Jonathan A. Shortt

University of Colorado Anschutz Medical Campus

Biochemistry, Genetics and Molecular BiologyImmunology and MicrobiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 6%percentile

0.269Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Global multi-ancestry genetic study elucidates genes and biological pathways associated with thyroid cancer and benign thyroid diseases

medRxiv(2025)10.1101/2025.05.15.25327513

Top 70%

0.165DataRank

Top 70%2 citations

Maizy S. Brasher, Jack Pattee, Wei Zhou, Sinéad B. Chapman, Yon Ho Jee +79 more

Papers

Driven by 30 papers — median percentile 26. Top paper: “Global Biobank analyses provide lessons for developing polygenic risk scores across diverse cohorts”.

Global Biobank analyses provide lessons for developing polygenic risk scores across diverse cohorts

Cell Genomics(2023)10.1016/j.xgen.2022.100241

N/A

0.710DataRank · unranked

113 citations

Shinichi Namba, Esteban A. Lopera-Maya, Sini Kerminen, Kristin Tsuo, Kristi Läll +83 more

Meta-analysis fine-mapping is often miscalibrated at single-variant resolution

Cell Genomics(2022)10.1016/j.xgen.2022.100210

N/A

0.670DataRank · unranked

86 citations

Roy Elzur, Wei Zhou, Kuan-Han Wu, Humaira Rasheed, Kristin Tsuo +91 more

Finding and extending ancient simple sequence repeat-derived regions in the human genome

Mobile DNA(2020)10.1186/s13100-020-00206-y

N/A

0.593DataRank · unranked

51 citations

Robert P. Ruggiero, Corey Cox, Aaron Wacholder, David D. Pollock, Jonathan A. Shortt

Building a vertically integrated genomic learning health system: The biobank at the Colorado Center for Personalized Medicine

The American Journal of Human Genetics(2024)10.1016/j.ajhg.2023.12.001

N/A

0.571DataRank · unranked

44 citations

Jonathan A. Shortt, Emily R. Roberts, Joe A. Lesny, Elizabeth Kudron, Meng Lin +49 more

Allele imputation for the killer cell immunoglobulin-like receptor KIR3DL1/S1

PLoS Computational Biology(2022)10.1371/journal.pcbi.1009059

N/A

0.360DataRank · unranked

10 citations

Laura Ann Leaton, Erica A. Harrison, Katherine M. Kichula, Marte K. Viken, Jonathan A. Shortt +6 more

Polygenic risk score for type 2 diabetes shows context-dependent effects across populations

Nature Communications(2025)10.1038/s41467-025-63546-4

N/A

0.345DataRank · unranked

9 citations

Yanwei Cai, Daeeun Kim, Roelof A. J. Smit, Zhe Wang, Kruthika R. Iyer +169 more

Type 2 diabetes polygenic risk score demonstrates context-dependent effects and associations with type 2 diabetes-related risk factors and complications across diverse populations

medRxiv(2025)10.1101/2025.02.15.25322341

N/A

0.342DataRank · unranked

4 citations

Yanwei Cai, Daeeun Kim, Roelof A. J. Smit, Zhe Wang, Kruthika Iyer +68 more

Building a Vertically-Integrated Genomic Learning Health System: The Colorado Center for Personalized Medicine Biobank

medRxiv(2022)10.1101/2022.06.09.22276222

N/A

0.330DataRank · unranked

8 citations

Jonathan A. Shortt, Emily R. Roberts, Joe A. Lesny, Elizabeth Kudron, Meng Lin +50 more

COVID-19 Surveillance in the Biobank at the Colorado Center for Personalized Medicine: Observational Study

JMIR Public Health and Surveillance(2022)10.2196/37327

N/A

0.312DataRank · unranked

7 citations

Katie M. Marker, David A Mayer, Jonathan A. Shortt, David Kao, Kathleen C. Barnes +3 more

Population genomic analyses of schistosome parasites highlight critical challenges facing end-game elimination efforts

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.30.070656

N/A

0.241DataRank · unranked

4 citations

Laura E. Timm, Nicole R. Hales, Zachary L. Nikolakis, Drew R. Schield, Blair W. Perry +6 more

Health care utilization of fine-scale identity by descent clusters in a Los Angeles biobank

medRxiv(2022)10.1101/2022.07.12.22277520

N/A

0.241DataRank · unranked

4 citations

Arya Boudaie, Ruhollah Shemirani, Ella Petter, Alec Chiu, Ruth Johnson +10 more

Global multi-ancestry genetic study elucidates genes and biological pathways associated with thyroid cancer and benign thyroid diseases

medRxiv(2025)10.1101/2025.05.15.25327513

Top 70%

0.165DataRank

Top 70%2 citations

Maizy S. Brasher, Jack Pattee, Wei Zhou, Sinéad B. Chapman, Yon Ho Jee +79 more

Ancestry Calibration of Polygenic Risk Scores Improves Risk Stratification and Effect Estimation in African American Adults

medRxiv(2025)10.1101/2025.06.18.25329573

N/A

0.123DataRank · unranked

1 citations

Mariah Meyer, Iain R. Konigsberg, Aastha Kakar, Patrick M. Carry, Yun Li +14 more

COVID-19 Surveillance in the Biobank at the Colorado Center for Personalized Medicine

medRxiv(2022)10.1101/2022.02.15.22271018

Top 78%

0.104DataRank

Top 78%1 citations

Katie M. Marker, David A Mayer, Jonathan A. Shortt, David Kao, Kathleen C. Barnes +3 more

Admix-kit: an integrated toolkit and pipeline for genetic analyses of admixed populations

UNC Libraries(2025)10.17615/6srp-f244

N/A

0DataRank · unranked

0 citations

Elizabeth G. Atkinson, Jibril Hirbo, Bogdan Paşaniuc, Stephanie M. Gogarten, Quan Sun +11 more

Dysregulated Fatty Acid Metabolism in Preeclampsia Among Highland Andeans: Insights Into Adaptive and Maladaptive Placental Metabolic Phenotypes

The FASEB Journal(2025)10.1096/fj.202502590r

N/A

0DataRank · unranked

0 citations

Lilian Toledo‐Jaldin, Wanjun Gu, Julie A. Houck, Litzi Lazo‐Vega, Valquiria Miranda‐Garrido +10 more

Expanding the genetic landscape of endometriosis: Integrative -omics analyses implicate key genes and pathways in a multi-ancestry study of over one million women

Research Square(2025)10.21203/rs.3.rs-8116602/v1

N/A

0DataRank · unranked

0 citations

Lindsay Guare, Jagyashila Das, Lannawill Caruth, Ananya Rajagopalan, Alexis T. Akerele +31 more

Genetically Determined Strength of Natural Killer Cells is Enhanced by Adaptive HLA class I Admixture in East Asians

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.29.227579

N/A

0DataRank · unranked

4 citations

Jianxin Zhen, Genelle F. Harrison, Guobin Zhang, Rui Chen, Ge Sun +15 more

Adaptive Admixture of HLA Class I Allotypes Enhanced Genetically Determined Strength of Natural Killer Cells in East Asians

Molecular Biology and Evolution(2021)10.1093/molbev/msab053

N/A

0DataRank · unranked

29 citations

Jianxin Zhen, Genelle F. Harrison, Guobin Zhang, Rui Chen, Ge Sun +16 more

Population genomic analyses of schistosome parasites highlight critical challenges facing endgame elimination efforts

Scientific Reports(2021)10.1038/s41598-021-86287-y

N/A

0DataRank · unranked

16 citations

Laura E. Timm, Nicole R. Hales, Zachary L. Nikolakis, Drew R. Schield, Blair W. Perry +6 more

Allele imputation for the Killer cell Immunoglobulin-like Receptor KIR3DL1/S1

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.13.443975

N/A

0DataRank · unranked

2 citations

Laura Ann Leaton, Erica A. Harrison, Marte K. Viken, Jonathan A. Shortt, Christopher R. Gignoux +5 more

Disease risk and healthcare utilization among ancestrally diverse groups in the Los Angeles region

Nature Medicine(2023)10.1038/s41591-023-02425-1

N/A

0DataRank · unranked

14 citations

Arya Boudaie, Ruhollah Shemirani, Joel Mefford, Ella Petter, Alec Chiu +14 more

Altered placental ion channel gene expression in preeclamptic high-altitude pregnancies

Physiological Genomics(2023)10.1152/physiolgenomics.00013.2023

N/A

0DataRank · unranked

11 citations

Julie A. Houck, Sahand Fallahi, Litzi Lazo‐Vega, Christopher J. Matarazzo, Breea Diamond +7 more

Genomic Selection Signals in Andean Highlanders Reveal Adaptive Placental Metabolic Phenotypes That Are Disrupted in Preeclampsia

Hypertension(2023)10.1161/hypertensionaha.123.21748

N/A

0DataRank · unranked

11 citations

Wanjun Gu, Julie A. Houck, Lorenz M.W. Holzner, Hong Wa Yung, Jenna L. Armstrong +16 more

Admix-kit: An Integrated Toolkit and Pipeline for Genetic Analyses of Admixed Populations

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.30.560263

N/A

0DataRank · unranked

9 citations

Stephanie M. Gogarten, Joohyun Kim, Xing Hua, Julie‐Alexia Dias, Quan Sun +10 more

Novel ancestry-specific primary open-angle glaucoma loci and shared biology with vascular mechanisms and cell proliferation

Cell Reports Medicine(2024)10.1016/j.xcrm.2024.101430

N/A

0DataRank · unranked

29 citations

Arjun Bhattacharya, Wei Zhou, Dan Zhou, Ying Wang, Kristi Läll +31 more

Admix-kit: an integrated toolkit and pipeline for genetic analyses of admixed populations

Bioinformatics(2024)10.1093/bioinformatics/btae148

N/A

0DataRank · unranked

16 citations

Stephanie M. Gogarten, Joohyun Kim, Xing Hua, Julie‐Alexia Dias, Quan Sun +89 more

Expanding the genetic landscape of endometriosis: Integrative -omics analyses implicate key genes and pathways in a multi-ancestry study of over one million women

medRxiv(2024)10.1101/2024.11.26.24316723

N/A

0DataRank · unranked

7 citations

Jagyashila Das, Lannawill Caruth, Ananya Rajagopalan, Alexis T. Akerele, Ben Brumpton +33 more

GenoSiS: A Biobank-Scale Genotype Similarity Search Architecture for Creating Dynamic Patient-Match Cohorts

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.02.621671

N/A

0DataRank · unranked

0 citations

Murad Chowdhury, Mariano Tepper, Jawad Khan, Jonathan A. Shortt, Chris Gignoux +2 more

Enabling reproducible type 1 diabetes polygenic risk scoring for clinical and translational applications

medRxiv(2025)10.1101/2025.07.15.25331523

N/A

0DataRank · unranked

1 citations

Matthew J. Fisher, C. Wild, Jonathan A. Shortt, Krista Miller, Randi K. Johnson +13 more

Jonathan A. Shortt

Indexed papers

Top data-sharing exemplar

Papers