Jonas C. Schupp

Also affiliated with Medizinische Hochschule Hannover, German Center for Lung Research

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile

1.1Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Integrated Single Cell Atlas of Endothelial Cells of the Human Lung

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.21.347914

Top 19%

1.1DataRank

Top 19%32 citations

Taylor Adams, Carlos Cosme, Micha Sam Brickman Raredon, Norihito Omote, Sergio Poli +22 more

Papers

Driven by 48 papers — median percentile 81. Top paper: “Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics”.

Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics

Nature Medicine(2021)10.1038/s41591-020-01227-z

N/A

8.2DataRank · unranked

378 citations

Malte D. Luecken, Gökcen Eraslan, Lisa Sikkema, Avinash Waghray, Graham Heimberg +95 more

Chronic lung diseases are associated with gene expression programs favoring SARS-CoV-2 entry and severity

Nature Communications(2021)10.1038/s41467-021-24467-0

N/A

2.0DataRank · unranked

43 citations

Nichelle I. Winters, Mei-i Chung, Chitra Joseph, Austin J. Gutierrez, Arun C. Habermann +67 more

Lung Microenvironments and Disease Progression in Fibrotic Hypersensitivity Pneumonitis

American Journal of Respiratory and Critical Care Medicine(2021)10.1164/rccm.202103-0569oc

N/A

1.5DataRank · unranked

37 citations

John E. McDonough, Jonas C. Schupp, Xiting Yan, Arno Vanstapel, Anke Van Herck +21 more

Transcriptomics of bronchoalveolar lavage cells identifies new molecular endotypes of sarcoidosis

European Respiratory Journal(2021)10.1183/13993003.02950-2020

N/A

1.2DataRank · unranked

58 citations

Xiting Yan, Kevin F. Gibson, Mridu Gulati, Jonas C. Schupp, Giuseppe DeIuliis +24 more

Single-cell RNA-seq reveals ectopic and aberrant lung-resident cell populations in idiopathic pulmonary fibrosis

Science Advances(2020)10.1126/sciadv.aba1983

N/A

1.1DataRank · unranked

1356 citations

Jonas C. Schupp, Sergio Poli, Ehab Ayaub, Nir Neumark, Farida Ahangari +13 more

Integrated Single Cell Atlas of Endothelial Cells of the Human Lung

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.21.347914

Top 19%

1.1DataRank

Top 19%32 citations

Taylor Adams, Carlos Cosme, Micha Sam Brickman Raredon, Norihito Omote, Sergio Poli +22 more

Mechanisms of Hypoxia-Induced Pulmonary Arterial Stiffening in Mice Revealed by a Functional Genetics Assay of Structural, Functional, and Transcriptomic Data

Frontiers in Physiology(2021)10.3389/fphys.2021.726253

N/A

0.556DataRank · unranked

16 citations

Abhay B. Ramachandra, Jonas C. Schupp, Cristina Cavinato, Micha Sam Brickman Raredon, Thomas Bärnthaler +6 more

Single-cell transcriptomic analysis of human pleura reveals stromal heterogeneity and informsin vitromodels of mesothelioma

European Respiratory Journal(2024)10.1183/13993003.00143-2023

N/A

0.466DataRank · unranked

12 citations

José Antonio Valer, Reshma Nibhani, Taylor Adams, Jonas C. Schupp, Niki Veale +14 more

Chronic lung diseases are associated with gene expression programs favoring SARS-CoV-2 entry and severity

Research Square(2020)10.21203/rs.3.rs-119865/v1

N/A

0DataRank · unranked

4 citations

Nichelle I. Winters, Mei-i Chung, Chitra Joseph, Austin J. Gutierrez, Arun C. Habermann +16 more

Single-cell characterization of a model of poly I:C-stimulated peripheral blood mononuclear cells in severe asthma

Respiratory Research(2021)10.1186/s12931-021-01709-9

N/A

0DataRank · unranked

19 citations

Maria P. Diaz-Soto, Miguel F. Sanmamed, Taylor Adams, Jonas C. Schupp, Amolika Gupta +9 more

A Pulmonary Vascular Model From Endothelialized Whole Organ Scaffolds

Frontiers in Bioengineering and Biotechnology(2021)10.3389/fbioe.2021.760309

N/A

0DataRank · unranked

14 citations

Katherine L. Leiby, Allison M. Greaney, Micha Sam Brickman Raredon, Hong Qian, Jonas C. Schupp +10 more

Long noncoding RNA TINCR is a novel regulator of human bronchial epithelial cell differentiation state

Physiological Reports(2021)10.14814/phy2.14727

N/A

0DataRank · unranked

10 citations

Koji Sakamoto, Qin Li, Jonas C. Schupp, Taylor Adams, Farida Ahangari +6 more

Connectome : computation and visualization of cell-cell signaling topologies in single-cell systems data

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.21.427529

N/A

0DataRank · unranked

26 citations

Junchen Yang, James Garritano, Meng Wang, Dan Kushnir, Jonas C. Schupp +8 more

Type I Interferon Transcriptional Network Regulates Expression of Coinhibitory Receptors in Human T cells

Research Square(2021)10.21203/rs.3.rs-133494/v1

N/A

0DataRank · unranked

8 citations

Tomokazu S. Sumida, Shai Dulberg, Jonas C. Schupp, Helen A. Stillwell, Pierre‐Paul Axisa +7 more

CINS: Cell Interaction Network inference from Single cell expression data

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.22.432206

N/A

0DataRank · unranked

4 citations

Carlos Cosme, Taylor Adams, Jonas C. Schupp, Koji Sakamoto, Nikos Xylourgidis +4 more

Cell-Specific Transcriptome of the COPD Alveolar Niche

Research Square(2021)10.21203/rs.3.rs-276195/v1

N/A

0DataRank · unranked

0 citations

John E. McDonough, Taylor Adams, Neeharika Kotahpalli, Jonas C. Schupp, Thomas Bärnthaler +19 more

Characterization of the COPD alveolar niche using single-cell RNA sequencing

Nature Communications(2022)10.1038/s41467-022-28062-9

N/A

0DataRank · unranked

227 citations

John E. McDonough, Taylor Adams, Neeharika Kothapalli, Thomas Bärnthaler, Rhiannon B. Werder +21 more

Single-cell multi-omics reveals dyssynchrony of the innate and adaptive immune system in progressive COVID-19

Nature Communications(2022)10.1038/s41467-021-27716-4

N/A

0DataRank · unranked

188 citations

Tomokazu S. Sumida, Nima Nouri, Xiting Yan, Amy Zhao, Victor Gasque +47 more

Type I interferon transcriptional network regulates expression of coinhibitory receptors in human T cells

Nature Immunology(2022)10.1038/s41590-022-01152-y

N/A

0DataRank · unranked

160 citations

Shai Dulberg, Jonas C. Schupp, Matthew R. Lincoln, Helen A. Stillwell, Pierre‐Paul Axisa +7 more

Airway basal cells show a dedifferentiated KRT17highPhenotype and promote fibrosis in idiopathic pulmonary fibrosis

Nature Communications(2022)10.1038/s41467-022-33193-0

N/A

0DataRank · unranked

146 citations

Jonas C. Schupp, Linda Plappert, Oliver Terwolbeck, Nataliia Artysh, Gian Kayser +14 more

Computation and visualization of cell–cell signaling topologies in single-cell systems data using Connectome

Scientific Reports(2022)10.1038/s41598-022-07959-x

N/A

0DataRank · unranked

140 citations

Junchen Yang, James Garritano, Meng Wang, Dan Kushnir, Jonas C. Schupp +8 more

Saracatinib, a Selective Src Kinase Inhibitor, Blocks Fibrotic Responses in Preclinical Models of Pulmonary Fibrosis

American Journal of Respiratory and Critical Care Medicine(2022)10.1164/rccm.202010-3832oc

N/A

0DataRank · unranked

118 citations

Christine Becker, Daniel G. Foster, Maurizio Chioccioli, Meghan Nelson, K.M. Beke +29 more

Recruited monocytes/macrophages drive pulmonary neutrophilic inflammation and irreversible lung tissue remodeling in cystic fibrosis

Cell Reports(2022)10.1016/j.celrep.2022.111797

N/A

0DataRank · unranked

68 citations

Ee-Chun Cheng, Caterina Di Pietro, Toma Tebaldi, Giulia Biancon, Caroline J. Zeiss +11 more

BAL Transcriptomes Characterize Idiopathic Pulmonary Fibrosis Endotypes With Prognostic Impact

CHEST Journal(2022)10.1016/j.chest.2021.12.668

N/A

0DataRank · unranked

23 citations

Stijn E. Verleden, Jonas C. Schupp, John E. McDonough, Tinne Goos, Jonas Yserbyt +6 more

FK506-Binding Protein 11 Is a Novel Plasma Cell-Specific Antibody Folding Catalyst with Increased Expression in Idiopathic Pulmonary Fibrosis

Cells(2022)10.3390/cells11081341

N/A

0DataRank · unranked

21 citations

Yoshihiro Ishikawa, Elisabeth Hennen, Stephan Winklmeier, Jonas C. Schupp, Larissa Knüppel +19 more

CINS: Cell Interaction Network inference from Single cell expression data

PLoS Computational Biology(2022)10.1371/journal.pcbi.1010468

N/A

0DataRank · unranked

10 citations

Carlos Cosme, Taylor Adams, Jonas C. Schupp, Koji Sakamoto, Nikos Xylourgidis +5 more

Saracatinib, a Selective Src Kinase Inhibitor, Blocks Fibrotic Responses in In Vitro, In Vivo and Ex Vivo Models of Pulmonary Fibrosis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.04.474955

N/A

0DataRank · unranked

1 citations

Christine Becker, Daniel G. Foster, Maurizio Chioccioli, Meghan Nelson, K.M. Beke +24 more

iDESC: Identifying differential expression in single-cell RNA sequencing data with multiple subjects

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.07.479293

N/A

0DataRank · unranked

1 citations

Ningya Wang, Taylor Adams, Jonas C. Schupp, Weimiao Wu, John E. McDonough +5 more

microRNA-33 deficiency in macrophages enhances autophagy, improves mitochondrial homeostasis, and protects against lung fibrosis

JCI Insight(2023)10.1172/jci.insight.158100

N/A

0DataRank · unranked

62 citations

Nathan L. Price, Shipra Malik, Maurizio Chioccioli, Thomas Bärnthaler, Taylor Adams +22 more

Increased expression of CXCL6 in secretory cells drives fibroblast collagen synthesis and is associated with increased mortality in idiopathic pulmonary fibrosis

European Respiratory Journal(2023)10.1183/13993003.00088-2023

N/A

0DataRank · unranked

21 citations

Jiangning Tan, Rosa Marie Apel, Benjamin Seeliger, Jonas C. Schupp, Xiaoyun Li +24 more

Alveolar Vascular Remodeling in Nonspecific Interstitial Pneumonia: Replacement of Normal Lung Capillaries with COL15A1 -Positive Endothelial Cells

American Journal of Respiratory and Critical Care Medicine(2023)10.1164/rccm.202303-0544le

N/A

0DataRank · unranked

13 citations

Edward P. Manning, Maurizio Chioccioli, Jan C. Kamp, Leonard Christian, Changwan Ryu +7 more

iDESC: identifying differential expression in single-cell RNA sequencing data with multiple subjects

BMC Bioinformatics(2023)10.1186/s12859-023-05432-8

N/A

0DataRank · unranked

13 citations

Jiayi Zhao, Taylor Adams, Ningya Wang, Jonas C. Schupp, Weimiao Wu +6 more

Single-cell profiling reveals immune aberrations in progressive idiopathic pulmonary fibrosis

medRxiv(2023)10.1101/2023.04.29.23289296

N/A

0DataRank · unranked

12 citations

Amy Zhao, Nir Neumark, Jonas C. Schupp, Farida Ahangari, Carlos Cosme +12 more

Single-Cell Profiling Reveals Immune Aberrations in Progressive Idiopathic Pulmonary Fibrosis

American Journal of Respiratory and Critical Care Medicine(2024)10.1164/rccm.202306-0979oc

N/A

0DataRank · unranked

79 citations

Amy Zhao, Nir Neumark, Jonas C. Schupp, Farida Ahangari, Carlos Cosme +12 more

Single-Cell Analysis Reveals Novel Immune Perturbations in Fibrotic Hypersensitivity Pneumonitis

American Journal of Respiratory and Critical Care Medicine(2024)10.1164/rccm.202401-0078oc

N/A

0DataRank · unranked

42 citations

Avraham Unterman, Nebal Abu Hussein, Prapti Sharma, Fadi Nikola, Jasper Flint +20 more

Studying the Pulmonary Endothelium in Health and Disease: An Official American Thoracic Society Workshop Report

American Journal of Respiratory Cell and Molecular Biology(2024)10.1165/rcmb.2024-0330st

N/A

0DataRank · unranked

11 citations

Cristina M. Alvira, Julie A. Bastarache, Serpil C. Erzurum, Wolfgang M. Kuebler, Eric P. Schmidt +29 more

Predicting lung aging using scRNA-Seq data

PLoS Computational Biology(2024)10.1371/journal.pcbi.1012632

N/A

0DataRank · unranked

2 citations

A Singh, John E. McDonough, Taylor Adams, Robin Vos, Ruben De Man +10 more

Comparison of organ involvement clusters in Black and White American sarcoidosis patients from a prospectively collected patient registry

Respiratory Medicine(2024)10.1016/j.rmed.2024.107605

N/A

0DataRank · unranked

1 citations

Anoosha Tauquir, Shuaiqi Huang, Xiaofeng Wang, Jonas C. Schupp, Robert P. Baughman +2 more

A deep generative model for deciphering cellular dynamics and in silico drug discovery in complex diseases

Nature Biomedical Engineering(2025)10.1038/s41551-025-01423-7

N/A

0DataRank · unranked

19 citations

Jonas C. Schupp, Taylor Adams, Gérémy Clair, A. Justet, Farida Ahangari +17 more

Single-cell RNA Sequencing Analysis of Sputum Cell Transcriptomes Reveals Pathways and Communication Networks That Contribute to the Pathogenesis of Asthma

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.03.31.646405

N/A

0DataRank · unranked

3 citations

Qing Liu, Taylor Adams, Jonas C. Schupp, Sihan Li, Stark Huang +9 more

Predicting lung aging using scRNA-Seq data

UNC Libraries(2025)10.17615/ka9b-3z04

N/A

0DataRank · unranked

0 citations

Vanaudenaerde B.M, Ceulemans L.J, Naftali Kaminski, Jonas C. Schupp, Vos R +10 more

Platform Effects on Regeneration by Pulmonary Basal Cells as Evaluated by Single-Cell RNA Sequencing

Cell Reports(2020)10.1016/j.celrep.2020.03.004

N/A

0DataRank · unranked

54 citations

Taylor Adams, Micha Sam Brickman Raredon, Elise Gubbins, Jonas C. Schupp, Alexander J. Engler +5 more

Gene coexpression networks reveal novel molecular endotypes in alpha-1 antitrypsin deficiency

Thorax(2020)10.1136/thoraxjnl-2019-214301

N/A

0DataRank · unranked

9 citations

Wenlan Zang, Milica Vukmirovic, Xiting Yan, Taylor Adams, Giuseppe DeIuliis +20 more

Type I Interferon Transcriptional Network Regulates Expression of Coinhibitory Receptors in Human T cells

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.30.362947

N/A

0DataRank · unranked

15 citations

Shai Dulberg, Jonas C. Schupp, Helen A. Stillwell, Pierre‐Paul Axisa, Michela Comi +7 more

Chronic lung diseases are associated with gene expression programs favoring SARS-CoV-2 entry and severity

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.20.347187

N/A

0DataRank · unranked

9 citations

Nichelle I. Winters, Mei-i Chung, Chitra Joseph, Austin J. Gutierrez, Arun C. Habermann +17 more

Airway Basal Cells show a dedifferentiated KRT17 high Phenotype and promote Fibrosis in Idiopathic Pulmonary Fibrosis

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.04.283408

N/A

0DataRank · unranked

7 citations

Jonas C. Schupp, Linda Plappert, Oliver Terwolbeck, Gian Kayser, Peggy Engelhard +13 more

Single Cell Transcriptional Archetypes of Airway Inflammation in Cystic Fibrosis

medRxiv(2020)10.1101/2020.03.06.20032292

N/A

0DataRank · unranked

6 citations

Sara Khanal, José L. Gómez, Maor Sauler, Taylor Adams, Geoffrey Chupp +10 more

Transcriptomics of Bronchoalveolar Lavage Cells Identifies New Molecular Endotypes of Sarcoidosis

medRxiv(2020)10.1101/2020.07.24.20161448

N/A

0DataRank · unranked

5 citations

Xiting Yan, Kevin F. Gibson, Mridu Gulati, Jonas C. Schupp, Giuseppe DeIuliis +24 more

Jonas C. Schupp

Indexed papers

Top data-sharing exemplar

Papers