🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Daniel Hakim

University of California San Diego

ORCID: 0000-0002-8467-5413
Biochemistry, Genetics and Molecular BiologyHealth ProfessionsMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

0in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 7 papers. Top paper: “Gut microbiome of multiple sclerosis patients and paired household healthy controls reveal associations with disease risk and course”.

Gut microbiome of multiple sclerosis patients and paired household healthy controls reveal associations with disease risk and course

Cell(2022)10.1016/j.cell.2022.08.021
N/A
0.862DataRank · unranked
313 citations

Ryan Baumann, Xiaohui Gao, Myra Mendoza, Sneha Singh, Ilana Katz Sand +38 more

Efficient computation of Faith's phylogenetic diversity with applications in characterizing microbiomes

Genome Research(2021)10.1101/gr.275777.121
N/A
0.574DataRank · unranked
45 citations

Kalen Cantrell, Shi Huang, Daniel McDonald, Niina Haiminen, Anna Paola Carrieri +18 more

Determination of Effect Sizes for Power Analysis for Microbiome Studies Using Large Microbiome Databases

Genes(2023)10.3390/genes14061239
N/A
0.470DataRank · unranked
22 citations

Daniel McDonald, Antonio González, Yoshiki Vázquez‐Baeza, Lingjing Jiang, Climent Casals‐Pascual +6 more

Zebra: Static and Dynamic Genome Cover Thresholds with Overlapping References

mSystems(2022)10.1128/msystems.00758-22
N/A
0.457DataRank · unranked
20 citations

Stephen Wandro, Karsten Zengler, Lívia S. Zaramela, Brent Nowinski, Austin D. Swafford +6 more

Scalable power analysis and effect size exploration of microbiome community differences with Evident

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.19.492684
N/A
0.330DataRank · unranked
8 citations

Daniel McDonald, Antonio González, Yoshiki Vázquez‐Baeza, Lingjing Jiang, Climent Casals‐Pascual +6 more

BIRDMAn: A Bayesian differential abundance framework that enables robust inference of host-microbe associations

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.30.526328
N/A
0DataRank · unranked
17 citations

James T. Morton, Cameron Martino, Gregory D. Sepich‐Poore, Celeste Allaband, Caitlin Guccione +5 more

Dermal injury drives a skin to gut axis that disrupts the intestinal microbiome and intestinal immune homeostasis in mice

Nature Communications(2024)10.1038/s41467-024-47072-3
N/A
0DataRank · unranked
76 citations

Yang Chen, Kellen Cavagnero, Gibraan Rahman, Daniel Hakim, S. Brinton +9 more