🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Omar O. Abudayyeh

Brigham and Women's Hospital

ORCID: 0000-0002-7979-3220

Also affiliated with Beth Israel Deaconess Medical Center, Harvard University, McGovern Institute for Brain Research, Cell and Gene Therapy Catapult, Harvard Stem Cell Institute, Mass General Brigham, Massachusetts Institute of Technology

Biochemistry, Genetics and Molecular BiologyEngineering

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
8.8Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A global metagenomic map of urban microbiomes and antimicrobial resistance

Cell(2021)10.1016/j.cell.2021.05.002
Top 4%
5.1DataRank
Top 4%390 citations

Daniela Bezdan, Evan E. Afshin, Sofia Ahsanuddin, Chandrima Bhattacharya, Daniel Butler +95 more

Papers

Driven by 19 papers — median percentile 95. Top paper: “Detection of SARS-CoV-2 with SHERLOCK One-Pot Testing”.

Detection of SARS-CoV-2 with SHERLOCK One-Pot Testing

New England Journal of Medicine(2020)10.1056/nejmc2026172
N/A
14.8DataRank · unranked
809 citations

Alim Ladha, Makoto Saito, Nam-Gyun Kim, Ann E. Woolley, Michael Segel +18 more

A global metagenomic map of urban microbiomes and antimicrobial resistance

Cell(2021)10.1016/j.cell.2021.05.002
Top 4%
5.1DataRank
Top 4%390 citations

Daniela Bezdan, Evan E. Afshin, Sofia Ahsanuddin, Chandrima Bhattacharya, Daniel Butler +95 more

A transcription factor atlas of directed differentiation

Cell(2023)10.1016/j.cell.2022.11.026
Top 6%
3.6DataRank
Top 6%232 citations

Sai Ma, Tristan Tay, Paul C. Kirchgatterer, Vanessa K. Verdine, Baolin Guo +14 more

C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effector

bioRxiv (Cold Spring Harbor Laboratory)(2016)10.1101/054742
N/A
1.8DataRank · unranked
46 citations

Jonathan S. Gootenberg, Silvana Konermann, Julia Joung, Ian M. Slaymaker, David B.T. Cox +11 more

Cpf1 Is a Single RNA-Guided Endonuclease of a Class 2 CRISPR-Cas System

Cell(2015)10.1016/j.cell.2015.09.038
N/A
1.3DataRank · unranked
4816 citations

Jonathan S. Gootenberg, Omar O. Abudayyeh, Ian M. Slaymaker, Kira S. Makarova, Patrick Essletzbichler +7 more

Nucleic acid detection with CRISPR-Cas13a/C2c2

Science(2017)10.1126/science.aam9321
N/A
1.2DataRank · unranked
3722 citations

Omar O. Abudayyeh, Jeong Wook Lee, Patrick Essletzbichler, Aaron J. Dy, Julia Joung +15 more

Discovery of Diverse CRISPR-Cas Systems and Expansion of the Genome Engineering Toolbox

Biochemistry(2023)10.1021/acs.biochem.3c00159
N/A
0.683DataRank · unranked
94 citations

Jonathan S. Gootenberg, Omar O. Abudayyeh, Eugene V. Koonin

A transcription factor atlas of directed differentiation

Cell(2024)10.1016/j.cell.2024.04.038
N/A
0.567DataRank · unranked
14 citations

Sai Ma, Tristan Tay, Paul C. Kirchgatterer, Vanessa K. Verdine, Baolin Guo +14 more

Precise kilobase-scale genomic insertions in mammalian cells using PASTE

Nature Protocols(2024)10.1038/s41596-024-01090-z
N/A
0.448DataRank · unranked
7 citations

Cian Schmitt-Ulms, Dario Tagliaferri, Jonathan S. Gootenberg, Omar O. Abudayyeh, Christopher W. Fell

Invigorating discovery and clinical translation of aging biomarkers

Nature Aging(2025)10.1038/s43587-025-00838-w
N/A
0.330DataRank · unranked
6 citations

Chiara Herzog, Kejun Ying, Alan Tomusiak, Jessica Kasamoto, Raghav Sehgal +41 more

Programmable eukaryotic protein synthesis with RNA sensors by harnessing ADAR

Nature Biotechnology(2022)10.1038/s41587-022-01534-5
N/A
0DataRank · unranked
112 citations

Jeremy Koob, Xi Chen, Rohan N. Krajeski, Yifan Zhang, Verena Volf +7 more

RNA-activated protein cleavage with a CRISPR-associated endopeptidase

Science(2022)10.1126/science.add7450
N/A
0DataRank · unranked
82 citations

F. Esra Demircioglu, David Li, Guilhem Faure, Max E. Wilkinson, Jonathan S. Gootenberg +5 more

RNA-triggered protein cleavage and cell growth arrest by the type III-E CRISPR nuclease-protease

Science(2022)10.1126/science.add7347
N/A
0DataRank · unranked
57 citations

Sae Okazaki, Cian Schmitt-Ulms, Kaiyi Jiang, Wenyuan Zhou, Junichiro Ishikawa +9 more

Programmable eukaryotic protein expression with RNA sensors

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.26.477951
N/A
0DataRank · unranked
9 citations

Jeremy Koob, Xi Chen, Rohan N. Krajeski, Yifan Zhang, Lukas Villiger +5 more

RNA-triggered protein cleavage and cell death by the RNA-guided type III-E CRISPR-Cas nuclease-protease complex

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.17.504292
N/A
0DataRank · unranked
5 citations

Sae Okazaki, Cian Schmitt-Ulms, Kaiyi Jiang, Wenyuan Zhou, Junichiro Ishikawa +9 more

Drag-and-drop genome insertion of large sequences without double-strand DNA cleavage using CRISPR-directed integrases

Nature Biotechnology(2022)10.1038/s41587-022-01527-4
N/A
0DataRank · unranked
437 citations

Eleonora Ioannidi, Cian Schmitt-Ulms, Rohan N. Krajeski, Justin Lim, Lukas Villiger +23 more

Drag-and-drop genome insertion without DNA cleavage with CRISPR-directed integrases

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.01.466786
N/A
0DataRank · unranked
33 citations

Matthew T. N. Yarnall, Cian Schmitt-Ulms, Rohan N. Krajeski, Justin Lim, Lukas Villiger +12 more

Rapid protein evolution by few-shot learning with a protein language model

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.17.604015
N/A
0DataRank · unranked
8 citations

Zhaoqing Yan, Matteo Di Bernardo, Samantha R. Sgrizzi, Lukas Villiger, Alişan Kayabölen +7 more

Point-of-care testing for COVID-19 using SHERLOCK diagnostics

medRxiv(2020)10.1101/2020.05.04.20091231
N/A
0DataRank · unranked
337 citations

Alim Ladha, Makoto Saito, Michael Segel, Robert Bruneau, Mee-li W. Huang +10 more