🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Paul Salama

University of Indianapolis

ORCID: 0000-0002-7643-3879

Also affiliated with Indiana University School of Medicine, Indiana University – Purdue University Indianapolis, Indiana University

Biochemistry, Genetics and Molecular BiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

0in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 18 papers. Top paper: “Identification of functionally connected multi-omic biomarkers for Alzheimer’s disease using modularity-constrained Lasso”.

Identification of functionally connected multi-omic biomarkers for Alzheimer’s disease using modularity-constrained Lasso

PLoS ONE(2020)10.1371/journal.pone.0234748
N/A
0DataRank · unranked
10 citations

Pradeep Varathan, Kwangsik Nho, Andrew J. Saykin, Paul Salama, Jingwen Yan +1 more

Differential co-expression analysis reveals early stage transcriptomic decoupling in alzheimer’s disease

BMC Medical Genomics(2020)10.1186/s12920-020-0689-y
N/A
0DataRank · unranked
7 citations

Linhui Xie, Paul Salama, Sha Cao, Kwangsik Nho, Andrew J. Saykin +3 more

Sphere estimation network: three-dimensional nuclei detection of fluorescence microscopy images

Journal of Medical Imaging(2020)10.1117/1.jmi.7.4.044003
N/A
0DataRank · unranked
6 citations

Daniel Mas Montserrat, Chichen Fu, Paul Salama, Kenneth W. Dunn, Edward J. Delp +1 more

Integrative-omics for discovery of network-level disease biomarkers: a case study in Alzheimer’s disease

Briefings in Bioinformatics(2021)10.1093/bib/bbab121
N/A
0DataRank · unranked
16 citations

Bing He, Pradeep Varathan, Kwangsik Nho, Shannon L. Risacher, Andrew J. Saykin +3 more

Three Dimensional Synthetic Non-Ellipsoidal Nuclei Volume Generation Using Bézier Curves

(2021)10.1109/isbi48211.2021.9434149
N/A
0DataRank · unranked
18 citations

Liming Wu, Shuo Han, Paul Salama, Kenneth W. Dunn, Edward J. Delp +1 more

An Ensemble Learning and Slice Fusion Strategy for Three-Dimensional Nuclei Instance Segmentation

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.28.489938
N/A
0DataRank · unranked
10 citations

Alain Chen, Paul Salama, Kenneth W. Dunn, Edward J. Delp, Liming Wu

NISNet3D: Three-Dimensional Nuclear Synthesis and Instance Segmentation for Fluorescence Microscopy Images

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.10.495713
N/A
0DataRank · unranked
7 citations

Alain Chen, Paul Salama, Kenneth W. Dunn, Edward J. Delp, Liming Wu

DINAVID: A Distributed and Networked Image Analysis System for Volumetric Image Data

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.11.491511
N/A
0DataRank · unranked
1 citations

Alain Chen, Soonam Lee, Chichen Fu, Changye Yang, Liming Wu +6 more

Deep trans-omic network fusion reveals altered synaptic network in Alzheimer’s Disease

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.02.490336
N/A
0DataRank · unranked
0 citations

Yash Raj, Pradeep Varathan, Bing He, Kwangsik Nho, Shannon L. Risacher +4 more

NISNet3D: three-dimensional nuclear synthesis and instance segmentation for fluorescence microscopy images

Scientific Reports(2023)10.1038/s41598-023-36243-9
N/A
0DataRank · unranked
28 citations

Alain Chen, Paul Salama, Seth Winfree, Kenneth W. Dunn, Edward J. Delp +1 more

Generalized Matrix Local Low Rank Representation by Random Projection and Submatrix Propagation

PubMed(2023)10.1145/3580305.3599361
N/A
0DataRank · unranked
3 citations

Haiqi Zhu, Tingbo Guo, Changlin Wan, Tong Zhao, Paul Salama +4 more

Deep Trans-Omic Network Fusion for Molecular Mechanism of Alzheimer’s Disease

Journal of Alzheimer s Disease(2024)10.3233/jad-240098
N/A
0DataRank · unranked
2 citations

Yash Raj, Pradeep Varathan, Bing He, Meichen Yu, Kwangsik Nho +4 more

A Quantitative Metric of Confidence For Segmentation of Nuclei in Large Spatially Variable Image Volumes

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.15.589629
N/A
0DataRank · unranked
0 citations

Alain Chen, Paul Salama, Kenneth W. Dunn, Seth Winfree, Edward J. Delp +1 more

A Quantitative Metric of Confidence for Segmentation of Nuclei in Large Spatially Variable Image Volumes

(2024)10.1109/mmsp61759.2024.10743616
N/A
0DataRank · unranked
0 citations

Alain Chen, Paul Salama, Kenneth W. Dunn, Seth Winfree, Edward J. Delp +1 more

Neurometabolic and vascular dysfunction as an early diagnostic for Alzheimer's disease and related dementias

Alzheimer s & Dementia(2025)10.1002/alz.70790
N/A
0DataRank · unranked
6 citations

Scott A. Persohn, Ravi S. Pandey, G. W. Carter, Olivia R. Simcox, Paul Salama +3 more

Distributed and networked analysis of volumetric image data for remote collaboration of microscopy image analysis

Journal of Medical Imaging(2025)10.1117/1.jmi.12.2.024001
N/A
0DataRank · unranked
1 citations

Shuo Han, Soonam Lee, Chichen Fu, Changye Yang, Liming Wu +5 more

Deep fusion of incomplete multi-omic data for molecular mechanism of Alzheimer’s disease

Scientific Reports(2025)10.1038/s41598-025-14636-2
N/A
0DataRank · unranked
1 citations

Yash Raj, Mingzhao Tong, Kwangsik Nho, Paul Salama, Andrew J. Saykin +3 more

Neuro-Metabolic and Vascular Dysfunction as an Early Diagnostic for Alzheimer’s Disease and Related Dementias

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.12.653558
N/A
0DataRank · unranked
2 citations

Scott A. Persohn, Ravi S. Pandey, Olivia R. Simcox, Paul Salama, Paul R. Territo +2 more