Thomas M. Hyde

Also affiliated with Johns Hopkins Medicine, Lieber Institute for Brain Development

Biochemistry, Genetics and Molecular BiologyNeuroscience

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

3.2Author DataRank

Indexed papers

4in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A data-driven single-cell and spatial transcriptomic map of the human prefrontal cortex

Science(2024)10.1126/science.adh1938

Top 18%

1.2DataRank

Top 18%69 citations

Abby Spangler, Nicholas J. Eagles, Kelsey D. Montgomery, Sang Ho Kwon, Boyi Guo +90 more

Papers

Driven by 52 papers — median percentile 73. Top paper: “Single-cell multi-cohort dissection of the schizophrenia transcriptome”.

Single-cell multi-cohort dissection of the schizophrenia transcriptome

Science(2024)10.1126/science.adg5136

N/A

1.3DataRank · unranked

125 citations

Shahin Mohammadi, José Dávila-Velderrain, Sivan Subburaju, Daniel Reed Tso, Makayla Hourihan +196 more

Associations of psychiatric disease and ageing with FKBP5 expression converge on superficial layer neurons of the neocortex

Acta Neuropathologica(2023)10.1007/s00401-023-02541-9

N/A

1.3DataRank · unranked

55 citations

Janine Knauer-Arloth, Darina Czamara, Katrina Z. Edmond, Malosree Maitra, Anna S. Fröhlich +31 more

A data-driven single-cell and spatial transcriptomic map of the human prefrontal cortex

Science(2024)10.1126/science.adh1938

Top 18%

1.2DataRank

Top 18%69 citations

Abby Spangler, Nicholas J. Eagles, Kelsey D. Montgomery, Sang Ho Kwon, Boyi Guo +90 more

Massively parallel characterization of regulatory elements in the developing human cortex

Science(2024)10.1126/science.adh0559

N/A

1.2DataRank · unranked

61 citations

Sean Whalen, Marilyn Steyert, Ryan Ziffra, Pawel F. Przytycki, Fumitaka Inoue +197 more

Cross-ancestry atlas of gene, isoform, and splicing regulation in the developing human brain

Science(2024)10.1126/science.adh0829

Top 26%

0.765DataRank

Top 26%50 citations

Michael Margolis, Rujia Dai, Pan Zhang, Pawel F. Przytycki, Daniel Vo +95 more

Transcriptomic sex differences in postmortem brain samples from patients with psychiatric disorders

Science Translational Medicine(2024)10.1126/scitranslmed.adh9974

Top 27%

0.733DataRank

Top 27%22 citations

Cuihua Xia, Yi Jiang, Yu Chen, Jiaqi Zhou, Rujia Dai +95 more

Analysis of the caudate nucleus transcriptome in individuals with schizophrenia highlights effects of antipsychotics and new risk genes

Nature Neuroscience(2022)10.1038/s41593-022-01182-7

N/A

0.648DataRank · unranked

74 citations

Qiang Chen, Andrew E. Jaffe, Joshua M. Stolz, Leonardo Collado‐Torres, Louise A. Huuki-Myers +32 more

Genome-wide sequencing-based identification of methylation quantitative trait loci and their role in schizophrenia risk

Nature Communications(2021)10.1038/s41467-021-25517-3

N/A

0.641DataRank · unranked

71 citations

Nicholas J. Eagles, Richard Wilton, Amanda J. Price, Stephen A. Semick, Leonardo Collado‐Torres +9 more

Multi-ancestry transcriptome-wide association analyses yield insights into tobacco use biology and drug repurposing

Nature Genetics(2023)10.1038/s41588-022-01282-x

N/A

0.606DataRank · unranked

56 citations

Xingyan Wang, Seon-Kyeong Jang, Bryan C. Quach, J. Dylan Weissenkampen, Chachrit Khunsriraksakul +85 more

Individual variation in the emergence of anterior-to-posterior neural fates from human pluripotent stem cells

Stem Cell Reports(2024)10.1016/j.stemcr.2024.07.004

N/A

0.560DataRank · unranked

18 citations

Seungmae Seo, Genevieve L. Stein-O’Brien, Amritha Jaishankar, Kazuya Ogawa, Nicola Micali +19 more

Sex affects transcriptional associations with schizophrenia across the dorsolateral prefrontal cortex, hippocampus, and caudate nucleus

Nature Communications(2024)10.1038/s41467-024-48048-z

Top 35%

0.554DataRank

Top 35%18 citations

Ria Arora, Arthur Sant’Anna Feltrin, Geo Pertea, Hunter H. Giles, Joshua M. Stolz +10 more

Integrated single cell and unsupervised spatial transcriptomic analysis defines molecular anatomy of the human dorsolateral prefrontal cortex

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.15.528722

N/A

0.520DataRank · unranked

31 citations

Abby Spangler, Nicholas J. Eagles, Kelsey D. Montgomery, Sang Ho Kwon, Boyi Guo +18 more

Analysis of gene expression in the postmortem brain of neurotypical Black Americans reveals contributions of genetic ancestry

Nature Neuroscience(2024)10.1038/s41593-024-01636-0

N/A

0.505DataRank · unranked

28 citations

Qiang Chen, Nicholas J. Eagles, Louise A. Huuki-Myers, Leonardo Collado‐Torres, Joshua M. Stolz +9 more

Omics Approaches to Investigate the Pathogenesis of Suicide

Biological Psychiatry(2024)10.1016/j.biopsych.2024.05.017

N/A

0.473DataRank · unranked

10 citations

Yang Xiao, Tarjinder Singh, Chenxu Zhu, Mbemba Jabbi, Harry Pantazopoulos +16 more

Human archetypal pluripotent stem cells differentiate into trophoblast stem cells via endogenous BMP5/7 induction without transitioning through naive state

Scientific Reports(2024)10.1038/s41598-024-53381-w

N/A

0.462DataRank · unranked

10 citations

Amilton de Lima Barbosa, Bruno Henrique Silva Araújo, Verônica Euclydes, Bailey Spiegelberg, Hyeon Jin Cho +19 more

Dopamine signaling enriched striatal gene set predicts striatal dopamine synthesis and physiological activity in vivo

Nature Communications(2024)10.1038/s41467-024-47456-5

N/A

0.442DataRank · unranked

18 citations

Daniel P. Eisenberg, Roberta Passiatore, Enrico D’Ambrosio, Linda A. Antonucci, Jasmine S. Bettina +20 more

Spatiotemporal analysis of gene expression in the human dentate gyrus reveals age-associated changes in cellular maturation and neuroinflammation

Cell Reports(2025)10.1016/j.celrep.2025.115300

N/A

0.434DataRank · unranked

17 citations

Madhavi Tippani, Heena R. Divecha, Alexis R. Papariello, Ryan A. Miller, Erik D. Nelson +10 more

The gene expression landscape of the human locus coeruleus revealed by single-nucleus and spatially-resolved transcriptomics

eLife(2023)10.7554/elife.84628

N/A

0.434DataRank · unranked

17 citations

Heena R. Divecha, Matthew N. Tran, Sang‐Ho Kwon, Abby Spangler, Kelsey D. Montgomery +10 more

The gene expression landscape of the human locus coeruleus revealed by single-nucleus and spatially-resolved transcriptomics

eLife(2024)10.7554/elife.84628.3

N/A

0.434DataRank · unranked

17 citations

Heena R. Divecha, Matthew N. Tran, Sang Ho Kwon, Abby Spangler, Kelsey D. Montgomery +10 more

Orthogonal approaches required to measure proteasome composition and activity in mammalian brain tissue

Journal of Biological Chemistry(2023)10.1016/j.jbc.2023.104811

N/A

0.416DataRank · unranked

15 citations

Rahul Bharadwaj, Joel E. Kleinman, Daniel R. Weinberger, Thomas M. Hyde, Cory J. White +3 more

Transcriptomic characterization of human lateral septum neurons reveals conserved and divergent marker genes across species

iScience(2025)10.1016/j.isci.2025.111820

N/A

0.385DataRank · unranked

12 citations

Seyun Oh, Svitlana V. Bach, Yufeng Du, Ryan A. Miller, Joel E. Kleinman +5 more

The gene expression landscape of the human locus coeruleus revealed by single-nucleus and spatially-resolved transcriptomics

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.28.514241

N/A

0.354DataRank · unranked

5 citations

Heena R. Divecha, Matthew N. Tran, Sang Ho Kwon, Abby Spangler, Kelsey D. Montgomery +10 more

Comparison of gene expression in living and postmortem human brain

medRxiv(2023)10.1101/2023.11.08.23298172

N/A

0.345DataRank · unranked

9 citations

Lambertus Klei, Chunyu Liu, Joel E. Kleinman, Thomas M. Hyde, Daniel H. Geschwind +4 more

Generation of four postmortem dura-derived iPS cell lines from four control individuals with genotypic and brain-region-specific transcriptomic data available through the BrainSEQ consortium.

Stem Cell Research(2020)10.1016/j.scr.2020.101806

N/A

0.312DataRank · unranked

7 citations

Kynon JM Benjamin, Anna C. Brandtjen, Ethan Tietze, Samuel Allen, Apuã C.M. Paquola +4 more

Somatic mutations reveal hypermutable brains and are associated with neuropsychiatric disorders

medRxiv(2022)10.1101/2022.02.09.22269114

N/A

0.292DataRank · unranked

6 citations

Liana Fasching, Yifan Wang, Joo Heon Shin, Milovan Šuvakov, Yeongjun Jang +19 more

Variation in TAF1 Expression in Female Carrier-Induced Pluripotent Stem Cells and Human Brain Ontogeny Has Implications for Adult Neostriatum Vulnerability in X-Linked Dystonia Parkinsonism

eNeuro(2022)10.1523/eneuro.0129-22.2022

N/A

0.287DataRank · unranked

5 citations

Ricardo S. Jacomini, Bareera Qamar, Kynon JM Benjamin, Ria Arora, Tomoyo Sawada +11 more

Molecular phenotypes associated with antipsychotic drugs in the human caudate nucleus

medRxiv(2021)10.1101/2021.10.11.21264848

N/A

0.269DataRank · unranked

5 citations

Nicholas J. Eagles, Amy Deep‐Soboslay, Ran Tao, Shizhong Han, Richard Wilton +6 more

The gene expression landscape of the human locus coeruleus revealed by single-nucleus and spatially-resolved transcriptomics

(2023)10.7554/elife.84628.1

N/A

0.241DataRank · unranked

4 citations

Heena R. Divecha, Matthew N. Tran, Sang Ho Kwon, Abby Spangler, Kelsey D. Montgomery +10 more

Investigating trait variability of gene co-expression network architecture in brain by controlling for genomic risk of schizophrenia

PLoS Genetics(2023)10.1371/journal.pgen.1010989

N/A

0.241DataRank · unranked

4 citations

Qiang Chen, Giulio Pergola, Pasquale Di Carlo, Shizhong Han, Joo Heon Shin +4 more

Transcriptomic analysis of the human habenula in schizophrenia

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.26.582081

N/A

0.241DataRank · unranked

4 citations

Bukola Ajanaku, Erik D. Nelson, Renee Garcia-Flores, Nicholas J. Eagles, Kelsey D. Montgomery +17 more

Integrating gene expression and imaging data across Visium capture areas with visiumStitched

BMC Genomics(2024)10.1186/s12864-024-10991-y

N/A

0.241DataRank · unranked

4 citations

Svitlana V. Bach, Madhavi Tippani, Prashanthi Ravichandran, Yufeng Du, Ryan A. Miller +5 more

Transcriptomic diversity of amygdalar subdivisions across humans and nonhuman primates

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.18.618721

N/A

0.241DataRank · unranked

4 citations

Rita Cervera‐Juanes, Svitlana V. Bach, Lamya Ben Ameur, Madeline R. Valentine, Evan A. Simons +14 more

Transcriptomic diversity of amygdalar subdivisions across humans and nonhuman primates

Science Advances(2025)10.1126/sciadv.adw1029

N/A

0.208DataRank · unranked

3 citations

Rita Cervera‐Juanes, Svitlana V. Bach, Lamya Ben Ameur, Madeline R. Valentine, Evan A. Simons +14 more

Widespread methylation quantitative trait loci and their role in schizophrenia risk

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.24.311878

N/A

0.192DataRank · unranked

2 citations

Nicholas J. Eagles, Richard Wilton, Amanda J. Price, Stephen A. Semick, Leonardo Collado‐Torres +8 more

Characterizing the dynamic and functional DNA methylation landscape in the developing human cortex

Research Square(2020)10.21203/rs.2.19747/v1

N/A

0.165DataRank · unranked

2 citations

Amanda J. Price, Richard Wilton, Leonardo Collado‐Torres, Ran Tao, Nicholas J. Eagles +6 more

Genetic and environmental contributions to ancestry differences in gene expression in the human brain

Research Square(2023)10.21203/rs.3.rs-2922172/v1

N/A

0.165DataRank · unranked

2 citations

Qiang Chen, Nicholas J. Eagles, Louise A. Huuki-Myers, Leonardo Collado‐Torres, Joshua M. Stolz +8 more

Dopamine and schizophrenia from bench to bedside: Discovery of a striatal co-expression risk gene set that predicts in vivo measures of striatal function

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.20.558594

N/A

0.104DataRank · unranked

1 citations

Daniel P. Eisenberg, Roberta Passiatore, Enrico D’Ambrosio, Linda A. Antonucci, Qiang Chen +20 more

Genetic and environmental contributions to ancestry differences in gene expression in the human brain

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.28.534458

N/A

0.104DataRank · unranked

1 citations

Qiang Chen, Nicholas J. Eagles, Louise A. Huuki-Myers, Leonardo Collado‐Torres, Joshua M. Stolz +9 more

Integrating gene expression and imaging data across Visium capture areas with visiumStitched

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.08.08.607222

N/A

0.104DataRank · unranked

1 citations

Svitlana V. Bach, Madhavi Tippani, Prashanthi Ravichandran, Yufeng Du, Ryan A. Miller +5 more

Recapitulation of Perturbed Striatal Gene Expression Dynamics of Donors’ Brains With Ventral Forebrain Organoids Derived From the Same Individuals With Schizophrenia

American Journal of Psychiatry(2023)10.1176/appi.ajp.20220723

N/A

0DataRank · unranked

17 citations

André R. Barbosa, Bruno Henrique Silva Araújo, Alejandra E. McCord, Laura D’Ignazio, Kynon JM Benjamin +12 more

Ventral forebrain organoids derived from individuals with schizophrenia recapitulate perturbed striatal gene expression dynamics of the donor’s brains

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.26.493589

N/A

0DataRank · unranked

0 citations

Amilton de Lima Barbosa, Bruno Henrique Silva Araújo, Alejandra E. McCord, Laura D’Ignazio, Kynon JM Benjamin +9 more

Author Response: The gene expression landscape of the human locus coeruleus revealed by single-nucleus and spatially-resolved transcriptomics

(2023)10.7554/elife.84628.1.sa0

N/A

0DataRank · unranked

0 citations

Heena R. Divecha, Matthew N. Tran, Sang Ho Kwon, Abby Spangler, Kelsey D. Montgomery +10 more

Reviewer #2 (Public Review): The gene expression landscape of the human locus coeruleus revealed by single-nucleus and spatially-resolved transcriptomics

(2023)10.7554/elife.84628.2.sa1

N/A

0DataRank · unranked

0 citations

Heena R. Divecha, Matthew N. Tran, Sang Ho Kwon, Abby Spangler, Kelsey D. Montgomery +10 more

The gene expression landscape of the human locus coeruleus revealed by single-nucleus and spatially-resolved transcriptomics

(2023)10.7554/elife.84628.2

N/A

0DataRank · unranked

0 citations

Heena R. Divecha, Matthew N. Tran, Sang Ho Kwon, Abby Spangler, Kelsey D. Montgomery +10 more

Author Response: The gene expression landscape of the human locus coeruleus revealed by single-nucleus and spatially-resolved transcriptomics

(2023)10.7554/elife.84628.2.sa4

N/A

0DataRank · unranked

0 citations

Heena R. Divecha, Matthew N. Tran, Sang Ho Kwon, Abby Spangler, Kelsey D. Montgomery +10 more

Variation in TAF1 expression in female carrier induced pluripotent stem cells and human brain ontogeny has implications for adult neostriatum vulnerability in X-linked Dystonia Parkinsonism

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.26.485862

N/A

0DataRank · unranked

0 citations

Ricardo S. Jacomini, Bareera Qamar, Kynon JM Benjamin, Ria Arora, Tomoyo Sawada +11 more

Expression bias in retinoic acid responsive genes defines variations in neural differentiation of human pluripotent stem cells

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.17.435870

N/A

0DataRank · unranked

0 citations

Seungmae Seo, Genevieve L. Stein-O’Brien, Amritha Jaishankar, Kazuya Ogawa, Nicola Micali +18 more

BDNF-DT and BDNF-AS-DT : Novel Genes in the BDNF locus

medRxiv(2025)10.1101/2025.07.10.25331311

N/A

0DataRank · unranked

0 citations

Giovanna Punzi, Nuri E. Smith, Sreya Mukherjee, Joo Heon Shin, Qiang Chen +10 more

scMeFormer: a transformer-based deep learning model for imputing DNA methylation states in single cells enhances the detection of epigenetic alterations in schizophrenia

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.25.577200

N/A

0DataRank · unranked

0 citations

Chongyuan Luo, Hanqing Liu, Matthew G. Heffel, Richard E. Straub, Joel E. Kleinman +5 more

Deep learning imputes DNA methylation states in single cells and enhances the detection of epigenetic alterations in schizophrenia

Cell Genomics(2025)10.1016/j.xgen.2025.100774

N/A

0DataRank · unranked

8 citations

Chongyuan Luo, Hanqing Liu, Matthew G. Heffel, Richard E. Straub, Joel E. Kleinman +5 more

Lower cortical FKBP5 DNA methylation at key enhancer sites is associated with older age and higher gene expression in schizophrenia

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.28.635384

N/A

0DataRank · unranked

0 citations

Dominic Kaul, Natan Yusupov, Maik Ködel, Susann Sauer, Anna S. Fröhlich +8 more

Comparative molecular landscapes of immature neurons in the mammalian dentate gyrus across species reveal special features in humans

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.16.638557

N/A

0DataRank · unranked

0 citations

Yijing Su, Qian Yang, Jiaqi Li, Hong Yan, Taosha Gao +24 more

Thomas M. Hyde

Indexed papers

Top data-sharing exemplar

Papers