🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Chongyuan Luo

University of California, Los Angeles

ORCID: 0000-0002-8541-0695

Also affiliated with University of California San Diego

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
16.7Author DataRank

Indexed papers

5in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

DNA methylation atlas of the mouse brain at single-cell resolution

Nature(2021)10.1038/s41586-020-03182-8
Top 5%
4.3DataRank
Top 5%310 citations

Jingtian Zhou, Wei Tian, Chongyuan Luo, Anna Bartlett, Andrew I. Aldridge +24 more

Papers

Driven by 31 papers — median percentile 95. Top paper: “DNA methylation atlas of the mouse brain at single-cell resolution”.

DNA methylation atlas of the mouse brain at single-cell resolution

Nature(2021)10.1038/s41586-020-03182-8
Top 5%
4.3DataRank
Top 5%310 citations

Jingtian Zhou, Wei Tian, Chongyuan Luo, Anna Bartlett, Andrew I. Aldridge +24 more

A multimodal cell census and atlas of the mammalian primary motor cortex

Nature(2021)10.1038/s41586-021-03950-0
Top 5%
4.3DataRank
Top 5%574 citations

BRAIN Initiative Cell Census Network (BICCN) Corresponding authors, Edward M. Callaway, Joseph R. Ecker, Z. Josh Huang, Ed S. Lein +252 more

A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex

Nature(2021)10.1038/s41586-021-03500-8
Top 5%
4.2DataRank
Top 5%389 citations

Julie A. Harris, Fangming Xie, Stephan Fischer, Ricky S. Adkins, Andrew I. Aldridge +81 more

Spatiotemporal DNA methylome dynamics of the developing mouse fetus

Nature(2020)10.1038/s41586-020-2119-x
N/A
3.6DataRank · unranked
195 citations

Manoj Hariharan, David U. Gorkin, Diane E. Dickel, Chongyuan Luo, Rosa G. Castanon +15 more

Evolution of cellular diversity in primary motor cortex of human, marmoset monkey, and mouse

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.31.016972
N/A
2.4DataRank · unranked
90 citations

Nikolas L. Jorstad, Qiwen Hu, Blue B. Lake, Wei Tian, Brian E. Kalmbach +99 more

Single-cell DNA methylome and 3D multi-omic atlas of the adult mouse brain

Nature(2023)10.1038/s41586-023-06805-y
Top 10%
2.1DataRank
Top 10%132 citations

Qiurui Zeng, Jingtian Zhou, Anna Bartlett, Bang-An Wang, Peter Berube +29 more

An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.29.970558
Top 13%
1.6DataRank
Top 13%63 citations

Julie A. Harris, Fangming Xie, Stephan Fischer, A. Sina Booeshaghi, Ricky S. Adkins +78 more

Losing Dnmt3a dependent methylation in inhibitory neurons impairs neural function by a mechanism impacting Rett syndrome

eLife(2020)10.7554/elife.52981
N/A
1.4DataRank · unranked
58 citations

Kerstin Ure, Ying‐Wooi Wan, Chongyuan Luo, Alexander J. Trostle, Wei Wang +12 more

Deciphering the impact of genomic variation on function

Nature(2024)10.1038/s41586-024-07510-0
N/A
1.1DataRank · unranked
89 citations

Jesse M. Engreitz, Heather A. Lawson, Harinder Singh, Lea M. Starita, Gary C. Hon +95 more

Comparative cellular analysis of motor cortex in human, marmoset and mouse

Nature(2021)10.1038/s41586-021-03465-8
N/A
1.0DataRank · unranked
818 citations

Nikolas L. Jorstad, Qiwen Hu, Blue B. Lake, Wei Tian, Brian E. Kalmbach +101 more

Opportunities and challenges of single-cell and spatially resolved genomics methods for neuroscience discovery

Nature Neuroscience(2024)10.1038/s41593-024-01806-0
N/A
0.691DataRank · unranked
29 citations

Gonçalo Castelo-Branco, Fei Chen, Simone Codeluppi, M. Ryan Corces, Jean Fan +26 more

Single-cell methylation analysis of brain tissue prioritizes mutations that alter transcription

Cell Genomics(2023)10.1016/j.xgen.2023.100454
N/A
0.320DataRank · unranked
6 citations

Matthew G. Heffel, Zeyuan Chen, Joel Mefford, Emilie Marcus, Patrick B. Chen +3 more

Author Correction: Comparative cellular analysis of motor cortex in human, marmoset and mouse

Nature(2022)10.1038/s41586-022-04562-y
N/A
0.317DataRank · unranked
5 citations

Nikolas L. Jorstad, Qiwen Hu, Blue B. Lake, Wei Tian, Brian E. Kalmbach +104 more

Author Correction: Opportunities and challenges of single-cell and spatially resolved genomics methods for neuroscience discovery

Nature Neuroscience(2024)10.1038/s41593-024-01858-2
N/A
0.118DataRank · unranked
1 citations

Gonçalo Castelo-Branco, Fei Chen, Simone Codeluppi, M. Ryan Corces, Jean Fan +26 more

Deep learning imputes DNA methylation states in single cells and enhances the detection of epigenetic alterations in schizophrenia

Cell Genomics(2025)10.1016/j.xgen.2025.100774
N/A
0DataRank · unranked
8 citations

Chongyuan Luo, Hanqing Liu, Matthew G. Heffel, Richard E. Straub, Joel E. Kleinman +5 more

An antagonistic epigenetic mechanism regulating gene expression in pollen revealed through single-nucleus multiomics

Nature Communications(2025)10.1038/s41467-025-65686-z
N/A
0DataRank · unranked
1 citations

Lucia Ichino, Tyler Buckley, Brandon A. Boone, Jaewon Yun, Kevin D. Abuhanna +6 more

Integrated ambient modeling and genetic demultiplexing of single-cell RNA+ATAC multiome experiments with Ambimux

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.21.671671
N/A
0DataRank · unranked
0 citations

Terence Li, Seung Hyuk Lee, Uma Thanigai Arasu, Ilakya Selvarajan, Tiit Örd +13 more

map3C: a computational tool for processing multiomic single-cell Hi-C data

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.10.681728
N/A
0DataRank · unranked
0 citations

Ye Wang, Frank Alber, Jason Ernst, Chongyuan Luo, Joseph Galasso

Rapid cost-effective viral genome sequencing by V-seq

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.15.252510
N/A
0DataRank · unranked
13 citations

James Boocock, Jacob M. Tome, Sukantha Chandrasekaran, Evann E. Hilt, Yi Zhang +14 more

Iterative Refinement of Cellular Identity from Single-Cell Data Using Online Learning

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.16.909861
N/A
0DataRank · unranked
9 citations

Sebastian Preissl, Chongyuan Luo, Rosa G. Castanon, Justin P. Sandoval, Angeline C. Rivkin +6 more

Applications of Single-Cell DNA Sequencing

Annual Review of Genomics and Human Genetics(2021)10.1146/annurev-genom-111320-090436
N/A
0DataRank · unranked
121 citations

Anjali Gupta Hinch, Chongyuan Luo, Gilad D. Evrony

Massively scaled-up testing for SARS-CoV-2 RNA via next-generation sequencing of pooled and barcoded nasal and saliva samples

Nature Biomedical Engineering(2021)10.1038/s41551-021-00754-5
N/A
0DataRank · unranked
78 citations

Laila Sathe, Chetan Munugala, Eric M. Jones, Molly Gasperini, Nathan B. Lubock +36 more

Robust enhancer-gene regulation identified by single-cell transcriptomes and epigenomes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.25.465795
N/A
0DataRank · unranked
2 citations

Ethan J. Armand, Zizhen Yao, Hanqing Liu, Anna Bartlett, M. Margarita Behrens +14 more

Broad transcriptomic dysregulation occurs across the cerebral cortex in ASD

Nature(2022)10.1038/s41586-022-05377-7
N/A
0DataRank · unranked
294 citations

Jillian R. Haney, Brie Wamsley, Chloe X. Yap, Sepideh Parhami, Prashant S. Emani +21 more

Single nucleus multi-omics identifies human cortical cell regulatory genome diversity

Cell Genomics(2022)10.1016/j.xgen.2022.100107
N/A
0DataRank · unranked
163 citations

Hanqing Liu, Fangming Xie, Ethan J. Armand, Kimberly Siletti, Trygve E. Bakken +28 more

Robust enhancer-gene regulation identified by single-cell transcriptomes and epigenomes

Cell Genomics(2023)10.1016/j.xgen.2023.100342
N/A
0DataRank · unranked
22 citations

Ethan J. Armand, Zizhen Yao, Hanqing Liu, Anna Bartlett, M. Margarita Behrens +14 more

Epigenome erosion in Alzheimer’s disease brain cells and induced neurons

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.15.562394
N/A
0DataRank · unranked
8 citations

Jeffrey R. Jones, Jingtian Zhou, Wei Tian, Yue Wu, Wenliang Wang +19 more

Temporally distinct 3D multi-omic dynamics in the developing human brain

Nature(2024)10.1038/s41586-024-08030-7
N/A
0DataRank · unranked
61 citations

Jingtian Zhou, Yi Zhang, Dong-Sung Lee, Kangcheng Hou, Oier Pastor-Alonso +25 more

Complementation testing identifies genes mediating effects at quantitative trait loci underlying fear-related behavior

Cell Genomics(2024)10.1016/j.xgen.2024.100545
N/A
0DataRank · unranked
7 citations

Rachel X. Chen, Nathan LaPierre, Zeyuan Chen, Joel Mefford, Emilie Marcus +6 more

Complementation testing identifies causal genes at quantitative trait loci underlying fear related behavior

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.03.574060
N/A
0DataRank · unranked
0 citations

Rachel Chen, Nathan LaPierre, Zeyuan Chen, Joel Mefford, Emilie Marcus +6 more

scMeFormer: a transformer-based deep learning model for imputing DNA methylation states in single cells enhances the detection of epigenetic alterations in schizophrenia

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.25.577200
N/A
0DataRank · unranked
0 citations

Chongyuan Luo, Hanqing Liu, Matthew G. Heffel, Richard E. Straub, Joel E. Kleinman +5 more