🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Shuichi Onami

RIKEN

ORCID: 0000-0002-8255-1724

Also affiliated with RIKEN Center for Biosystems Dynamics Research, RIKEN Center for Integrative Medical Sciences, Data Management (Italy), Quantitative Biology Center, The University of Osaka

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile
0.652Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Unifying community-wide whole-brain imaging datasets enables robust automated neuron identification and reveals determinants of neuron positioning in C. elegans

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.28.591397
Top 58%
0.268DataRank
Top 58%4 citations

Kevin Rusch, Raymond L. Dunn, Jackson Borchardt, Steven Ban, Greg Bubnis +14 more

Papers

Driven by 13 papers — median percentile 37. Top paper: “OME-Zarr: a cloud-optimized bioimaging file format with international community support”.

OME-Zarr: a cloud-optimized bioimaging file format with international community support

Histochemistry and Cell Biology(2023)10.1007/s00418-023-02209-1
N/A
2.8DataRank · unranked
123 citations

Daniela Basurto-Lozada, Sébastien Besson, John Bogovic, Jordão Bragantini, Eva Maxfield Brown +64 more

Enabling Global Image Data Sharing in the Life Sciences

arXiv (Cornell University)(2024)10.48550/arxiv.2401.13023
N/A
0.282DataRank · unranked
5 citations

Sreenivas Bhattiprolu, Boerner, Katy, Beth A. Cimini, Lucy Collinson, Jan Ellenberg +18 more

Unifying community-wide whole-brain imaging datasets enables robust automated neuron identification and reveals determinants of neuron positioning in C. elegans

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.28.591397
Top 58%
0.268DataRank
Top 58%4 citations

Kevin Rusch, Raymond L. Dunn, Jackson Borchardt, Steven Ban, Greg Bubnis +14 more

Unifying community whole-brain imaging datasets enables robust neuron identification and reveals determinants of neuron position in C. elegans

Cell Reports Methods(2025)10.1016/j.crmeth.2024.100964
Top 63%
0.219DataRank
Top 63%3 citations

Kevin Rusch, Raymond L. Dunn, Jackson Borchardt, Steven Ban, Greg Bubnis +14 more

Deep Collection of Quantitative Nuclear Division Dynamics Data in RNAi-treated Caenorhabditis elegans Embryos

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.04.325761
Top 70%
0.165DataRank
Top 70%2 citations

Hatsumi Okada, Hiroya Itoga, Shuichi Onami, Koji Kyoda

The PAF1 complex cell-autonomously promotes oogenesis in Caenorhabditis elegans

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.18.456829
N/A
0DataRank · unranked
0 citations

Natsumi Ota, Hisashi Takatsuka, Takuma Unno, Shuichi Onami, Asako Sugimoto +2 more

The PAF1 complex cell autonomously promotes oogenesis in Caenorhabditis elegans

Genes to Cells(2022)10.1111/gtc.12938
N/A
0DataRank · unranked
6 citations

Natsumi Ota, Hisashi Takatsuka, Takuma Unno, Shuichi Onami, Asako Sugimoto +2 more

The transsulfuration pathway suppresses the embryonic lethal phenotype of glutathione reductase mutants in Caenorhabditis elegans

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.09.632117
N/A
0DataRank · unranked
0 citations

David Guerrero‐Gómez, Eva Gómez‐Orte, Qing Cheng, Angelina Zheleva, José Antonio Mora-Lorca +10 more

The transsulfuration pathway suppresses the embryonic lethal phenotype of glutathione reductase mutants in Caenorhabditis elegans

G3 Genes Genomes Genetics(2025)10.1093/g3journal/jkaf102
N/A
0DataRank · unranked
0 citations

Eva Gómez‐Orte, David Guerrero‐Gómez, Qing Cheng, Angelina Zheleva, José Antonio Mora-Lorca +13 more

Statistical image processing quantifies the changes in cytoplasmic texture associated with aging in Caenorhabditis elegans oocytes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.30.228270
N/A
0DataRank · unranked
0 citations

Jun Takayama, Hatsumi Okada, Shuichi Onami, Momoko Imakubo

REMBI: Recommended Metadata for Biological Images—enabling reuse of microscopy data in biology

Nature Methods(2021)10.1038/s41592-021-01166-8
N/A
0DataRank · unranked
130 citations

Wah Chiu, Lucy Collinson, Michele C. Darrow, Jan Ellenberg, David Grünwald +41 more

A global view of standards for open image data formats and repositories

Nature Methods(2021)10.1038/s41592-021-01113-7
N/A
0DataRank · unranked
10 citations

Pasi Kankaanpää, Uğis Sarkans, Wojtek Goscinski, Graham J. Galloway, Leonel Malacrida +12 more

Statistical image processing quantifies the changes in cytoplasmic texture associated with aging in Caenorhabditis elegans oocytes

BMC Bioinformatics(2021)10.1186/s12859-021-03990-3
N/A
0DataRank · unranked
12 citations

Jun Takayama, Hatsumi Okada, Shuichi Onami, Momoko Imakubo