Ginger Metcalf

Baylor College of Medicine

Biochemistry, Genetics and Molecular BiologyMedicineAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

11.8Author DataRank

Indexed papers

5in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Genomic data in the All of Us Research Program

Nature(2024)10.1038/s41586-023-06957-x

Top 2%

8.6DataRank

Top 2%772 citations

Alexander G. Bick, Ginger Metcalf, Kelsey Mayo, Lee Lichtenstein, Shimon Rura +91 more

Papers

Driven by 42 papers — median percentile 73. Top paper: “Genomic data in the All of Us Research Program”.

Genomic data in the All of Us Research Program

Nature(2024)10.1038/s41586-023-06957-x

Top 2%

8.6DataRank

Top 2%772 citations

Alexander G. Bick, Ginger Metcalf, Kelsey Mayo, Lee Lichtenstein, Shimon Rura +91 more

Oligonucleotide capture sequencing of the SARS-CoV-2 genome and subgenomic fragments from COVID-19 individuals

PLoS ONE(2021)10.1371/journal.pone.0244468

Top 12%

1.8DataRank

Top 12%37 citations

Sara Javornik Cregeen, Richard Sucgang, Qingchang Meng, Xiang Qin, Vasanthi Avadhanula +16 more

Temporal development of the gut microbiome in early childhood from the TEDDY study

Nature(2018)10.1038/s41586-018-0617-x

N/A

1.1DataRank · unranked

2041 citations

Nadim J. Ajami, Jacqueline L. O’Brien, Diane S. Hutchinson, Daniel P. Smith, Matthew C. Wong +28 more

Chromosome Xq23 is associated with lower atherogenic lipid concentrations and favorable cardiometabolic indices

Nature Communications(2021)10.1038/s41467-021-22339-1

N/A

1.1DataRank · unranked

51 citations

Akhil Pampana, Sarah E. Graham, Sanni Ruotsalainen, James A. Perry, Paul S. de Vries +95 more

Structural variation across 138,134 samples in the TOPMed consortium

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.25.525428

Top 27%

0.737DataRank

Top 27%18 citations

Adam C. English, Ginger Metcalf, Jianzhi Yang, Mark J. P. Chaisson, Nathan Pankratz +82 more

Whole Genome Analysis of Venous Thromboembolism: the Trans-Omics for Precision Medicine Program

Circulation Genomic and Precision Medicine(2023)10.1161/circgen.121.003532

Top 38%

0.507DataRank

Top 38%11 citations

Cecelia Laurie, Brandon J. Coombes, Deepti Jain, Matthew P. Conomos, Jennifer A. Brody +30 more

Identification of allele-specific KIV-2 repeats and impact on Lp(a) measurements for cardiovascular disease risk

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.24.538128

N/A

0.406DataRank · unranked

14 citations

Jonathan R. Belyeu, Xiao Chen, Luis F. Paulin, Ngoc Quynh Nguyen, E. Newman +21 more

Whole genome sequence analysis of pulmonary function and COPD in 44,287 multi-ancestry participants

Genome Biology(2026)10.1186/s13059-025-03921-y

Top 78%

0.104DataRank

Top 78%1 citations

Xiaowei Hu, Kangjin Kim, Sung Chun, Peter Orchard, Dandi Qiao +65 more

Whole-genome sequencing as an investigational device for return of hereditary disease risk and pharmacogenomic results as part of the All of Us Research Program

Genome Medicine(2022)10.1186/s13073-022-01031-z

N/A

0DataRank · unranked

63 citations

Donna M. Muzny, Joshua D. Smith, Kimberly Walker, Cynthia L. Neben, Christina M. Lockwood +16 more

Polygenic transcriptome risk scores for COPD and lung function improve cross-ethnic portability of prediction in the NHLBI TOPMed program

The American Journal of Human Genetics(2022)10.1016/j.ajhg.2022.03.007

N/A

0DataRank · unranked

25 citations

Dandi Qiao, Wonji Kim, Matthew Moll, Pallavi Balte, Leslie A. Lange +46 more

Whole genome sequencing identifies structural variants contributing to hematologic traits in the NHLBI TOPMed program

Nature Communications(2022)10.1038/s41467-022-35354-7

N/A

0DataRank · unranked

18 citations

Adrienne M. Stilp, Shuquan Rao, Bjarni V. Halldórsson, Doruk Beyter, Jia Wen +54 more

Whole-exome sequencing of 14 389 individuals from the ESP and CHARGE consortia identifies novel rare variation associated with hemostatic factors

Human Molecular Genetics(2022)10.1093/hmg/ddac100

N/A

0DataRank · unranked

17 citations

Peng Wei, Jennifer A. Brody, Ming‐Huei Chen, Paul S. de Vries, Jennifer E. Huffman +26 more

Whole-exome sequencing study identifies four novel gene loci associated with diabetic kidney disease

Human Molecular Genetics(2022)10.1093/hmg/ddac290

N/A

0DataRank · unranked

15 citations

Xiao Sun, Xuenan Mi, Zhijie Huang, Y.Y. Hsu, James E. Hixson +47 more

A pan-genome approach to decipher variants in the highly complex tandem repeat of LPA

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.08.495395

N/A

0DataRank · unranked

11 citations

Sairam Behera, Ginger Metcalf, Richard A. Gibbs, Eric Boerwinkle, Fritz J. Sedlazeck +1 more

Rare Genetic Variants Associated with Sudden Cardiac Arrest in the Young: A Prospective, Population-Based Study

medRxiv(2022)10.1101/2022.10.27.22281332

N/A

0DataRank · unranked

0 citations

Ninad S. Chaudhary, Kotoka Nakamura, Harpriya Chugh, Audrey Uy‐Evanado, F Faye Norby +8 more

Rare Genetic Variants Associated With Sudden Cardiac Arrest in the Young: A Prospective, Population-Based Study

Circulation Genomic and Precision Medicine(2023)10.1161/circgen.123.004105

N/A

0DataRank · unranked

5 citations

Ninad S. Chaudhary, Kotoka Nakamura, Harpriya Chugh, Audrey Uy‐Evanado, Faye L. Norby +8 more

Inter and intra-host diversity of RSV in hematopoietic stem cell transplant adults with normal and delayed viral clearance

Virus Evolution(2023)10.1093/ve/vead086

N/A

0DataRank · unranked

11 citations

Daniel Paiva Agustinho, Vipin K. Menon, Roy F. Chemaly, Dimpy P. Shah, Xiang Qin +10 more

Modeling nonsegmented negative-strand RNA virus (NNSV) transcription with ejective polymerase collisions and biased diffusion

Frontiers in Molecular Biosciences(2023)10.3389/fmolb.2022.1095193

N/A

0DataRank · unranked

2 citations

David Henke, Anubama Rajan, Donna M. Muzny, HarshaVardhan Doddapaneni, Vipin K. Menon +9 more

Structural variation across 138,134 samples in the TOPMed consortium

Research Square(2023)10.21203/rs.3.rs-2515453/v1

N/A

0DataRank · unranked

9 citations

Adam C. English, Ginger Metcalf, Jianzhi Yang, Mark J. P. Chaisson, Nathan Pankratz +82 more

Intra- and Inter-host Evolution of Human Norovirus in Healthy Adults

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.30.542907

N/A

0DataRank · unranked

5 citations

Sara J. Javornik Cregeen, Anil Surathu, Frederick H. Neill, Donna M. Muzny, HarshaVardhan Doddapaneni +11 more

Examining intra-host genetic variation of RSV by short read high-throughput sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.17.541198

N/A

0DataRank · unranked

0 citations

Felipe-Andrés Piedra, Vasanthi Avadhanula, HarshaVardhan Doddapaneni, Donna M. Muzny, Vipin K. Menon +8 more

Longitudinal host transcriptional responses to SARS-CoV-2 infection in adults with extremely high viral load

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.24.542181

N/A

0DataRank · unranked

0 citations

Chad J. Creighton, Laura Ferlic‐Stark, Richard Sucgang, Yiqun Zhang, Divya Nagaraj +12 more

Functional Genomics of Gastrointestinal Escherichia coli Isolated from Patients with Cancer and Diarrhea

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.31.543115

N/A

0DataRank · unranked

0 citations

Justin R. Clark, Lily G. Carlin, Ellen E. Vaughan, Anubama Rajan, Adilene Olvera +22 more

Longitudinal host transcriptional responses to SARS-CoV-2 infection in adults with extremely high viral load

Research Square(2023)10.21203/rs.3.rs-2978272/v1

N/A

0DataRank · unranked

0 citations

Chad J. Creighton, Laura Ferlic‐Stark, Richard Sucgang, Yiqun Zhang, Divya Nagaraj +12 more

Unveiling microbial diversity: harnessing long-read sequencing technology

Nature Methods(2024)10.1038/s41592-024-02262-1

N/A

0DataRank · unranked

101 citations

Yilei Fu, Vipin K. Menon, Ginger Metcalf, Todd J. Treangen, Fritz J. Sedlazeck +1 more

A common flanking variant is associated with enhanced stability of the FGF14-SCA27B repeat locus

Nature Genetics(2024)10.1038/s41588-024-01808-5

N/A

0DataRank · unranked

34 citations

Giulia Gobbo, Madeline Couse, Egor Dolzhenko, Sathiji Nageshwaran, Warren Cheung +95 more

Identification of allele-specific KIV-2 repeats and impact on Lp(a) measurements for cardiovascular disease risk

BMC Medical Genomics(2024)10.1186/s12920-024-02024-0

N/A

0DataRank · unranked

10 citations

Jonathan R. Belyeu, Xiao Chen, Luis F. Paulin, Ngoc Quynh Nguyen, Emma Newman +21 more

Closing the gap: Solving complex medically relevant genes at scale

medRxiv(2024)10.1101/2024.03.14.24304179

N/A

0DataRank · unranked

11 citations

John Harting, Holly Corbitt, Xiao Chen, Shalini N. Jhangiani, HarshaVardhan Doddapaneni +19 more

K-mer analysis of long-read alignment pileups for structural variant genotyping

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.22.619642

N/A

0DataRank · unranked

1 citations

Fabio Cunial, Ginger Metcalf, Richard A. Gibbs, Fritz J. Sedlazeck, Adam C. English

Polygenic transcriptome risk scores for COPD and lung function improve cross-ethnic portability of prediction in the NHLBI TOPMed program

UNC Libraries(2024)10.17615/a7t8-mf18

N/A

0DataRank · unranked

0 citations

Stephen S. Rich, Xin Hu, B.E Cade, TOPMed Lung Working Group, Shannon Dugan‐Perez +47 more

Identification of allele-specific KIV-2 repeats and impact on Lp(a) measurements for cardiovascular disease risk

UNC Libraries(2024)10.17615/0jmh-f540

N/A

0DataRank · unranked

0 citations

Michael A. Eberle, Xiao Chen, Richard A. Gibbs, Emma Newman, Massimiliano Rossi +21 more

K-mer analysis of long-read alignment pileups for structural variant genotyping

Nature Communications(2025)10.1038/s41467-025-58577-w

N/A

0DataRank · unranked

6 citations

Fabio Cunial, Ginger Metcalf, Richard A. Gibbs, Fritz J. Sedlazeck, Adam C. English

Longitudinal host transcriptional responses to SARS-CoV-2 infection in adults with extremely high viral load

PLoS ONE(2025)10.1371/journal.pone.0317033

N/A

0DataRank · unranked

0 citations

Chad J. Creighton, Laura Ferlic‐Stark, Divya Nagaraj, Yiqun Zhang, Richard Sucgang +12 more

cellSTAAR: incorporating single-cell-sequencing-based functional data to boost power in rare variant association testing of noncoding regions

Nature Methods(2025)10.1038/s41592-025-02919-5

N/A

0DataRank · unranked

0 citations

Yi Zhang, Xihao Li, Margaret Sunitha Selvaraj, Zilin Li, Hufeng Zhou +544 more

Evolutionary dynamics of Respiratory Syncytial Virus in pre-pandemic, pandemic, and post-pandemic periods in Houston, Texas, USA

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.06.668939

N/A

0DataRank · unranked

0 citations

Daniel Paiva Agustinho, Leila C. Sahni, Anil Surathu, David Henke, HarshaVardhan Doddapaneni +12 more

High-depth African genomes inform human migration and health

Nature(2020)10.1038/s41586-020-2859-7

N/A

0DataRank · unranked

370 citations

Shaun Aron, Laura R. Botigué, Dhriti Sengupta, Gerrit Botha, Taoufik Bensellak +62 more

Rare Exome Sequence Variants in CLCN6 Reduce Blood Pressure Levels and Hypertension RiskCLINICAL PERSPECTIVE

UNC Libraries(2020)10.17615/ttpw-sn86

N/A

0DataRank · unranked

0 citations

Alex P. Reiner, Donna M. Muzny, Shih‐Jen Hwang, Christopher Newton‐Cheh, Leslie J. Raffel +30 more

Whole-Exome Sequencing Identifies Loci Associated with Blood Cell Traits and Reveals a Role for Alternative GFI1B Splice Variants in Human Hematopoiesis

UNC Libraries(2020)10.17615/vn1s-8a35

N/A

0DataRank · unranked

0 citations

Frank J.A. van Rooij, Raha Pazoki, Albert Hofman, Nathan Pankratz, Richard A. Gibbs +51 more

muCNV: genotyping structural variants for population-level sequencing

Bioinformatics(2021)10.1093/bioinformatics/btab199

N/A

0DataRank · unranked

11 citations

Fritz J. Sedlazeck, Qihui Zhu, Adam C. English, Ginger Metcalf, Hyun Min Kang +4 more

Whole genome sequencing identifies common and rare structural variants contributing to hematologic traits in the NHLBI TOPMed program

medRxiv(2021)10.1101/2021.12.16.21267871

N/A

0DataRank · unranked

6 citations

Adrienne M. Stilp, Shuquan Rao, Bjarni V. Halldórsson, Doruk Beyter, Jia Wen +54 more

Truvari: refined structural variant comparison preserves allelic diversity

Genome biology(2022)10.1186/s13059-022-02840-6

N/A

0DataRank · unranked

234 citations

Vipin K. Menon, Richard A. Gibbs, Ginger Metcalf, Fritz J. Sedlazeck, Adam C. English

TOP-LD: A tool to explore linkage disequilibrium with TOPMed whole-genome sequence data

The American Journal of Human Genetics(2022)10.1016/j.ajhg.2022.04.006

N/A

0DataRank · unranked

106 citations

Jonathan D. Rosen, Quan Sun, Jiawen Chen, Marsha M. Wheeler, Ying Zhou +20 more

Ginger Metcalf

Indexed papers

Top data-sharing exemplar

Papers