Ashley M. Sidebottom

Also affiliated with University of Chicago, Duchossois Group (United States)

Biochemistry, Genetics and Molecular BiologyMedicineAgricultural and Biological SciencesEnvironmental Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 29 papers. Top paper: “Dietary- and host-derived metabolites are used by diverse gut bacteria for anaerobic respiration”.

Dietary- and host-derived metabolites are used by diverse gut bacteria for anaerobic respiration

Nature Microbiology(2024)10.1038/s41564-023-01560-2

N/A

1.7DataRank · unranked

74 citations

Isaac T. Younker, Matthew S. Schechter, Paola Nol Bernardino, Raphaël Méheust, Joshua Stemczynski +17 more

Immunomodulatory fecal metabolites are associated with mortality in COVID-19 patients with respiratory failure

Nature Communications(2022)10.1038/s41467-022-34260-2

N/A

0DataRank · unranked

71 citations

Nicholas P. Dylla, Steven D. Pearson, P.A. Lecompte-Osorio, Ravi Nayak, Maryam Khalid +22 more

Dietary- and host-derived metabolites are used by diverse gut bacteria for anaerobic respiration

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.26.521950

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0DataRank · unranked

5 citations

Isaac T. Younker, Matthew S. Schechter, Paola Nol Bernardino, Raphaël Méheust, Joshua Stemczynski +17 more

Distinct energy-coupling factor transporter subunits enable flavin acquisition and extracytosolic trafficking for extracellular electron transfer in Listeria monocytogenes

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.04.515267

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0DataRank · unranked

1 citations

Shuo Huang, Frank Lee, Raphaël Méheust, Anthony T. Iavarone, Ashley M. Sidebottom +4 more

Dynamic genetic adaptation of Bacteroides thetaiotaomicron murine gut colonization

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.23.481734

N/A

0DataRank · unranked

0 citations

Megan S. Kennedy, Orlando DeLeon, Jacie Bissell, Florian Trigodet, Karen Lolans +10 more

Peptide YY: A Paneth cell antimicrobial peptide that maintains Candida gut commensalism

Science(2023)10.1126/science.abq3178

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0DataRank · unranked

94 citations

Brian M. Peters, Diana La Torre, Ashley M. Sidebottom, Yiwei Tao, Xiaorong Zhu +13 more

Bifidobacteria metabolize lactulose to optimize gut metabolites and prevent systemic infection in patients with liver disease

Nature Microbiology(2023)10.1038/s41564-023-01493-w

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0DataRank · unranked

66 citations

Huaiying Lin, Christopher Lehmann, Nicholas P. Dylla, Cody G. Cole, Jake D. Mostad +27 more

Limosilactobacillus reuteri normalizes blood–brain barrier dysfunction and neurodevelopment deficits associated with prenatal exposure to lipopolysaccharide

Gut Microbes(2023)10.1080/19490976.2023.2178800

N/A

0DataRank · unranked

35 citations

Xiaobing Fan, Lei Lu, Yueyue Yu, Erica Markiewicz, Jessica Little +3 more

Dynamic genetic adaptation of Bacteroides thetaiotaomicron during murine gut colonization

Cell Reports(2023)10.1016/j.celrep.2023.113009

N/A

0DataRank · unranked

30 citations

Manjing Zhang, Orlando DeLeon, Jacie Bissell, Florian Trigodet, Karen Lolans +11 more

Distinct Energy-Coupling Factor Transporter Subunits Enable Flavin Acquisition and Extracytosolic Trafficking for Extracellular Electron Transfer in Listeria monocytogenes

mBio(2023)10.1128/mbio.03085-22

N/A

0DataRank · unranked

19 citations

Shuo Huang, Frank Lee, Raphaël Méheust, Anthony T. Iavarone, Ashley M. Sidebottom +4 more

Plasma metabolites with mechanistic and clinical links to the neurovascular disease cavernous angioma

Communications Medicine(2023)10.1038/s43856-023-00265-1

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0DataRank · unranked

14 citations

Bingqing Xie, Ying Li, Je Yeong Sone, Sharbel Romanos, Chang Chen +27 more

Reduced immunomodulatory metabolite concentrations in peri-transplant fecal samples from heart allograft recipients

Frontiers in Transplantation(2023)10.3389/frtra.2023.1182534

N/A

0DataRank · unranked

6 citations

Huaiying Lin, Jiho Han, Emerald Adler, Jaye Boissiere, Maryam Khalid +13 more

An evolution-based framework for describing human gut bacteria

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.04.569969

N/A

0DataRank · unranked

3 citations

Robert Y. Chen, Hannah Giba, Vivek Behera, Bidisha Barat, Anitha Sundararajan +5 more

Microbially-catalyzed conjugation of GABA and tyramine to bile acids

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.25.559407

N/A

0DataRank · unranked

2 citations

Aretha Fiebig, Matthew K. Schnizlein, Mary McMillin, Amber R. Rose, Jason Koval +7 more

The Host-specific Microbiota is Required for Diet-Specific Metabolic Homeostasis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.05.565654

N/A

0DataRank · unranked

1 citations

Bingqing Xie, Tyler J. Long, Marissa StGeorge, Alan Tan, Sumeed Manzoor +6 more

Comprehensive analyses of a large human gut Bacteroidales culture collection reveal species- and strain-level diversity and evolution

Cell Host & Microbe(2024)10.1016/j.chom.2024.08.016

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0DataRank · unranked

39 citations

Cody G. Cole, Michael J. Coyne, Huaiying Lin, Nicholas P. Dylla, Rita C. Smith +17 more

Microbially catalyzed conjugation of GABA and tyramine to bile acids

Journal of Bacteriology(2024)10.1128/jb.00426-23

N/A

0DataRank · unranked

15 citations

Aretha Fiebig, Matthew K. Schnizlein, Mary McMillin, Amber R. Rose, Jason Koval +7 more

Protection against Clostridioides difficile disease by a naturally avirulent strain

Cell Host & Microbe(2024)10.1016/j.chom.2024.11.003

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0DataRank · unranked

14 citations

S.R. Harper, Emma McSpadden, Sophie S Son, Marie-Maude Allen, Huaiying Lin +15 more

Protection against Clostridioides difficile disease by a naturally avirulent C. difficile strain

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.06.592814

N/A

0DataRank · unranked

3 citations

S.R. Harper, Emma McSpadden, Sophie S Son, Marie-Maude Allen, Huaiying Lin +15 more

Microbiome mismatches from microbiota transplants lead to persistent off-target metabolic and immunomodulatory effects

Cell(2025)10.1016/j.cell.2025.05.014

N/A

0DataRank · unranked

48 citations

Mora Mocanu, Alan Tan, Ashley M. Sidebottom, Jason Koval, Hugo D Ceccato +18 more

Enterobactin inhibits microbiota-dependent activation of AhR to promote bacterial sepsis in mice

Nature Microbiology(2025)10.1038/s41564-024-01882-9

N/A

0DataRank · unranked

41 citations

Jason Xiao, Sanjiv Hyoju, Adam Lam, Daniel Kim, Ashley M. Sidebottom +14 more

Gut bacteria metabolize natural and synthetic steroid hormones via the reductive OsrABC pathway

Cell Host & Microbe(2025)10.1016/j.chom.2025.09.014

N/A

0DataRank · unranked

14 citations

Kaylie Scorza, L. Ecker, Paola Nol Bernardino, Alexander S. Little, Mary McMillin +9 more

Fecal Microbial Profiles and Short-Chain Fatty Acid/Bile Acid Metabolomics in Patients With Age-Related Macular Degeneration: A Pilot Study

Investigative Ophthalmology & Visual Science(2025)10.1167/iovs.66.4.21

N/A

0DataRank · unranked

11 citations

Jason Xiao, Amir Mani, Quadis Evans, Christopher Phung, Hugo Barba +14 more

Circulating molecules reflect imaging biomarkers of hemorrhage in cerebral cavernous malformations

Journal of Cerebral Blood Flow & Metabolism(2025)10.1177/0271678x251314366

N/A

0DataRank · unranked

5 citations

Dehua Bi, Serena Kinkade, Diana Vera Cruz, Abhinav Srinath, Aditya Jhaveri +16 more

Subspecies phylogeny in the human gut revealed by co-evolutionary constraints across the bacterial kingdom

Cell Systems(2025)10.1016/j.cels.2024.12.008

N/A

0DataRank · unranked

1 citations

Robert Y. Chen, Hannah Giba, Vivek Behera, Bidisha Barat, Anitha Sundararajan +5 more

DNA-utilization loci enable exogenous DNA metabolism in gut Bacteroidales

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2505388122

N/A

0DataRank · unranked

1 citations

Agnieszka Nurek, Joshua Stemczynski, Kristof Turan, Alexander S. Little, Michael J. Coyne +5 more

Lantibiotic-producing bacteria impact microbiome resilience and colonization resistance

Cell Host & Microbe(2025)10.1016/j.chom.2025.11.007

N/A

0DataRank · unranked

1 citations

Zhenrun J. Zhang, Shravan R. Dommaraju, Qiwen Dong, Rosemary L. Pope, Sophie S Son +9 more

Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

UNC Libraries(2020)10.17615/dd92-mf79

N/A

0DataRank · unranked

143 citations

Peng Yao, Kerry L. McPhail, Lixin Zhang, Kathleen Dorrestein, Wenyuan Shi +95 more

DNA-utilization loci enable exogenous DNA metabolism in gut Bacteroidales

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.03.18.642099

N/A

0DataRank · unranked

1 citations

Agnieszka Nurek, Joshua Stemczynski, Kristof Turan, Michael J. Coyne, Mary McMillin +4 more