Xinghua Lu

Also affiliated with Guangzhou Huali College

Biochemistry, Genetics and Molecular BiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 25 papers. Top paper: “eIF4E S209 phosphorylation licenses myc- and stress-driven oncogenesis”.

eIF4E S209 phosphorylation licenses myc- and stress-driven oncogenesis

eLife(2020)10.7554/elife.60151

N/A

1.3DataRank · unranked

38 citations

Xiangyun Li, Xiang Xu, Brian J. Leibowitz, Jingshan Tong, Lujia Chen +10 more

Learning to encode cellular responses to systematic perturbations with deep generative models

npj Systems Biology and Applications(2020)10.1038/s41540-020-00158-2

N/A

0DataRank · unranked

14 citations

Michael Q. Ding, Xinghua Lu, Yifan Xue

Explicit representation of protein activity states significantly improves causal discovery of protein phosphorylation networks

BMC Bioinformatics(2020)10.1186/s12859-020-03676-2

N/A

0DataRank · unranked

5 citations

Xiaojun Ma, Gregory F. Cooper, Xinghua Lu, Jinling Liu

Learning to Encode Cellular Responses to Systematic Perturbations with Deep Generative Models

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.14.906768

N/A

0DataRank · unranked

2 citations

Michael Q. Ding, Xinghua Lu, Yifan Xue

Investigating immune and non-immune cell interactions in head and neck tumors by single-cell RNA sequencing

Nature Communications(2021)10.1038/s41467-021-27619-4

N/A

0DataRank · unranked

297 citations

Aditi Kulkarni, Anthony R. Cillo, P.M.L. Santos, Anna K. Roble, Sayali Onkar +17 more

Chitinase-3-like 1 protein complexes modulate macrophage-mediated immune suppression in glioblastoma

Journal of Clinical Investigation(2021)10.1172/jci147552

N/A

0DataRank · unranked

146 citations

Yinan Jiang, Zhengwei Li, Lingxiang Wu, Ulises Santiago, Han Zou +24 more

GRWD1-WDR5-MLL2 Epigenetic Complex Mediates H3K4me3 Mark and Is Essential for Kaposi’s Sarcoma-Associated Herpesvirus-Induced Cellular Transformation

mBio(2021)10.1128/mbio.03431-21

N/A

0DataRank · unranked

7 citations

Songjian Lu, Lifan Liang, Xian Wang, Li Wan, Tingting Li +8 more

Interpretable deep learning for chromatin-informed inference of transcriptional programs driven by somatic alterations across cancers

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.07.459263

N/A

0DataRank · unranked

2 citations

Xiaojun Ma, Drake Palmer, Russell Schwartz, Xinghua Lu, Hatice U. Osmanbeyoglu +1 more

Machine Learning Based Algorithms to Impute PaO 2 from SpO2 Values and Development of an Online Calculator

Research Square(2021)10.21203/rs.3.rs-1053360/v1

N/A

0DataRank · unranked

2 citations

Jill Zupetic, Mohammadreza Tabary, Rebecca DeSensi, Mehdi Nouraie, Xinghua Lu +3 more

Imputation of PaO2 from SpO2 values from the MIMIC-III Critical Care Database Using Machine-Learning Based Algorithms

medRxiv(2021)10.1101/2021.04.21.21255877

N/A

0DataRank · unranked

1 citations

Jill Zupetic, Mehdi Nouraie, Xinghua Lu, Richard D. Boyce, Janet Lee +1 more

De novo Prediction of Cell-Drug Sensitivities Using Deep Learning-based Graph Regularized Matrix Factorization

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.11.462450

N/A

0DataRank · unranked

0 citations

Yifeng Tao, Ke Yu, Yifan Xue, Russell Schwartz, Xinghua Lu +1 more

CDC20-Mediated hnRNPU Ubiquitination Regulates Chromatin Condensation and Anti-Cancer Drug Response

Cancers(2022)10.3390/cancers14153732

N/A

0DataRank · unranked

17 citations

Olena Odnokoz, Yifan Xue, Xinghua Lu, Massimo Cristofanilli, Yong Wan +1 more

Targeting Myc-driven stress vulnerability in mutant KRAS colorectal cancer

Molecular Biomedicine(2022)10.1186/s43556-022-00070-7

N/A

0DataRank · unranked

11 citations

Brian J. Leibowitz, Yingpeng Peng, Lin Shen, Lujia Chen, Charlie Kuang +5 more

Interpretable deep learning for chromatin-informed inference of transcriptional programs driven by somatic alterations across cancers

Nucleic Acids Research(2022)10.1093/nar/gkac881

N/A

0DataRank · unranked

10 citations

Xiaojun Ma, Drake Palmer, Russell Schwartz, Xinghua Lu, Hatice U. Osmanbeyoglu +1 more

An individualized causal framework for learning intercellular communication networks that define microenvironments of individual tumors

PLoS Computational Biology(2022)10.1371/journal.pcbi.1010761

N/A

0DataRank · unranked

10 citations

Lujia Chen, Cornelius Kürten, Fattaneh Jabbari, Lazar Vujanović, Ying Ding +9 more

Machine learning based algorithms to impute PaO2 from SpO2 values and development of an online calculator

Scientific Reports(2022)10.1038/s41598-022-12419-7

N/A

0DataRank · unranked

9 citations

Jill Zupetic, Mohammadreza Tabary, Rebecca DeSensi, Mehdi Nouraie, Xinghua Lu +3 more

Testing of a machine learning (ML) model for ability to predict oxaliplatin and bevacizumab (bev) benefit in NRG Oncology/NSABP C-07 and C-08.

Journal of Clinical Oncology(2022)10.1200/jco.2022.40.16_suppl.3607

N/A

0DataRank · unranked

1 citations

Lujia Chen, Ying Wang, Chunhui Cai, Rim S. Kim, Corey Lipchik +12 more

An individualized Bayesian method for estimating genomic variants of hypertension

medRxiv(2022)10.1101/2022.06.25.22276897

N/A

0DataRank · unranked

0 citations

Chunhui Cai, Dennis M. McNamara, Ying Ding, Gregory F. Cooper, Xinghua Lu +2 more

Accurate estimation of rare cell type fractions from tissue omics data via hierarchical deconvolution

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.15.532820

N/A

0DataRank · unranked

4 citations

Manqi Cai, Xinghua Lu, Chris McKennan, Jiebiao Wang, Penghui Huang

FAK loss reduces BRAFV600E-induced ERK phosphorylation to promote intestinal stemness and cecal tumor formation

Research Square(2023)10.21203/rs.3.rs-2531119/v1

N/A

0DataRank · unranked

0 citations

Huaibin Ge, Shih–Fan Kuan, Chunhui Cai, Xinghua Lu, Farzad Esni +5 more

An interpretable deep learning framework for genome-informed precision oncology

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.11.548534

N/A

0DataRank · unranked

0 citations

Gregory Cooper, Lujia Chen, Xinghua Lu, Shuangxia Ren

Pharmacological suppression of the OTUD4/CD73 proteolytic axis revives antitumor immunity against immune-suppressive breast cancers

Journal of Clinical Investigation(2024)10.1172/jci176390

N/A

0DataRank · unranked

30 citations

Anupam Banerjee, Ping Xie, Andrei A. Ivanov, Amad Uddin, Qiao Jiao +16 more

Accurate estimation of rare cell-type fractions from tissue omics data via hierarchical deconvolution

The Annals of Applied Statistics(2024)10.1214/23-aoas1829

N/A

0DataRank · unranked

5 citations

Manqi Cai, Xinghua Lu, Chris McKennan, Jiebiao Wang, Penghui Huang

Pharmacologic Suppression of B7-H4 Glycosylation Restores Antitumor Immunity in Immune-Cold Breast Cancers

Cancer Discovery(2020)10.1158/2159-8290.cd-20-0402

N/A

0DataRank · unranked

154 citations

Zhuan Zhou, Hongchun Li, Yifan Xue, Xinghua Lu, İvet Bahar +5 more

mTORC1 Suppression by Trp53 Mutation Drives Resistance to Immune Checkpoint Blockade

Research Square(2025)10.21203/rs.3.rs-8214123/v1

N/A

0DataRank · unranked

0 citations

Alireza Labani‐Motlagh, Yang Li, David Shihong Gao, Eunseuk Lee, Vincent Chen +9 more