🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Kirill E. Medvedev

University of Central Florida

ORCID: 0000-0002-7982-4242
Biochemistry, Genetics and Molecular BiologyMedicineMaterials ScienceComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile
1.5Author DataRank

Indexed papers

5in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

ECOD domain classification of 48 whole proteomes from AlphaFold Structure Database using DPAM2

PLoS Computational Biology(2024)10.1371/journal.pcbi.1011586
Top 26%
0.763DataRank
Top 26%24 citations

Jing Zhang, Kirill E. Medvedev, Lisa N. Kinch, Qian Cong, Nick V. Grishin +1 more

Papers

Driven by 17 papers — median percentile 40. Top paper: “ECOD domain classification of 48 whole proteomes from AlphaFold Structure Database using DPAM2”.

ECOD domain classification of 48 whole proteomes from AlphaFold Structure Database using DPAM2

PLoS Computational Biology(2024)10.1371/journal.pcbi.1011586
Top 26%
0.763DataRank
Top 26%24 citations

Jing Zhang, Kirill E. Medvedev, Lisa N. Kinch, Qian Cong, Nick V. Grishin +1 more

Structure classification of the proteins from Salmonella enterica pangenome revealed novel potential pathogenicity islands

Scientific Reports(2024)10.1038/s41598-024-60991-x
Top 42%
0.455DataRank
Top 42%12 citations

Jing Zhang, R. Dustin Schaeffer, Lisa N. Kinch, Qian Cong, Nick V. Grishin +1 more

DisEnrich: database of enriched regions in human dark proteome

Bioinformatics(2022)10.1093/bioinformatics/btac051
Top 60%
0.253DataRank
Top 60%4 citations

Jimin Pei, Nick V. Grishin, Kirill E. Medvedev

Deep learning for subtypes identification of pure seminoma of the testis

medRxiv(2022)10.1101/2022.05.16.22275153
N/A
0DataRank · unranked
0 citations

Paul H. Acosta, Liwei Jia, Nick V. Grishin, Kirill E. Medvedev

Pathogenic mutation hotspots in protein kinase domain structure

Protein Science(2023)10.1002/pro.4750
N/A
0DataRank · unranked
15 citations

R. Dustin Schaeffer, Jimin Pei, Nick V. Grishin, Kirill E. Medvedev

Pan-cancer structurome reveals overrepresentation of beta sandwiches and underrepresentation of alpha helical domains

Scientific Reports(2023)10.1038/s41598-023-39273-5
N/A
0DataRank · unranked
7 citations

R. Dustin Schaeffer, Kenneth S. Chen, Nick V. Grishin, Kirill E. Medvedev

Deep Learning for Subtypes Identification of Pure Seminoma of the Testis

Clinical Pathology(2024)10.1177/2632010x241232302
N/A
0DataRank · unranked
4 citations

Paul H. Acosta, Liwei Jia, Nick V. Grishin, Kirill E. Medvedev

Structure classification of the proteins from Salmonella enterica pangenome revealed novel potential pathogenicity islands

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.30.577995
N/A
0DataRank · unranked
0 citations

Jing Zhang, R. Dustin Schaeffer, Lisa N. Kinch, Qian Cong, Nick V. Grishin +1 more

DrugDomain: the evolutionary context of drugs and small molecules bound to domains

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.20.585940
N/A
0DataRank · unranked
0 citations

R. Dustin Schaeffer, Nick V. Grishin, Kirill E. Medvedev

Leveraging AI to explore structural contexts of post-translational modifications in drug binding

Journal of Cheminformatics(2025)10.1186/s13321-025-01019-y
N/A
0DataRank · unranked
17 citations

R. Dustin Schaeffer, Nick V. Grishin, Kirill E. Medvedev

Leveraging AI to Explore Structural Contexts of Post-Translational Modifications in Drug Binding

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.14.633078
N/A
0DataRank · unranked
2 citations

R. Dustin Schaeffer, Nick V. Grishin, Kirill E. Medvedev

Bacterial Schlafens mediate anti-phage defense

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.24.666596
N/A
0DataRank · unranked
2 citations

Yimo Wu, Riley Cassidy, Kirill E. Medvedev, Luuk Loeff, Anna Nemudraia +2 more

DrugDomain 2.0: comprehensive database of protein domains-ligands/drugs interactions across the whole Protein Data Bank

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.03.663025
Top 100%
0DataRank
Top 100%0 citations

R. Dustin Schaeffer, Nick V. Grishin, Kirill E. Medvedev

A Fifth of the Protein World: Rossmann-like Proteins as an Evolutionarily Successful Structural unit

Journal of Molecular Biology(2020)10.1016/j.jmb.2020.166788
N/A
0DataRank · unranked
92 citations

Lisa N. Kinch, R. Dustin Schaeffer, Jimin Pei, Nick V. Grishin, Kirill E. Medvedev

DrugDomain 2.0: Comprehensive database of protein domains-ligands/drugs interactions across the whole Protein Data Bank

Computational and Structural Biotechnology Journal(2025)10.1016/j.csbj.2025.09.018
Top 100%
0DataRank
Top 100%0 citations

R. Dustin Schaeffer, Nick V. Grishin, Kirill E. Medvedev

Recent advances suggest increased influence of selective pressure in allostery

Current Opinion in Structural Biology(2020)10.1016/j.sbi.2020.02.004
N/A
0DataRank · unranked
18 citations

R. Dustin Schaeffer, Lisa N. Kinch, Kirill E. Medvedev, Nick V. Grishin, Archana Bhat

Integrated Molecular Analysis Reveals 2 Distinct Subtypes of Pure Seminoma of the Testis

Cancer Informatics(2022)10.1177/11769351221132634
N/A
0DataRank · unranked
18 citations

Anna Savelyeva, Kenneth S. Chen, Aditya Bagrodia, Liwei Jia, Nick V. Grishin +1 more