Jonathan C. Trinidad

Also affiliated with Indiana University Bloomington, Indiana University

ChemistryBiochemistry, Genetics and Molecular BiologyNeuroscience

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 22 papers. Top paper: “Assembly of a dsRNA synthesizing complex: RNA-DEPENDENT RNA POLYMERASE 2 contacts the largest subunit of NUCLEAR RNA POLYMERASE IV”.

Assembly of a dsRNA synthesizing complex: RNA-DEPENDENT RNA POLYMERASE 2 contacts the largest subunit of NUCLEAR RNA POLYMERASE IV

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2019276118

N/A

0.477DataRank · unranked

23 citations

Jasleen Singh, Feng Wang, Yixiang Zhang, Akihito Fukudome, Jonathan C. Trinidad +3 more

Sex-specific endocrine regulation of seasonal aggression in Siberian hamsters

Proceedings of the Royal Society B Biological Sciences(2022)10.1098/rspb.2022.0668

N/A

0.371DataRank · unranked

8 citations

Jonathan C. Trinidad, Gregory E. Demas, Kathleen M. Munley

Osteocyte-Derived CaMKK2 Regulates Osteoclasts and Bone Mass in a Sex-Dependent Manner Through Secreted Calpastatin

Preprints.org(2023)10.20944/preprints202302.0002.v1

N/A

0.104DataRank · unranked

1 citations

Mavis Irwin, Yong Li, Anuradha Valiyakambrath, Brett T Mattingly, Sheel Patel +13 more

Impaired phosphatidylethanolamine metabolism activates a reversible stress response that detects and resolves mutant mitochondrial precursors

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.10.416495

N/A

0DataRank · unranked

0 citations

Elizabeth Calzada, Michelle Grace Acoba, Tian Zhao, Yasunori Watanabe, Anahita Nejatfard +5 more

Impaired phosphatidylethanolamine metabolism activates a reversible stress response that detects and resolves mutant mitochondrial precursors

iScience(2021)10.1016/j.isci.2021.102196

N/A

0DataRank · unranked

24 citations

Elizabeth Calzada, Michelle Grace Acoba, Tian Zhao, Yasunori Watanabe, Anahita Nejatfard +5 more

The BORDER family of negative transcription elongation factors regulates flowering time in Arabidopsis

Current Biology(2021)10.1016/j.cub.2021.09.074

N/A

0DataRank · unranked

15 citations

Pascal G. P. Martin, Yixiang Zhang, Jonathan C. Trinidad, Feifei Xu, Jie Huang +7 more

A graphical representation of glycan heterogeneity

Glycobiology(2021)10.1093/glycob/cwab116

N/A

0DataRank · unranked

5 citations

Miloš V. Novotný, David E. Clemmer, Jonathan C. Trinidad, Xuyao Zeng

Deciphering the mechanism of processive ssDNA digestion by the Dna2-RPA ensemble

Nature Communications(2022)10.1038/s41467-021-27940-y

N/A

0DataRank · unranked

17 citations

Yiling Zhao, Nhung Pham, Yuxi Li, Yixiang Zhang, Jonathan C. Trinidad +4 more

Metabolic and Structural Insights into Hydrogen Sulfide Mis-Regulation in Enterococcus faecalis

Antioxidants(2022)10.3390/antiox11081607

N/A

0DataRank · unranked

11 citations

Sofia Soares Costa, Katherine A. Edmonds, Jonathan C. Trinidad, Federico M. Issoglio, José A. Brito +2 more

A method for selective 19 F ‐labeling absent of probe sequestration ( SLAPS )

Protein Science(2022)10.1002/pro.4454

N/A

0DataRank · unranked

3 citations

Scott A. Robson, Jonathan C. Trinidad, Joshua J. Ziarek, Austin D. Dixon

A Method for Selective 19 F-Labeling Absent of Probe Sequestration (SLAPS)

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.17.496653

N/A

0DataRank · unranked

0 citations

Jonathan C. Trinidad, Joshua J. Ziarek, Austin D. Dixon

Nanoscopic and functional characterization of keratinocyte-originating exosomes in the wound fluid of non-diabetic and diabetic chronic wound patients

Nano Today(2023)10.1016/j.nantod.2023.101954

N/A

0DataRank · unranked

34 citations

Anu Sharma, Adam Anthony, Mohamed S. El Masry, Andrew D. Couse, Piya Das Ghatak +8 more

An identification method to distinguish monomeric sugar isomers on glycopeptides

The Analyst(2023)10.1039/d3an01036h

N/A

0DataRank · unranked

4 citations

Jonathan C. Trinidad, Nicola L. B. Pohl, Ashley E. DeYong

Osteocyte-Derived CaMKK2 Regulates Osteoclasts and Bone Mass in a Sex-Dependent Manner through Secreted Calpastatin

International Journal of Molecular Sciences(2023)10.3390/ijms24054718

N/A

0DataRank · unranked

6 citations

Mavis Irwin, Yong Li, Anuradha Valiya Kambrath, Brett T. Mattingly, Sheel Patel +13 more

EZH2 directly methylates PARP1 and regulates its activity in cancer

Science Advances(2024)10.1126/sciadv.adl2804

N/A

0DataRank · unranked

16 citations

Jiangchuan Shen, Yanan Ren, Qi Liu, Rui Wang, Qiaqia Li +18 more

Delineating Bovine Milk Derived Microvesicles from Exosomes Using Proteomics

Journal of Proteome Research(2024)10.1021/acs.jproteome.4c00352

N/A

0DataRank · unranked

7 citations

Sarah J. Cox‐Vázquez, Subhadip Ghatak, Jonathan C. Trinidad, David E. Clemmer, Andrew D. Couse

Multiple mechanisms of action of an extremely painful venom

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.12.612741

N/A

0DataRank · unranked

0 citations

Luana C. de Assis Ferreira, Jonathan C. Trinidad, Sunčica Šašić, Andrea G. Hohmann, W. Daniel Tracey +1 more

Multiple mechanisms of action for an extremely painful venom

Current Biology(2025)10.1016/j.cub.2024.11.070

N/A

0DataRank · unranked

5 citations

Luana C. de Assis Ferreira, Jonathan C. Trinidad, Sunčica Šašić, Andrea G. Hohmann, W. Daniel Tracey +1 more

The Response of Acinetobacter baumannii to Hydrogen Sulfide Reveals Two Independent Persulfide-Sensing Systems and a Connection to Biofilm Regulation

mBio(2020)10.1128/mbio.01254-20

N/A

0DataRank · unranked

54 citations

Jiefei Wang, Katherine A. Edmonds, Lauren D. Palmer, Yixiang Zhang, Jonathan C. Trinidad +3 more

Exploring metalloproteome remodeling in calprotectin-stressed Acinetobacter baumannii using chemoproteomics

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.16.676631

N/A

0DataRank · unranked

0 citations

Daniel W. Bak, Claudia Andreini, Jeanette M. Miller, Jonathan C. Trinidad, Peter V. Cornish +6 more

Comparative Proteomics Reveal Me31B’s Interactome Dynamics, Expression Regulation, and Assembly Mechanism into Germ Granules during Drosophila Germline Development

Scientific Reports(2020)10.1038/s41598-020-57492-y

N/A

0DataRank · unranked

29 citations

Dhruv Solanki, Nicholas Olchawa, Neal Govani, Jonathan C. Trinidad, Ming Gao +1 more

Assembly of a double-stranded RNA synthesizing complex: RNA-DEPENDENT RNA POLYMERASE 2 docks with NUCLEAR RNA POLYMERASE IV at the clamp domain

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.09.290171

N/A

0DataRank · unranked

0 citations

Jasleen Singh, Akihito Fukudome, Feng Wang, Yixiang Zhang, Yuichiro Takagi +3 more