Andrew L. Ferguson

Biochemistry, Genetics and Molecular BiologyMaterials ScienceEngineering

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 14 papers. Top paper: “The value of antimicrobial peptides in the age of resistance”.

The value of antimicrobial peptides in the age of resistance

The Lancet Infectious Diseases(2020)10.1016/s1473-3099(20)30327-3

N/A

1.0DataRank · unranked

1075 citations

Pushpanathan Muthuirulan, Ana L. Santos, Leon G. Leanse, Michael Fernández, Anastasios Ioannidis +14 more

PACAP is a pathogen-inducible resident antimicrobial neuropeptide affording rapid and contextual molecular host defense of the brain

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.1917623117

N/A

0DataRank · unranked

59 citations

Liana C. Chan, Huiyuan Wang, Juelline Lieng, Mandy Hung, Yashes Srinivasan +8 more

Deep learning-enabled design of synthetic orthologs of a signaling protein

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.21.521443

N/A

0DataRank · unranked

12 citations

Niksa Praljak, Subu Subramanian, Sarah Wasinger, Rama Ranganathan, Andrew L. Ferguson +1 more

Disruption of energetic and dynamic base pairing cooperativity in DNA duplexes by an abasic site

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2219124120

N/A

0DataRank · unranked

21 citations

Michael S. Jones, Andrew L. Ferguson, Andrei Tokmakoff, Brennan Ashwood

Thermodynamics and kinetics of DNA and RNA dinucleotide hybridization to gaps and overhangs

Biophysical Journal(2023)10.1016/j.bpj.2023.07.009

N/A

0DataRank · unranked

20 citations

Michael S. Jones, Aleksandar Radakovic, Smayan Khanna, Yumin Lee, Joseph R. Sachleben +4 more

ProtWave-VAE: Integrating Autoregressive Sampling with Latent-Based Inference for Data-Driven Protein Design

ACS Synthetic Biology(2023)10.1021/acssynbio.3c00261

N/A

0DataRank · unranked

16 citations

Xinran Lian, Rama Ranganathan, Andrew L. Ferguson, Niksa Praljak

Data-driven discovery of innate immunomodulators via machine learning-guided high throughput screening

Chemical Science(2023)10.1039/d3sc03613h

N/A

0DataRank · unranked

14 citations

Jeremiah Kim, Carman KM IP, Azadeh Bahmani, Qing Chen, Matthew G. Rosenberger +3 more

Molecular insight into how the position of an abasic site modifies DNA duplex stability and dynamics

Biophysical Journal(2023)10.1016/j.bpj.2023.11.022

N/A

0DataRank · unranked

10 citations

Michael S. Jones, Yumin Lee, Joseph R. Sachleben, Andrew L. Ferguson, Andrei Tokmakoff +1 more

Direct monitoring of the thermodynamics and kinetics of DNA and RNA dinucleotide dehybridization from gaps and overhangs

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.10.536266

N/A

0DataRank · unranked

2 citations

Michael S. Jones, Aleksandar Radakovic, Smayan Khanna, Yumin Lee, Joseph R. Sachleben +4 more

ProtWave-VAE: Integrating autoregressive sampling with latent-based inference for data-driven protein design

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.23.537971

N/A

0DataRank · unranked

2 citations

Xinran Lian, Rama Ranganathan, Andrew L. Ferguson, Niksa Praljak

Data-driven discovery of innate immunomodulators via machine learning-guided high throughput screening

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.26.546393

N/A

0DataRank · unranked

1 citations

Jeremiah Kim, Carman KM IP, Azadeh Bahmani, Qing Chen, Matthew G. Rosenberger +3 more

Molecular insight into how the position of an abasic site and its sequence environment influence DNA duplex stability and dynamics

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.22.550182

N/A

0DataRank · unranked

1 citations

Michael S. Jones, Yumin Lee, Joseph R. Sachleben, Andrew L. Ferguson, Andrei Tokmakoff +1 more

Deep-learning-based design of synthetic orthologs of SH3 signaling domains

Cell Systems(2024)10.1016/j.cels.2024.07.005

N/A

0DataRank · unranked

8 citations

Niksa Praljak, Subu Subramanian, Sarah Wasinger, Rama Ranganathan, Andrew L. Ferguson +1 more

Data-driven equation-free dynamics applied to many-protein complexes: The microtubule tip relaxation

Biophysical Journal(2025)10.1016/j.bpj.2025.01.009

N/A

0DataRank · unranked

6 citations

Siva Dasetty, Daniel Beckett, Yihang Wang, Weizhi Xue, Tomasz Skóra +4 more