Tuomas P. J. Knowles

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 5%percentile

0.518Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Learning the rules of peptide self-assembly through data mining with large language models

Science Advances(2025)10.1126/sciadv.adv1971

Top 37%

0.518DataRank

Top 37%20 citations

Sarah K. Yorke, Tuomas P. J. Knowles, Markus J. Buehler, Zhenze Yang

Papers

Driven by 28 papers — median percentile 63. Top paper: “Positional influence on cellular transcriptional identity revealed through spatially segmented single-cell transcriptomics”.

Positional influence on cellular transcriptional identity revealed through spatially segmented single-cell transcriptomics

Cell Systems(2023)10.1016/j.cels.2023.05.003

N/A

0.711DataRank · unranked

16 citations

Aleksandra M. Michalowski, Michele Ceribelli, Joachim De Jonghe, Maria Vias, Deanna Riley +12 more

Learning the rules of peptide self-assembly through data mining with large language models

Science Advances(2025)10.1126/sciadv.adv1971

Top 37%

0.518DataRank

Top 37%20 citations

Sarah K. Yorke, Tuomas P. J. Knowles, Markus J. Buehler, Zhenze Yang

Amyloid precipitation in biofluids using a structure-specific chemical antibody

Research Square(2020)10.21203/rs.3.rs-81521/v1

N/A

0DataRank · unranked

0 citations

Payel Bhattacharjee, Ann Brinkmalm, T. Dung, Colin M. Pearson, Suman De +14 more

In vivo rate-determining steps of tau seed accumulation in Alzheimer’s disease

Science Advances(2021)10.1126/sciadv.abh1448

N/A

0DataRank · unranked

133 citations

Eric Hidari, Kieren Allinson, Timothy Rittman, Sarah L. DeVos, Justin S. Sanchez +8 more

Scaling analysis reveals the mechanism and rates of prion replication in vivo

Nature Structural & Molecular Biology(2021)10.1038/s41594-021-00565-x

N/A

0DataRank · unranked

36 citations

Timothy D. Kurt, Itzel Condado Morales, Cyrus Bett, Silvia Sorce, Mario Nuvolone +10 more

Kinetic analysis reveals that independent nucleation events determine the progression of polyglutamine aggregation in C. elegans

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2021888118

N/A

0DataRank · unranked

23 citations

Georg Meisl, Thomas C. T. Michaels, Michele Vendruscolo, Tuomas P. J. Knowles, Richard I. Morimoto +1 more

Biomembranes in bioelectronic sensing

Trends in biotechnology(2021)10.1016/j.tibtech.2021.06.001

N/A

0DataRank · unranked

20 citations

Anna‐Maria Pappa, Surajit Ghosh, Zachary A. Manzer, Walther C. Traberg, Tuomas P. J. Knowles +3 more

Phase-separating RNA-binding proteins form heterogeneous distributions of clusters in subsaturated solutions

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2202222119

N/A

0DataRank · unranked

283 citations

Furqan Dar, Timothy J. Welsh, Laura T. Vogel, Ralf Kühnemuth, Anupa Majumdar +8 more

Phase separating RNA binding proteins form heterogeneous distributions of clusters in subsaturated solutions

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.03.478969

N/A

0DataRank · unranked

43 citations

Furqan Dar, Timothy J. Welsh, Laura T. Vogel, Ralf Kühnemuth, Anupa Majumdar +8 more

De Novo Human Angiotensin-Converting Enzyme 2 Decoy NL-CVX1 Protects Mice From Severe Disease After Severe Acute Respiratory Syndrome Coronavirus 2 Infection

The Journal of Infectious Diseases(2023)10.1093/infdis/jiad135

N/A

0DataRank · unranked

6 citations

Cong Tang, Ana R. Coelho, Carlos Labão‐Almeida, Matthias M. Schneider, Laurie Tatalick +13 more

Adsorption of RNA to interfaces of biomolecular condensates enables wetting transitions

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.12.523837

N/A

0DataRank · unranked

11 citations

Mina Farag, Daoyuan Qian, Tomas Šneideris, Timothy J. Welsh, Hannes Ausserwӧger +4 more

Glutamate helps unmask the differences in driving forces for phase separation versus clustering of FET family proteins in sub-saturated solutions

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.11.552963

N/A

0DataRank · unranked

2 citations

Laura T. Vogel, Gaurav Chauhan, Hannes Ausserwӧger, Timothy J. Welsh, Anjana R. Kamath +5 more

Glutamate helps unmask the differences in driving forces for phase separation versus clustering of FET family proteins in sub-saturated solutions

Research Square(2023)10.21203/rs.3.rs-3252197/v1

N/A

0DataRank · unranked

1 citations

Mrityunjoy Kar, Laura T. Vogel, Gaurav Chauhan, Hannes Ausserwoeger, Timothy J. Welsh +5 more

Assessment of fine-tuned large language models for real-world chemistry and material science applications

Chemical Science(2024)10.1039/d4sc04401k

N/A

0DataRank · unranked

51 citations

M.V. Gil, Kevin Maik Jablonka, Alex Abrudan, Andy S. Anker, Mehrdad Asgari +45 more

Protein Condensate Atlas from predictive models of heteromolecular condensate composition

Nature Communications(2024)10.1038/s41467-024-48496-7

N/A

0DataRank · unranked

23 citations

Rob Scrutton, Kotryna Bloznelyte, Alexey S. Morgunov, Lydia L. Good, Alpha A. Lee +3 more

Dominance analysis to assess solute contributions to multicomponent phase equilibria

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2407453121

N/A

0DataRank · unranked

22 citations

Hannes Ausserwӧger, Tomas Šneideris, Mina Farag, Rohit V. Pappu, Tuomas P. J. Knowles +1 more

Solutes unmask differences in clustering versus phase separation of FET proteins

Nature Communications(2024)10.1038/s41467-024-48775-3

N/A

0DataRank · unranked

23 citations

Laura T. Vogel, Gaurav Chauhan, Suren Felekyan, Hannes Ausserwӧger, Timothy J. Welsh +7 more

Assessment of Fine-Tuned Large Language Models for Real-World Chemistry and Material Science Applications

ChemRxiv(2024)10.26434/chemrxiv-2024-mm31v

N/A

0DataRank · unranked

2 citations

M.V. Gil, Kevin Maik Jablonka, Alex Abrudan, Andy S. Anker, Mehrdad Asgari +41 more

Learning the rules of peptide self-assembly through data mining with large language models

arXiv (Cornell University)(2024)10.48550/arxiv.2411.05421

N/A

0DataRank · unranked

0 citations

Sarah K. Yorke, Tuomas P. J. Knowles, Markus J. Buehler, Zhenze Yang

Current practices in the study of biomolecular condensates: a community comment

Nature Communications(2025)10.1038/s41467-025-62055-8

N/A

0DataRank · unranked

72 citations

Paolo Arosio, Robert B. Best, Steven Boeynaems, Danfeng Cai, Rosana Collepardo‐Guevara +29 more

Synapsin Condensation is Governed by Sequence-Encoded Molecular Grammars

Journal of Molecular Biology(2025)10.1016/j.jmb.2025.168987

N/A

0DataRank · unranked

20 citations

Kiersten M. Ruff, Irina A. Edu, Min Kyung Shinn, Johannes Vincent Tromm, Matthew R. King +7 more

ANXA11 biomolecular condensates facilitate protein-lipid phase coupling on lysosomal membranes

Nature Communications(2025)10.1038/s41467-025-58142-5

N/A

0DataRank · unranked

17 citations

Francesco Simone Ruggeri, Seema Qamar, Therese W. Herling, Magdalena A. Czekalska, Yi Shen +23 more

Differential interactions determine anisotropies at interfaces of RNA-based biomolecular condensates

Nature Communications(2025)10.1038/s41467-025-58736-z

N/A

0DataRank · unranked

16 citations

Mina Farag, Yuanxin Qiu, Daoyuan Qian, Tomas Šneideris, Tingting Wu +9 more

Multiplex neurodegeneration proteotoxicity platform reveals DNAJB6 promotes non-toxic FUS condensate gelation and inhibits neurotoxicity

Nature Communications(2025)10.1038/s41467-025-65178-0

N/A

0DataRank · unranked

3 citations

Seema Qamar, Pushya Krishna, Vladislav A. Korobeynikov, Hannes Ausserwӧger, Alyssa Miller +26 more

Transforming an ATP-dependent enzyme into a dissipative, self-assembling system

Nature Chemical Biology(2025)10.1038/s41589-024-01811-1

N/A

0DataRank · unranked

2 citations

Jie Zhu, Zhi-Yin Zhang, Jiapeng Wei, Fengbin Wang, Georg Meisl +4 more

Converting lateral scanning into axial focusing to speed up three-dimensional microscopy

Light Science & Applications(2020)10.1038/s41377-020-00401-9

N/A

0DataRank · unranked

50 citations

Bingying Chen, Stephan Daetwyler, Bo-Jui Chang, Oliver Vanderpoorten, Etai Sapoznik +5 more

Competing addition processes give distinct growth regimes in the assembly of 1D filaments

Biophysical Journal(2025)10.1016/j.bpj.2025.01.018

N/A

0DataRank · unranked

1 citations

Tyler Brown, Stephen Whitelam, Georg Meisl, Tuomas P. J. Knowles, Jeremy D. Schmit +1 more

Kinetic analysis reveals the rates and mechanisms of protein aggregation in a multicellular organism

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.13.249862

N/A

0DataRank · unranked

1 citations

Georg Meisl, Thomas C. T. Michaels, Michele Vendruscolo, Tuomas P. J. Knowles, Richard I. Morimoto +1 more

Tuomas P. J. Knowles

Indexed papers

Top data-sharing exemplar

Papers