Angela N. Brooks

Also affiliated with Santa Cruz County Office of Education

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

24.5Author DataRank

Indexed papers

7in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 7 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Full-length transcript characterization of SF3B1 mutation in chronic lymphocytic leukemia reveals downregulation of retained introns

Nature Communications(2020)10.1038/s41467-020-15171-6

Top 3%

6.2DataRank

Top 3%566 citations

Cameron M. Soulette, Marijke J. van Baren, Kevyn L. Hart, Eva Hrabeta‐Robinson, Catherine J. Wu +2 more

Papers

Driven by 28 papers — median percentile 92. Top paper: “Full-length transcript characterization of SF3B1 mutation in chronic lymphocytic leukemia reveals downregulation of retained introns”.

Full-length transcript characterization of SF3B1 mutation in chronic lymphocytic leukemia reveals downregulation of retained introns

Nature Communications(2020)10.1038/s41467-020-15171-6

Top 3%

6.2DataRank

Top 3%566 citations

Cameron M. Soulette, Marijke J. van Baren, Kevyn L. Hart, Eva Hrabeta‐Robinson, Catherine J. Wu +2 more

Pan-cancer analysis of whole genomes

Nature(2020)10.1038/s41586-020-1969-6

Top 3%

5.9DataRank

Top 3%3307 citations

Lauri A. Aaltonen, Federico Abascal, Adam Abeshouse, Hiroyuki Aburatani, David J. Adams +1244 more

Analyses of non-coding somatic drivers in 2,658 cancer whole genomes

Nature(2020)10.1038/s41586-020-1965-x

Top 5%

4.6DataRank

Top 5%668 citations

Federico Abascal, Jeremiah A. Wala, Ofer Shapira, Grace Tiao, Henrik Hornshøj +1240 more

Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

Nature Methods(2024)10.1038/s41592-024-02298-3

Top 8%

2.8DataRank

Top 8%216 citations

Dingjie Wang, Fairlie Reese, Mark Diekhans, Sílvia Carbonell Sala, Brian A. Williams +80 more

Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE

Science(2010)10.1126/science.1198374

Top 9%

2.4DataRank

Top 9%1089 citations

Sushmita Roy, Jason Ernst, Peter V. Kharchenko, Yanxiao Zhang, Richard S. Sandstrom +172 more

RBM25 is a global splicing factor promoting inclusion of alternatively spliced exons and is itself regulated by lysine mono-methylation

Journal of Biological Chemistry(2017)10.1074/jbc.m117.784371

N/A

2.3DataRank · unranked

61 citations

Cameron M. Soulette, Ze Yang, Joshua E. Elias, Angela N. Brooks, Or Gozani +1 more

Proteasome inhibitor-induced modulation reveals the spliceosome as a specific therapeutic vulnerability in multiple myeloma

Nature Communications(2020)10.1038/s41467-020-15521-4

N/A

1.8DataRank · unranked

47 citations

Ian Ferguson, Alexis M. Thornton, Prabhakar Bastola, Christine Lam, Yu-Hsiu T. Lin +14 more

High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations

Nature Communications(2020)10.1038/s41467-019-13885-w

Top 13%

1.6DataRank

Top 13%76 citations

Fengju Chen, Nuno A. Fonseca, Yao He, Masashi Fujita, Hidewaki Nakagawa +91 more

Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.25.550582

Top 20%

0.991DataRank

Top 20%28 citations

Dingjie Wang, Fairlie Reese, Mark Diekhans, Sílvia Carbonell Sala, Brian A. Williams +78 more

Author Correction: Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis

Communications Biology(2022)10.1038/s42003-022-03769-z

N/A

0.165DataRank · unranked

2 citations

Lars Feuerbach, Chen Hong, David Mas-Ponte, Randi Istrup Pedersen, PCAWG Drivers and Functional Interpretation Group +1255 more

Mutant KRAS regulates transposable element RNA and innate immunity via KRAB zinc-finger genes

Cell Reports(2022)10.1016/j.celrep.2022.111104

N/A

0DataRank · unranked

17 citations

Sreelakshmi Velandi Maroli, Haley Halasz, Mehmet Ozgün Ozen, Eva Hrabeta‐Robinson, Amit K. Behera +13 more

Identification of cancer drivers from tumor-only RNA-seq with RNA-VACAY

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.10.491431

N/A

0DataRank · unranked

1 citations

Allysia J. Mak, Julie L. Aspden, Angela N. Brooks, Jon Akutagawa

An expression-based variant impact phenotyping protocol to predict the impact of gene variants in cell lines

Cáritas(2022)10.1016/j.xpro.2022.101651

N/A

0DataRank · unranked

0 citations

Manoj Tumu, Angela N. Brooks, Alexis M. Thornton

DeepSea is an efficient deep-learning model for single-cell segmentation and tracking in time-lapse microscopy

Cell Reports Methods(2023)10.1016/j.crmeth.2023.100500

N/A

0DataRank · unranked

24 citations

Gerrald A. Lodewijk, Najmeh Mashhadi, Nathan Cook, Celine Neudorf, Kimiasadat Araghbidikashani +8 more

Full-length transcript alterations in human bronchial epithelial cells withU2AF1S34F mutations

Life Science Alliance(2023)10.26508/lsa.202000641

N/A

0DataRank · unranked

4 citations

Eva Hrabeta‐Robinson, Carlos Arevalo, Colette Felton, Alison D. Tang, Maximillian G. Marin +2 more

MET exon 14 skipping is overexpressed in an allele-specific manner in lung adenocarcinoma primary samples

PubMed(2023)10.17912/micropub.biology.000957

N/A

0DataRank · unranked

0 citations

Swetha Vadde, Angela N. Brooks, Megan M. Durham

Steering research on mRNA splicing in cancer towards clinical translation

Nature reviews. Cancer(2024)10.1038/s41568-024-00750-2

N/A

0DataRank · unranked

40 citations

Frédéric H.‐T. Allain, Brittany Angarola, Douglas L. Black, Angela N. Brooks, Chonghui Cheng +14 more

SMAdd-seq: Probing chromatin accessibility with small molecule DNA intercalation and nanopore sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.20.585815

N/A

0DataRank · unranked

1 citations

Namrita Dhillon, Colette Felton, Brett Meissner, Brandon Saint-John, Robert Shelansky +6 more

SMAdd-seq: probing chromatin accessibility with small molecule DNA intercalation and nanopore sequencing

Nucleic Acids Research(2025)10.1093/nar/gkaf671

N/A

0DataRank · unranked

1 citations

Namrita Dhillon, Colette Felton, Brett Meissner, Brandon Saint-John, Robert Shelansky +6 more

Author Correction: Combined burden and functional impact tests for cancer driver discovery using DriverPower

Nature Communications(2022)10.1038/s41467-022-32343-8

N/A

0DataRank · unranked

0 citations

PCAWG Drivers and Functional Interpretation Working Group, Federico Abascal, Samirkumar B. Amin, Pratiti Bandopadhayay, Rameen Beroukhim +1242 more

Comprehensive molecular profiling of lung adenocarcinoma: The cancer genome atlas research network

UNC Libraries(2020)10.17615/s7re-zq82

N/A

0DataRank · unranked

31 citations

Marc Ladanyi, William Lee, David G. Beer, Bryan Hernandez, David J. Kwiatkowski +27 more

Transcriptome analysis of alternative splicing-coupled nonsense-mediated mRNA decay in human cells reveals broad regulatory potential

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.01.183327

N/A

0DataRank · unranked

11 citations

Gang Wei, James P. B. Lloyd, Zhiqiang Hu, Angela N. Brooks, Steven E. Brenner +1 more

Inflammation Drives Alternative First Exon usage to Regulate Immune Genes including a Novel Iron Regulated Isoform of Aim2

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.06.190330

N/A

0DataRank · unranked

6 citations

Pratibha Jagannatha, Sergio Covarrubias, Matthew A. Cattle, Rojin Safavi, Ran Song +10 more

Multiplatform Analysis of 12 Cancer Types Reveals Molecular Classification within and across Tissues of Origin

UNC Libraries(2020)10.17615/3e2x-wy62

N/A

0DataRank · unranked

0 citations

David A. Wheeler, Zhong Chen, Lynda Chin, Todd Pihl, Tai Hsien Ou Yang +95 more

Reintroduction of the archaic variant of NOVA1 in cortical organoids alters neurodevelopment

Science(2021)10.1126/science.aax2537

N/A

0DataRank · unranked

143 citations

Edward S. Rice, Nathan K. Schaefer, Isaac A. Chaim, Emily C. Wheeler, Assael A. Madrigal +22 more

eVIP2: Expression-based variant impact phenotyping to predict the function of gene variants

PLoS Computational Biology(2021)10.1371/journal.pcbi.1009132

N/A

0DataRank · unranked

11 citations

Lishan Fang, April Lo, Maria McSharry, David Haan, Casey O’Brien +4 more

DeepSea: An efficient deep learning model for single-cell segmentation and tracking of time-lapse microscopy images

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.10.434806

N/A

0DataRank · unranked

13 citations

Gerrald A. Lodewijk, Najmeh Mashhadi, Nathan Cook, Celine Neudorf, Kimiasadat Araghbidikashani +6 more

Cell Painting predicts impact of lung cancer variants

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.18.469171

N/A

0DataRank · unranked

8 citations

John Arévalo, Federica Piccioni, Mark‐Anthony Bray, Cathy L Hartland, Xiaoyun Wu +6 more

Angela N. Brooks

Indexed papers

Top data-sharing exemplar

Papers