-cellular Rewiring of the Human Colon during Ulcerative Colitis

Cell(2019)10.1016/j.cell.2019.06.029

N/A

1.1DataRank · unranked

1412 citations

Moshe Biton, Keri M. Sullivan, Grace Burgin, Daniel B. Graham, Rebecca H. Herbst +28 more

GWAS of stool frequency provides insights into gastrointestinal motility and irritable bowel syndrome

Cell Genomics(2021)10.1016/j.xgen.2021.100069

N/A

1.1DataRank · unranked

39 citations

Xingrong Liu, Indresh Singh, Anita Pandit, Alexander Kurilshikov, Rodrigo Bacigalupe +29 more

Spatially organized multicellular immune hubs in human colorectal cancer

Cell(2021)10.1016/j.cell.2021.08.003

N/A

1.0DataRank · unranked

787 citations

Matan Hofree, Siranush Sarkizova, Joshua D. Pirl, Vjola Jorgji, Alborz Bejnood +73 more

The Human and Mouse Enteric Nervous System at Single-Cell Resolution

Cell(2020)10.1016/j.cell.2020.08.003

N/A

0.948DataRank · unranked

556 citations

Christopher S. Smillie, Nicholas Van Wittenberghe, Maria Ericsson, Gabriel K. Griffin, David S. Fischer +14 more

The enteric nervous system of the human and mouse colon at a single-cell resolution

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/746743

N/A

0.905DataRank · unranked

24 citations

Christopher S. Smillie, Nicholas Van Wittenberghe, Maria Ericsson, Gabriel K. Griffin, Danielle Dionne +11 more

Leveraging polygenic enrichments of gene features to predict genes underlying complex traits and diseases

Nature Genetics(2023)10.1038/s41588-023-01443-6

N/A

0.853DataRank · unranked

293 citations

Jacob C. Ulirsch, Nathan Y. Cheng, Brian L. Trippe, Rebecca S. Fine, Jenkai Miao +23 more

Single-cell and spatial transcriptomics of stricturing Crohn’s disease highlights a fibrosis-associated network

Nature Genetics(2025)10.1038/s41588-025-02225-y

N/A

0.647DataRank · unranked

34 citations

Sathish Subramanian, Åsa Segerstolpe, Vy Anh Tran, Angela Shih, Grace T. Carter +19 more

T helper cells modulate intestinal stem cell renewal and differentiation

bioRxiv (Cold Spring Harbor Laboratory)(2017)10.1101/217133

N/A

0.368DataRank · unranked

5 citations

Adam L. Haber, Semir Beyaz, Noga Rogel, Indresh Singh, Karthik Shekhar +26 more

Multicellular immune hubs and their organization in MMRd and MMRp colorectal cancer

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.30.426796

N/A

0.297DataRank · unranked

4 citations

Matan Hofree, Jonathan Chen, Siranush Sarkizova, Joshua D. Pirl, Vjola Jorgji +71 more

GWAS of stool frequency reveals genes, pathways, and cell types relevant to human gastrointestinal motility and irritable bowel syndrome

medRxiv(2020)10.1101/2020.06.17.20132555

N/A

0.269DataRank · unranked

3 citations

Xingrong Liu, Indresh Singh, Anita Pandit, Alexander Kurilshikov, Rodrigo Bacigalupe +27 more

Bacterial droplet-based single-cell RNA-seq reveals heterogeneity in bacterial populations and in response to antibiotic perturbation

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.01.502326

N/A

0.241DataRank · unranked

4 citations

Haley M. Amemiya, Lorrie L. He, Shivam J. Gandhi, Robert Nicol, Roby P. Bhattacharyya +3 more

Bacterial droplet-based single-cell RNA-seq reveals antibiotic-associated heterogeneous cellular states

Cell(2023)10.1016/j.cell.2023.01.002

N/A

0DataRank · unranked

289 citations

Haley M. Amemiya, Lorrie L. He, Shivam J. Gandhi, Robert Nicol, Roby P. Bhattacharyya +3 more

Discovery of disease-adapted bacterial lineages in inflammatory bowel diseases

Cell Host & Microbe(2024)10.1016/j.chom.2024.05.022

N/A

0DataRank · unranked

44 citations

Thomas N.H. Cheng, Ashwin N. Ananthakrishnan, Bharati Kochar, Kristin E. Burke, Kevin Shannon +4 more

Genome and sequence determinants governing the expression of horizontally acquired DNA in bacteria

The ISME Journal(2020)10.1038/s41396-020-0696-1

N/A

0DataRank · unranked

25 citations

Nathan I Johns, Anthony Yang, Florencia Velez‐Cortes, Christopher S. Smillie, Mark Smith +3 more

Christopher S. Smillie

Indexed papers

Top data-sharing exemplar

Papers