Kalyani Dhusia

Biochemistry, Genetics and Molecular BiologyComputer ScienceImmunology and MicrobiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 16 papers. Top paper: “A structural-based machine learning method to classify binding affinities between TCR and peptide-MHC complexes”.

A structural-based machine learning method to classify binding affinities between TCR and peptide-MHC complexes

Molecular Immunology(2021)10.1016/j.molimm.2021.07.020

N/A

0.434DataRank · unranked

17 citations

Zhaoqian Su, Yinghao Wu, Kalyani Dhusia

A computational study of co-inhibitory immune complex assembly at the interface between T cells and antigen presenting cells

PLoS Computational Biology(2021)10.1371/journal.pcbi.1008825

N/A

0.208DataRank · unranked

3 citations

Kalyani Dhusia, Yinghao Wu, Zhaoqian Su

Mechanistic dissection of spatial organization in NF-κB signaling pathways by hybrid simulations

Integrative Biology(2021)10.1093/intbio/zyab006

N/A

0.104DataRank · unranked

1 citations

Kalyani Dhusia, Zhaoqian Su, Yinghao Wu

Coarse-grained simulations of phase separation driven by DNA and its sensor protein cGAS

Archives of Biochemistry and Biophysics(2021)10.1016/j.abb.2021.109001

N/A

0DataRank · unranked

11 citations

Kalyani Dhusia, Yinghao Wu, Zhaoqian Su

Understanding the impacts of cellular environments on ligand binding of membrane receptors by computational simulations

The Journal of Chemical Physics(2021)10.1063/5.0035970

N/A

0DataRank · unranked

6 citations

Kalyani Dhusia, Yinghao Wu, Zhaoqian Su

Bioengineering of Genetically Encoded Gene Promoter Repressed by the Flavonoid Apigenin for Constructing Intracellular Sensor for Molecular Events

Biosensors(2021)10.3390/bios11050137

N/A

0DataRank · unranked

3 citations

Kalyani Dhusia, Wenjie Qi, Andrea I. Doseff, Sudin Bhattacharya, Assaf A. Gilad +1 more

Classification of protein–protein association rates based on biophysical informatics

BMC Bioinformatics(2021)10.1186/s12859-021-04323-0

N/A

0DataRank · unranked

2 citations

Yinghao Wu, Kalyani Dhusia

Bioengineering of genetically encoded gene promoter repressed by flavonoids for constructing intracellular sensor for molecular events

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.17.431641

N/A

0DataRank · unranked

0 citations

Kalyani Dhusia, Wenjie Qi, Andrea I. Doseff, Sudin Bhattacharya, Assaf A. Gilad +1 more

Understanding the functional role of membrane confinements in TNF-mediated signaling by multiscale simulations

Communications Biology(2022)10.1038/s42003-022-03179-1

N/A

0DataRank · unranked

20 citations

Kalyani Dhusia, Yinghao Wu, Zhaoqian Su

proteoDA: a package for quantitative proteomics

The Journal of Open Source Software(2023)10.21105/joss.05184

N/A

0DataRank · unranked

63 citations

Charity L. Washam, Duah Alkam, Jordan T. Bird, Allen Gies, Kalyani Dhusia +3 more

Computational analyses of the interactome between TNF and TNFR superfamilies

Computational Biology and Chemistry(2023)10.1016/j.compbiolchem.2023.107823

N/A

0DataRank · unranked

5 citations

Zhaoqian Su, Yinghao Wu, Kalyani Dhusia

Encoding the Space of Protein-protein Binding Interfaces by Artificial Intelligence

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.08.556812

N/A

0DataRank · unranked

0 citations

Kalyani Dhusia, Yinghao Wu, Zhaoqian Su

Understanding the Impacts of Conformational Dynamics on the Regulation of Protein–Protein Association by a Multiscale Simulation Method

Journal of Chemical Theory and Computation(2020)10.1021/acs.jctc.0c00439

N/A

0DataRank · unranked

8 citations

Zhaoqian Su, Yinghao Wu, Kalyani Dhusia

Encoding the space of protein-protein binding interfaces by artificial intelligence

Computational Biology and Chemistry(2024)10.1016/j.compbiolchem.2024.108080

N/A

0DataRank · unranked

2 citations

Kalyani Dhusia, Yinghao Wu, Zhaoqian Su

Using Coarse-Grained Simulations to Characterize the Mechanisms of Protein–Protein Association

Biomolecules(2020)10.3390/biom10071056

N/A

0DataRank · unranked

9 citations

Zhaoqian Su, Yinghao Wu, Kalyani Dhusia

Mechanistic Dissection of Spatial Organization in NF-κB Signaling Pathways by Hybrid Simulations

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.11.378331

N/A

0DataRank · unranked

0 citations

Kalyani Dhusia, Zhaoqian Su, Yinghao Wu