Alison Ciling

Also affiliated with University of Washington, Innovative Genomics Institute, University of California, Berkeley

MedicineEnvironmental ScienceEngineeringBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 21 papers. Top paper: “Neutralizing immunity in vaccine breakthrough infections from the SARS-CoV-2 Omicron and Delta variants”.

Neutralizing immunity in vaccine breakthrough infections from the SARS-CoV-2 Omicron and Delta variants

Cell(2022)10.1016/j.cell.2022.03.019

N/A

9.1DataRank · unranked

176 citations

Abdullah M. Syed, Mary Kate Morris, Noah Brazer, Prachi Saldhi, Miguel Garcia-Knight +19 more

SARS-CoV-2 variants evolve convergent strategies to remodel the host response

Cell(2023)10.1016/j.cell.2023.08.026

N/A

2.1DataRank · unranked

113 citations

Ann-Kathrin Reuschl, Benjamin J. Polacco, Lucy G. Thorne, Manisha R. Ummadi, Chengjin Ye +88 more

Omicron mutations enhance infectivity and reduce antibody neutralization of SARS-CoV-2 virus-like particles

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2200592119

N/A

0.802DataRank · unranked

209 citations

Alison Ciling, Taha Y. Taha, Irene P. Chen, Mir M. Khalid, Bharath Sreekumar +16 more

SARS-CoV-2 evolution balances conflicting roles of N protein phosphorylation

PLoS Pathogens(2024)10.1371/journal.ppat.1012741

N/A

0.655DataRank · unranked

24 citations

Alison Ciling, Irene P. Chen, Christopher R. Carlson, Armin N. Adly, Hannah S. Martin +11 more

Assembly of SARS-CoV-2 ribonucleosomes by truncated N∗ variant of the nucleocapsid protein

Journal of Biological Chemistry(2023)10.1016/j.jbc.2023.105362

N/A

0.550DataRank · unranked

38 citations

Maxine Bi, Christopher R. Carlson, Abdullah M. Syed, Alison Ciling, Jennifer A. Doudna +3 more

Global landscape of the host response to SARS-CoV-2 variants reveals viral evolutionary trajectories

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.19.512927

N/A

0.524DataRank · unranked

14 citations

Ann‐Kathrin Reuschl, Benjamin J. Polacco, Lucy G. Thorne, Manisha R. Ummadi, Chengjin Ye +72 more

Publisher Correction: Accelerated RNA detection using tandem CRISPR nucleases

Nature Chemical Biology(2021)10.1038/s41589-021-00882-8

N/A

0DataRank · unranked

8 citations

Gavin J. Knott, Dylan C. J. Smock, John J. Desmarais, Sungmin Son, Abdul Bhuiya +43 more

Limited cross-variant immunity from SARS-CoV-2 Omicron without vaccination

Nature(2022)10.1038/s41586-022-04865-0

N/A

0DataRank · unranked

214 citations

Irene P. Chen, Tongcui Ma, Abdullah M. Syed, Noah Brazer, Prachi Saldhi +38 more

Rapid detection of SARS-CoV-2 RNA in saliva via Cas13

Nature Biomedical Engineering(2022)10.1038/s41551-022-00917-y

N/A

0DataRank · unranked

143 citations

Shreeya Agrawal, Alison Fanton, Aditya R. Jangid, Bérénice Charrez, Arturo M. Escajeda +44 more

Limited Cross-Variant Immunity after Infection with the SARS-CoV-2 Omicron Variant Without Vaccination

medRxiv(2022)10.1101/2022.01.13.22269243

N/A

0DataRank · unranked

35 citations

Irene P. Chen, Tongcui Ma, Abdullah M. Syed, Noah Brazer, Prachi Saldhi +33 more

Neutralizing immunity in vaccine breakthrough infections from the SARS-CoV-2 Omicron and Delta variants

medRxiv(2022)10.1101/2022.01.25.22269794

N/A

0DataRank · unranked

23 citations

Abdullah M. Syed, Noah Brazer, Prachi Saldhi, Miguel Garcia-Knight, Bharath Sreekumar +16 more

Rapid assembly of SARS-CoV-2 genomes reveals attenuation of the Omicron BA.1 variant through NSP6

Nature Communications(2023)10.1038/s41467-023-37787-0

N/A

0DataRank · unranked

71 citations

Irene P. Chen, Jennifer M. Hayashi, Takako Tabata, Keith Walcott, Gabriella R. Kimmerly +14 more

Rapid assembly of SARS-CoV-2 genomes reveals attenuation of the Omicron BA.1 variant through NSP6

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.31.525914

N/A

0DataRank · unranked

5 citations

Irene P. Chen, Jennifer M. Hayashi, Takako Tabata, Keith Walcott, Gabriella R. Kimmerly +14 more

Assembly reactions of SARS-CoV-2 nucleocapsid protein with nucleic acid

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.22.568361

N/A

0DataRank · unranked

5 citations

Abdullah M. Syed, Mir M. Khalid, Ai Nguyen, Alison Ciling, Di Wu +8 more

Assembly of SARS-CoV-2 nucleocapsid protein with nucleic acid

Nucleic Acids Research(2024)10.1093/nar/gkae256

N/A

0DataRank · unranked

44 citations

Abdullah M. Syed, Mir M. Khalid, Ai Nguyen, Alison Ciling, Di Wu +8 more

Regulation of virion production by the ORF8 signal peptide across SARS-CoV-2 variants

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.05.583578

N/A

0DataRank · unranked

8 citations

Irene P. Chen, Frank S Soveg, Taha Y. Taha, Takako Tabata, Rahul Suryawanshi +16 more

Rapid assessment of SARS-CoV-2–evolved variants using virus-like particles

Science(2021)10.1126/science.abl6184

N/A

0DataRank · unranked

356 citations

Taha Y. Taha, Takako Tabata, Irene P. Chen, Alison Ciling, Mir M. Khalid +7 more

Accelerated RNA detection using tandem CRISPR nucleases

Nature Chemical Biology(2021)10.1038/s41589-021-00842-2

N/A

0DataRank · unranked

265 citations

Gavin J. Knott, Dylan C. J. Smock, John J. Desmarais, Sungmin Son, Abdul Bhuiya +43 more

Robotic RNA extraction for SARS-CoV-2 surveillance using saliva samples

PLoS ONE(2021)10.1371/journal.pone.0255690

N/A

0DataRank · unranked

19 citations

Elizabeth C. Stahl, Connor A. Tsuchida, Enrique Lin-Shiao, C. Kimberly Tsui, Kathleen Pestal +16 more

LuNER: Multiplexed SARS-CoV-2 detection in clinical swab and wastewater samples

PLoS ONE(2021)10.1371/journal.pone.0258263

N/A

0DataRank · unranked

6 citations

Allan Gopez, Connor A. Tsuchida, Vinson B. Fan, Erica A. Moehle, Lea B. Witkowsky +21 more

Omicron mutations enhance infectivity and reduce antibody neutralization of SARS-CoV-2 virus-like particles

medRxiv(2021)10.1101/2021.12.20.21268048

N/A

0DataRank · unranked

75 citations

Alison Ciling, Mir M. Khalid, Bharath Sreekumar, Peiyi Chen, G. Renuka Kumar +15 more