🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Doreen Ware

Cornell University

ORCID: 0000-0002-8125-3821

Also affiliated with Cold Spring Harbor Laboratory, Robert W. Holley Center for Agriculture & Health, Ithaca College

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
22.3Author DataRank

Indexed papers

12in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 12 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Ensembl 2024

Nucleic Acids Research(2023)10.1093/nar/gkad1049
Top 3%
5.9DataRank
Top 3%747 citations

M Ridwan Amode, Olanrewaju Austine-Orimoloye, Andrey G Azov, Matthieu Barba, If Barnes +93 more

Papers

Driven by 20 papers — median percentile 86. Top paper: “Ensembl 2024”.

Ensembl 2024

Nucleic Acids Research(2023)10.1093/nar/gkad1049
Top 3%
5.9DataRank
Top 3%747 citations

M Ridwan Amode, Olanrewaju Austine-Orimoloye, Andrey G Azov, Matthieu Barba, If Barnes +93 more

Ensembl Genomes 2022: an expanding genome resource for non-vertebrates

Nucleic Acids Research(2021)10.1093/nar/gkab1007
Top 4%
5.2DataRank
Top 4%452 citations

James E. Allen, Ridwan Amode, Andrey G Azov, Matthieu Barba, Andrés Becerra +60 more

De novo assembly, annotation, and comparative analysis of 26 diverse maize genomes

Science(2021)10.1126/science.abg5289
Top 5%
4.7DataRank
Top 5%747 citations

Arun S. Seetharam, Margaret Woodhouse, Kapeel Chougule, Shujun Ou, Jianing Liu +41 more

Gramene 2021: harnessing the power of comparative genomics and pathways for plant research

Nucleic Acids Research(2020)10.1093/nar/gkaa979
Top 8%
2.6DataRank
Top 8%133 citations

Sushma Naithani, Parul Gupta, Andrew Olson, Sharon Wei, Justin Preece +24 more

Pan-genome inversion index reveals evolutionary insights into the subpopulation structure of Asian rice

Nature Communications(2023)10.1038/s41467-023-37004-y
Top 10%
2.1DataRank
Top 10%86 citations

Zhichao Yu, Dmytro Chebotarov, Kapeel Chougule, Zhenyuan Lu, Luis F. Rivera +20 more

SorghumBase: a web-based portal for sorghum genetic information and community advancement

Planta(2022)10.1007/s00425-022-03821-6
Top 18%
1.1DataRank
Top 18%54 citations

Andrew Olson, Sharon Wei, Kapeel Chougule, Zhenyuan Lu, Marcela K Tello-Ruiz +15 more

Gapless assembly of complete human and plant chromosomes using only nanopore sequencing

Genome Research(2024)10.1101/gr.279334.124
N/A
0.966DataRank · unranked
34 citations

Zhigui Bao, Andrea Guarracino, Shujun Ou, Sara Goodwin, Katharine M. Jenike +22 more

Highly accurate long-read HiFi sequencing data for five complex genomes

Scientific Data(2020)10.1038/s41597-020-00743-4
N/A
0.885DataRank · unranked
363 citations

Kristin Mars, Greg Young, Yu‐Chih Tsai, Joseph W. Karalius, Jane M. Landolin +10 more

Plant Ontology (PO): a controlled vocabulary of plant structures and growth stages

Comparative and Functional Genomics(2005)10.1002/cfg.496
Top 26%
0.774DataRank
Top 26%173 citations

Shulamit Avraham, Katica Ilic, Elizabeth A Kellogg, Susan McCouch, Anuradha Pujar +10 more

Highly accurate long-read HiFi sequencing data for five complex genomes

10.1101/2020.05.04.077180
N/A
0.584DataRank · unranked
48 citations

Kristin Mars, Greg Young, Yu‐Chih Tsai, Joseph W. Karalius, Jane M. Landolin +10 more

Era of gapless plant genomes: innovations in sequencing and mapping technologies revolutionize genomics and breeding

Current Opinion in Biotechnology(2023)10.1016/j.copbio.2022.102886
N/A
0.581DataRank · unranked
47 citations

Sara Goodwin, Kapeel Chougule, W. Richard McCombie, Doreen Ware, Nicholas Gladman

MaizeCODE reveals bi-directionally expressed enhancers that harbor molecular signatures of maize domestication

Nature Communications(2024)10.1038/s41467-024-55195-w
N/A
0.557DataRank · unranked
15 citations

Michael Regulski, Jason Lynn, Evan Ernst, Cristiane de Santis Alves, Srividya Ramakrishnan +17 more

Gapless assembly of complete human and plant chromosomes using only nanopore sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.15.585294
N/A
0.457DataRank · unranked
20 citations

Zhigui Bao, Andrea Guarracino, Shujun Ou, Sara Goodwin, Katharine M. Jenike +18 more

Gramene 2025: expanded comparative genomics and pathway resources, integrated search, and pan-genome portals for crop research

Nucleic Acids Research(2025)10.1093/nar/gkaf1260
Top 57%
0.283DataRank
Top 57%5 citations

Sunita Kumari, Xuehong Wei, Kapeel Chougule, Zhenyuan Lu, Marcela K Tello-Ruiz +26 more

High-quality chromosome scale genome assemblies of two important Sorghum inbred lines, Tx2783 and RTx436

NAR Genomics and Bioinformatics(2024)10.1093/nargab/lqae097
Top 60%
0.253DataRank
Top 60%4 citations

Kapeel Chougule, Yinping Jiao, Andrew Olson, Vivek Kumar, Nicholas Gladman +15 more

The PanOryza pangene catalog of Asian cultivated rice

Genome Research(2025)10.1101/gr.280790.125
Top 78%
0.104DataRank
Top 78%1 citations

Eshan Sharma, Shradha Saraf, Guy Naamati, Parul Gupta, Justin Elser +24 more

MaizeCODE reveals bi-directionally expressed enhancers that harbor molecular signatures of maize domestication

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.22.581585
N/A
0DataRank · unranked
5 citations

Michael Regulski, Jason Lynn, Evan Ernst, Cristiane de Santis Alves, Srividya Ramakrishnan +15 more

Genome sequence assembly and annotation of MATA and MATB strains of Yarrowia lipolytica

NAR Genomics and Bioinformatics(2025)10.1093/nargab/lqaf175
N/A
0DataRank · unranked
0 citations

Osama E. Demerdash, Kapeel Chougule, Zhenyuan Lu, Doreen Ware, Bruce Stillman +1 more

Role of a ZF-HD Transcription Factor in miR157-Mediated Feed-Forward Regulatory Module That Determines Plant Architecture in Arabidopsis

International Journal of Molecular Sciences(2022)10.3390/ijms23158665
N/A
0DataRank · unranked
20 citations

Sunita Kumari, Andrew Olson, Felix Hauser, Doreen Ware, Young Koung Lee

Single-cell RNA sequencing of developing maize ears facilitates functional analysis and trait candidate gene discovery

Developmental Cell(2021)10.1016/j.devcel.2020.12.015
N/A
0DataRank · unranked
274 citations

Megan Crow, Brian R. Rice, Forrest Li, Benjamin Harris, Lei Liu +17 more