Yixin Zhao

Also affiliated with Huazhong Agricultural University, Cold Spring Harbor Laboratory, First Affiliated Hospital of Xi'an Jiaotong University, First Hospital of Jilin University, Sanya University, Ministry of Education

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 14 papers. Top paper: “New MicroRNAs in Drosophila—Birth, Death and Cycles of Adaptive Evolution”.

New MicroRNAs in Drosophila—Birth, Death and Cycles of Adaptive Evolution

PLoS Genetics(2014)10.1371/journal.pgen.1004096

N/A

0.606DataRank · unranked

56 citations

Yang Shen, Alexandra P. Lewis, Yuxin Chen, Li Guo, Yixin Zhao +7 more

RNA Pol II pausing facilitates phased pluripotency transitions by buffering transcription

Genes & Development(2022)10.1101/gad.349565.122

N/A

0.489DataRank · unranked

25 citations

Alexandra G. Chivu, Yixin Zhao, Edward J. Rice, Adam Siepel, Charles G. Danko +2 more

Characterization of Gene Expression Signatures for the Identification of Cellular Heterogeneity in the Developing Mammary Gland

Journal of Mammary Gland Biology and Neoplasia(2021)10.1007/s10911-021-09486-3

N/A

0DataRank · unranked

25 citations

Marygrace C. Trousdell, Samantha L. Cyrill, Yixin Zhao, Mary J. Feigman, Julia M. Bouhuis +4 more

Deconvolution of expression for nascent RNA-sequencing data (DENR) highlights pre-RNA isoform diversity in human cells

Bioinformatics(2021)10.1093/bioinformatics/btab582

N/A

0DataRank · unranked

9 citations

Noah Dukler, Gilad Barshad, Shushan Toneyan, Charles G. Danko, Adam Siepel +1 more

Deconvolution of Expression for Nascent RNA Sequencing Data (DENR) Highlights Pre-RNA Isoform Diversity in Human Cells

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.16.435537

N/A

0DataRank · unranked

4 citations

Noah Dukler, Gilad Barshad, Shushan Toneyan, Charles G. Danko, Adam Siepel +1 more

NDI: A Platform-Independent Data Interface and Database for Neuroscience Physiology and Imaging Experiments

eNeuro(2022)10.1523/eneuro.0073-21.2022

N/A

0DataRank · unranked

5 citations

Yixin Zhao, Ora S. Rogovin, Kelly Zhang, Andrew W. Hu, Mo Re Kim +10 more

RNA Pol II pausing facilitates phased pluripotency transitions by buffering transcription

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.21.489065

N/A

0DataRank · unranked

5 citations

Alexandra G. Chivu, Yixin Zhao, Edward J. Rice, Adam Siepel, Charles G. Danko +2 more

Model-based characterization of the equilibrium dynamics of transcription initiation and promoter-proximal pausing in human cells

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.19.512929

N/A

0DataRank · unranked

2 citations

Lingjie Liu, Adam Siepel, Yixin Zhao

Model-based characterization of the equilibrium dynamics of transcription initiation and promoter-proximal pausing in human cells

Research Square(2022)10.21203/rs.3.rs-2247832/v1

N/A

0DataRank · unranked

0 citations

Yixin Zhao, Lingjie Liu, Adam Siepel

Plasma cells in human pancreatic ductal adenocarcinoma secrete antibodies against self-antigens

JCI Insight(2023)10.1172/jci.insight.172449

N/A

0DataRank · unranked

16 citations

Jonathan Preall, Johannes T.‐H. Yeh, Darryl Pappin, Paolo Cifani, Yixin Zhao +13 more

Model-based characterization of the equilibrium dynamics of transcription initiation and promoter-proximal pausing in human cells

Nucleic Acids Research(2023)10.1093/nar/gkad843

N/A

0DataRank · unranked

14 citations

Lingjie Liu, R. P. Hassett, Adam Siepel, Yixin Zhao

DNA-sequence and epigenomic determinants of local rates of transcription elongation

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.21.572932

N/A

0DataRank · unranked

2 citations

Yixin Zhao, Adam Siepel, Lingjie Liu

Probabilistic and machine-learning methods for predicting local rates of transcription elongation from nascent RNA sequencing data

Nucleic Acids Research(2025)10.1093/nar/gkaf092

N/A

0DataRank · unranked

3 citations

Yixin Zhao, R. P. Hassett, Shushan Toneyan, Peter K. Koo, Adam Siepel +1 more

Characterizing RNA stability genome-wide through combined analysis of PRO-seq and RNA-seq data

BMC Biology(2021)10.1186/s12915-021-00949-x

N/A

0DataRank · unranked

65 citations

Yixin Zhao, Yi-Fei Huang, Noah Dukler, Edward J. Rice, Alexandra G. Chivu +4 more