Zihuai He

Also affiliated with Stanford University

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 44 papers. Top paper: “Second-order group knockoffs with applications to genome-wide association studies”.

Second-order group knockoffs with applications to genome-wide association studies

Bioinformatics(2024)10.1093/bioinformatics/btae580

N/A

0.330DataRank · unranked

7 citations

Jiaqi Gu, Zhaomeng Chen, Tim Morrison, Emmanuel J. Candès, Zihuai He +2 more

Multitrait genetic-phenotype associations to connect disease variants and biological mechanisms

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.26.172999

N/A

0DataRank · unranked

6 citations

Vincent Laville, Zachary R. McCaw, Zihuai He, Vincent Guillemot, Carla Lasry +11 more

An evolutionarily acquired microRNA shapes development of mammalian cortical projections

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.08.286955

N/A

0DataRank · unranked

3 citations

Verl Siththanandan, Victoria Lu, Nicole Gonzalez-Nava, Lincoln W. Pasquina, Jessica L. MacDonald +10 more

Identification of putative causal loci in whole-genome sequencing data via knockoff statistics

Nature Communications(2021)10.1038/s41467-021-22889-4

N/A

0DataRank · unranked

42 citations

Linxi Liu, Chen Wang, Yann Le Guen, Justin Lee, Stephanie M. Gogarten +8 more

Multitrait GWAS to connect disease variants and biological mechanisms

PLoS Genetics(2021)10.1371/journal.pgen.1009713

N/A

0DataRank · unranked

38 citations

Vincent Laville, Zachary R. McCaw, Zihuai He, Vincent Guillemot, Carla Lasry +12 more

A novel age-informed approach for genetic association analysis in Alzheimer’s disease

Alzheimer s Research & Therapy(2021)10.1186/s13195-021-00808-5

N/A

0DataRank · unranked

39 citations

Yann Le Guen, Michaël E. Belloy, Valerio Napolioni, Sarah J. Eger, Gabriel Kennedy +4 more

Treatment Practices and Outcomes in Continuous Spike and Wave during Slow Wave Sleep: A Multicenter Collaboration

The Journal of Pediatrics(2021)10.1016/j.jpeds.2021.01.032

N/A

0DataRank · unranked

34 citations

Nancy McNamara, Anthony L. Fine, Elia Pestana‐Knight, Renée A. Shellhaas, Zihuai He +9 more

Genome-wide analysis of common and rare variants via multiple knockoffs at biobank scale, with an application to Alzheimer disease genetics

The American Journal of Human Genetics(2021)10.1016/j.ajhg.2021.10.009

N/A

0DataRank · unranked

30 citations

Yann Le Guen, Linxi Liu, Justin Lee, Shiyang Ma, Andrew C. Yang +13 more

KL∗VS heterozygosity reduces brain amyloid in asymptomatic at-risk APOE∗4 carriers

Neurobiology of Aging(2021)10.1016/j.neurobiolaging.2021.01.008

N/A

0DataRank · unranked

21 citations

Sarah J. Eger, Yann Le Guen, Valerio Napolioni, Kacie Deters, Hyun‐Sik Yang +13 more

Powerful gene-based testing by integrating long-range chromatin interactions and knockoff genotypes

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2105191118

N/A

0DataRank · unranked

20 citations

James Dalgleish, Justin Lee, Chen Wang, Linxi Liu, Richard Gill +8 more

Quantitative disease risk scores from EHR with applications to clinical risk stratification and genetic studies

npj Digital Medicine(2021)10.1038/s41746-021-00488-3

N/A

0DataRank · unranked

17 citations

Chen Wang, Atlas Khan, Ning Shang, Zihuai He, Allan Gordon +9 more

Advances and challenges in quantitative delineation of the genetic architecture of complex traits

Quantitative Biology(2021)10.15302/j-qb-021-0249

N/A

0DataRank · unranked

10 citations

Zihuai He, Hua Tang

Multiple Causal Variants Underlie Genetic Associations in Humans

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.24.445471

N/A

0DataRank · unranked

12 citations

Marianne K. DeGorter, Michael J. Gloudemans, Emily Greenwald, Kevin S. Smith, Zihuai He +2 more

A novel age-informed approach for genetic association analysis in Alzheimer’s disease

medRxiv(2021)10.1101/2021.01.05.21249292

N/A

0DataRank · unranked

4 citations

Michaël E. Belloy, Valerio Napolioni, Sarah J. Eger, Gabriel Kennedy, Ran Tao +4 more

Identification of putative causal loci in whole-genome sequencing data via knockoff statistics

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.08.434451

N/A

0DataRank · unranked

4 citations

Linxi Liu, Chen Wang, Yann Le Guen, Justin Lee, Stephanie M. Gogarten +8 more

Powerful gene-based testing by integrating long-range chromatin interactions and knockoff genotypes

medRxiv(2021)10.1101/2021.07.14.21260405

N/A

0DataRank · unranked

4 citations

James Dalgleish, Justin Lee, Chen Wang, Linxi Liu, Richard Gill +8 more

A fast and robust strategy to remove variant level artifacts in Alzheimer’s Disease Sequencing Project data

medRxiv(2021)10.1101/2021.10.28.21265577

N/A

0DataRank · unranked

2 citations

Yann Le Guen, Sarah J. Eger, Valerio Napolioni, Michael D. Greicius, Zihuai He +1 more

Challenges at the APOE locus: A robust quality control approach for accurate APOE genotyping

medRxiv(2021)10.1101/2021.10.19.21265022

N/A

0DataRank · unranked

2 citations

Sarah J. Eger, Yann Le Guen, Vincent Damotte, Shahzad Ahmad, M Arfan Ikram +24 more

Summary statistics knockoff inference empowers identification of putative causal variants in genome-wide association studies

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.06.471440

N/A

0DataRank · unranked

2 citations

Linxi Liu, Michaël E. Belloy, Yann Le Guen, Aaron Sossin, Xiaoxia Liu +9 more

Multiple causal variants underlie genetic associations in humans

Science(2022)10.1126/science.abj5117

N/A

0DataRank · unranked

208 citations

Marianne K. DeGorter, Michael J. Gloudemans, Emily Greenwald, Kevin S. Smith, Zihuai He +2 more

Association of Rare APOE Missense Variants V236E and R251G With Risk of Alzheimer Disease

JAMA Neurology(2022)10.1001/jamaneurol.2022.1166

N/A

0DataRank · unranked

93 citations

Michaël E. Belloy, Benjamin Grenier‐Boley, Itziar de Rojas, Atahualpa Castillo-Morales, Iris E. Jansen +95 more

GhostKnockoff inference empowers identification of putative causal variants in genome-wide association studies

Nature Communications(2022)10.1038/s41467-022-34932-z

N/A

0DataRank · unranked

29 citations

Linxi Liu, Michaël E. Belloy, Yann Le Guen, Aaron Sossin, Xiaoxia Liu +10 more

Challenges at the APOE locus: a robust quality control approach for accurate APOE genotyping

Alzheimer s Research & Therapy(2022)10.1186/s13195-022-00962-4

N/A

0DataRank · unranked

21 citations

Sarah J. Eger, Yann Le Guen, Vincent Damotte, Shahzad Ahmad, M Arfan Ikram +24 more

Deep neural networks with controlled variable selection for the identification of putative causal genetic variants

Nature Machine Intelligence(2022)10.1038/s42256-022-00525-0

N/A

0DataRank · unranked

18 citations

Fred Lu, Yann Le Guen, Michaël E. Belloy, Zihuai He, Peyman Hosseinzadeh Kassani

Connectivity increases during spikes and spike-free periods in self-limited epilepsy with centrotemporal spikes

Clinical Neurophysiology(2022)10.1016/j.clinph.2022.09.015

N/A

0DataRank · unranked

14 citations

Christopher Lee‐Messer, Zihuai He, Brenda E. Porter, Fiona M. Baumer, Beatrice S. Goad

KnockoffTrio: A knockoff framework for the identification of putative causal variants in genome-wide association studies with trio design

The American Journal of Human Genetics(2022)10.1016/j.ajhg.2022.08.013

N/A

0DataRank · unranked

13 citations

Chen Wang, Linxi Liu, Joseph D. Buxbaum, Zihuai He, Iuliana Ionita‐Laza +1 more

Deep learning-assisted genome-wide characterization of massively parallel reporter assays

Nucleic Acids Research(2022)10.1093/nar/gkac990

N/A

0DataRank · unranked

5 citations

Aaron Sossin, Nathan S. Abell, Stephen B. Montgomery, Zihuai He, Fred Lu

Improving genetic risk prediction across diverse population by disentangling ancestry representations

Research Square(2022)10.21203/rs.3.rs-1829520/v1

N/A

0DataRank · unranked

4 citations

Yann Le Guen, Xiaoxia Liu, Hua Tang, James Zou, Zihuai He +1 more

Organ aging signatures in the plasma proteome track health and disease

Nature(2023)10.1038/s41586-023-06802-1

N/A

0DataRank · unranked

586 citations

Jarod Rutledge, Daniel Nachun, Róbert Pálovics, Olamide Abiose, Patricia Moran‐Losada +31 more

Loop diuretics association with Alzheimer’s disease risk

Frontiers in Aging(2023)10.3389/fragi.2023.1211571

N/A

0DataRank · unranked

11 citations

Justin Lee, Kyan Younes, Michael D. Greicius, Yann Le Guen, Zihuai He +1 more

Improving genetic risk prediction across diverse population by disentangling ancestry representations

Communications Biology(2023)10.1038/s42003-023-05352-6

N/A

0DataRank · unranked

18 citations

Yann Le Guen, Xiaoxia Liu, Michaël E. Belloy, Hua Tang, James Zou +2 more

Major Adverse Dystrophinopathy Events (MADE) score as marker of cumulative morbidity and risk for mortality in boys with Duchenne muscular dystrophy

Progress in Pediatric Cardiology(2023)10.1016/j.ppedcard.2023.101639

N/A

0DataRank · unranked

5 citations

Ariadna Garcia, Zihuai He, Carolina Tesi Rocha, MyMy C. Buu, David N. Rosenthal +4 more

Temporal tau asymmetry spectrum influences divergent behavior and language patterns in Alzheimer’s disease

medRxiv(2023)10.1101/2023.11.10.23296836

N/A

0DataRank · unranked

3 citations

Viktorija Smith, Emily Johns, Mackenzie Carlson, Joseph R. Winer, Zihuai He +6 more

Bumetanide Exposure Association with Alzheimer’s Disease Risk

Research Square(2023)10.21203/rs.3.rs-2574215/v1

N/A

0DataRank · unranked

2 citations

Justin Lee, Kyan Younes, Michael D. Greicius, Yann Le Guen, Zihuai He +1 more

Summary Statistics Knockoffs Inference with Family-wise Error Rate Control

arXiv (Cornell University)(2023)10.48550/arxiv.2310.09493

N/A

0DataRank · unranked

0 citations

Jiaqi Gu, Zhaomeng Chen, Zihuai He, Catherine Xinrui Yu

Temporal tau asymmetry spectrum influences divergent behavior and language patterns in Alzheimer‘s disease

Brain Behavior and Immunity(2024)10.1016/j.bbi.2024.05.002

N/A

0DataRank · unranked

13 citations

Viktorija Smith, Emily Johns, Mackenzie Carlson, Joseph R. Winer, Zihuai He +5 more

Summary statistics knockoffs inference with family-wise error rate control

Biometrics(2024)10.1093/biomtc/ujae082

N/A

0DataRank · unranked

2 citations

Jiaqi Gu, Zhaomeng Chen, Zihuai He, Catherine Xinrui Yu

Age-associated proteins explain the role of medial temporal lobe networks in Alzheimer’s disease

GeroScience(2024)10.1007/s11357-024-01291-0

N/A

0DataRank · unranked

1 citations

Yejin Kim, Kai Zhang, Xiaoqian Jiang, Zihuai He, Victor W. Henderson +2 more

Controlled Variable Selection from Summary Statistics Only? A Solution via GhostKnockoffs and Penalized Regression

PubMed(2024)10.48550/arxiv.2402.12724

N/A

0DataRank · unranked

5 citations

Zihuai He, Benjamin B. Chu, Jiaqi Gu, Tim Morrison, Chiara Sabatti +2 more

Beyond guilty by association at scale: searching for causal variants on the basis of genome-wide summary statistics

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.28.582621

N/A

0DataRank · unranked

5 citations

Benjamin B. Chu, James Yang, Jiaqi Gu, Zhaomeng Chen, Linxi Liu +12 more

ScAtt: an Attention based architecture to analyze Alzheimer's disease at cell type level from single-cell RNA-sequencing data

arXiv (Cornell University)(2024)10.48550/arxiv.2405.17433

N/A

0DataRank · unranked

2 citations

Robert R. Butler, Prashnna Gyawali, Frank M. Longo, Zihuai He, Xiaoxia Liu

Robust inference with GhostKnockoffs in genome-wide association studies

Research Square(2025)10.21203/rs.3.rs-6396196/v1

N/A

0DataRank · unranked

0 citations

Xinran Qi, Michaël E. Belloy, Jiaqi Gu, Xiaoxia Liu, Hua Tang +1 more

An evolutionarily acquired microRNA shapes development of mammalian cortical projections

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2006700117

N/A

0DataRank · unranked

33 citations

Verl Siththanandan, Victoria Lu, Nicole Gonzalez-Nava, Lincoln W. Pasquina, Jessica L. MacDonald +10 more

Uncovering Heterogeneous Effects via Localized Feature Selection

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.06.03.657761

N/A

0DataRank · unranked

0 citations

Jiaqi Gu, Zhaomeng Chen, Benjamin B. Chu, Linxi Liu, Tim Morrison +10 more