🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Ziqi Zhang

Jiangnan University

ORCID: 0000-0002-8198-0260

Also affiliated with Nanjing Agricultural University, Georgia Institute of Technology, Yanbian University, Sichuan University, Shaoguan University, Nanjing University of Science and Technology, Nanjing University

Biochemistry, Genetics and Molecular BiologyMedicineImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

0in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 12 papers. Top paper: “scDART: integrating unmatched scRNA-seq and scATAC-seq data and learning cross-modality relationship simultaneously”.

scDART: integrating unmatched scRNA-seq and scATAC-seq data and learning cross-modality relationship simultaneously

Genome biology(2022)10.1186/s13059-022-02706-x
N/A
0.673DataRank · unranked
88 citations

Chengkai Yang, Xiuwei Zhang, Ziqi Zhang

Autophagy and cell wall integrity pathways coordinately regulate the development and pathogenicity through MoAtg4 phosphorylation in Magnaporthe oryzae

PLoS Pathogens(2024)10.1371/journal.ppat.1011988
N/A
0.360DataRank · unranked
10 citations

Yurong Wang, Jiayun Xu, Zhixiang Yang, Ziqi Zhang, Jingyi Qian +11 more

scMultiSim: simulation of multi-modality single cell data guided by cell-cell interactions and gene regulatory networks

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.15.512320
N/A
0DataRank · unranked
11 citations

Ziqi Zhang, Michael Squires, Xi Chen, Xiuwei Zhang, Hechen Li

scMoMaT jointly performs single cell mosaic integration and multi-modal bio-marker detection

Nature Communications(2023)10.1038/s41467-023-36066-2
N/A
0DataRank · unranked
67 citations

Haoran Sun, Ragunathan Mariappan, Xi Chen, Xinyu Chen, Mika Sarkin Jain +5 more

scMultiSim: simulation of multi-modality single cell data guided by cell-cell interactions and gene regulatory networks

Research Square(2023)10.21203/rs.3.rs-2675530/v1
N/A
0DataRank · unranked
12 citations

Ziqi Zhang, Michael Squires, Xi Chen, Xiuwei Zhang, Hechen Li

scMultiSim: simulation of single cell multi-omics and spatial data guided by gene regulatory networks and cell-cell interactions

Research Square(2023)10.21203/rs.3.rs-3301625/v1
N/A
0DataRank · unranked
6 citations

Hechen Li, Ziqi Zhang, Michael Squires, Xi Chen, Xiuwei Zhang

scDisInFact: disentangled learning for integration and prediction of multi-batch multi-condition single-cell RNA-sequencing data

Nature Communications(2024)10.1038/s41467-024-45227-w
N/A
0DataRank · unranked
33 citations

Xinye Zhao, Mehak Bindra, Peng Qiu, Xiuwei Zhang, Ziqi Zhang

MoMkk1 and MoAtg1 dichotomously regulating autophagy and pathogenicity through MoAtg9 phosphorylation in Magnaporthe oryzae

mBio(2024)10.1128/mbio.03344-23
N/A
0DataRank · unranked
9 citations

Pusheng Guo, Jiayun Xu, Jiaxu Li, Miao Wu, Ziqi Zhang +8 more

Molecular mechanism of contactin 2 homophilic interaction

Structure(2024)10.1016/j.str.2024.06.004
N/A
0DataRank · unranked
8 citations

Jianfang Liu, Nicolas Chofflet, Aaron O. Bailey, William K. Russell, Ziqi Zhang +4 more

Maximum likelihood reconstruction of ancestral networks by integer linear programming

Bioinformatics(2020)10.1093/bioinformatics/btaa931
N/A
0DataRank · unranked
2 citations

Ziqi Zhang, Carl Kingsford, Xiuwei Zhang, Vaibhav Rajan

Phenazine biosynthesis protein MoPhzF regulates appressorium formation and host infection through canonical metabolic and noncanonical signaling function in Magnaporthe oryzae

New Phytologist(2024)10.1111/nph.19569
N/A
0DataRank · unranked
3 citations

Jiayun Xu, Miao Wu, Ruiming Zhang, Zhao Hu, Chang‐an Ji +14 more

Integrating unmatched scRNA-seq and scATAC-seq data and learning cross-modality relationship simultaneously

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.16.440230
N/A
0DataRank · unranked
4 citations

Chengkai Yang, Xiuwei Zhang, Ziqi Zhang