🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Duncan MacCannell

National Center for Emerging and Zoonotic Infectious Diseases

ORCID: 0000-0002-8869-1840
MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 6%percentile
0.303Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Putting everything in its place: using the INSDC compliant Pathogen Data Object Model to better structure genomic data submitted for public health applications

Microbial Genomics(2023)10.1099/mgen.0.001145
Top 55%
0.303DataRank
Top 55%6 citations

Ilene Karsch‐Mizrachi, Zahra Waheed, Masanori Arita, Duncan MacCannell, Finlay Maguire +19 more

Papers

Driven by 13 papers — median percentile 45. Top paper: “Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California”.

Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California

Science(2020)10.1126/science.abb9263
N/A
13.4DataRank · unranked
308 citations

Wei Gu, Scot Federman, Louis du Plessis, Oliver Pybus, Nuno R. Faria +45 more

SARS-CoV-2 Variants of Interest and Concern naming scheme conducive for global discourse

Nature Microbiology(2021)10.1038/s41564-021-00932-w
N/A
0.863DataRank · unranked
315 citations

Mark D. Perkins, Jens H. Kuhn, Mark J. Pallen, Erik Alm, Brett N. Archer +42 more

STROBE-metagenomics: a STROBE extension statement to guide the reporting of metagenomics studies

The Lancet Infectious Diseases(2020)10.1016/s1473-3099(20)30199-7
N/A
0.646DataRank · unranked
73 citations

Clarissa Oeser, François Balloux, Julianne R. Brown, Ellen C. Carbo, André Charlett +22 more

hAMRonization: Enhancing antimicrobial resistance prediction using the PHA4GE AMR detection specification and tooling

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.07.583950
N/A
0.470DataRank · unranked
22 citations

Emma Griffiths, Alex Manuele, Daniel Fornika, Simon H. Tausch, Thanh Le-Viet +36 more

Putting everything in its place: using the INSDC compliant Pathogen Data Object Model to better structure genomic data submitted for public health applications

Microbial Genomics(2023)10.1099/mgen.0.001145
Top 55%
0.303DataRank
Top 55%6 citations

Ilene Karsch‐Mizrachi, Zahra Waheed, Masanori Arita, Duncan MacCannell, Finlay Maguire +19 more

Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package

GigaScience(2022)10.1093/gigascience/giac003
N/A
0DataRank · unranked
46 citations

Ruth Timme, Catarina Inês Mendes, Andrew J. Page, Nabil-Fareed Alikhan, Daniel Fornika +28 more

PHA4GE quality control contextual data tags: standardized annotations for sharing public health sequence datasets with known quality issues to facilitate testing and training

Microbial Genomics(2024)10.1099/mgen.0.001260
N/A
0DataRank · unranked
5 citations

Catarina Inês Mendes, Finlay Maguire, Jennifer L. Guthrie, Bryan A. Wee, Sarah E. Schmedes +18 more

Cryptic transmission of SARS-CoV-2 in Washington state

Science(2020)10.1126/science.abc0523
N/A
0DataRank · unranked
329 citations

Alexander L. Greninger, Pavitra Roychoudhury, Lea M. Starita, Michael Famulare, Meei‐Li Huang +62 more

A framework towards implementation of sequencing for antimicrobial-resistant and other health-care-associated pathogens

The Lancet Infectious Diseases(2025)10.1016/s1473-3099(24)00729-1
N/A
0DataRank · unranked
6 citations

Amy J. Mathers, Timothy R. Walsh, W. Zingg, Iruka N. Okeke, L. Clifford McDonald +41 more

Ten recommendations for supporting open pathogen genomic analysis in public health

Nature Medicine(2020)10.1038/s41591-020-0935-z
N/A
0DataRank · unranked
122 citations

Duncan MacCannell, Thomas R. Sibley, Trevor Bedford, Allison Black

Cryptic transmission of SARS-CoV-2 in Washington State

medRxiv(2020)10.1101/2020.04.02.20051417
N/A
0DataRank · unranked
86 citations

Alexander L. Greninger, Pavitra Roychoudhury, Lea M. Starita, Michael Famulare, Meei‐Li Huang +52 more

A Genomic Survey of SARS-CoV-2 Reveals Multiple Introductions into Northern California without a Predominant Lineage

medRxiv(2020)10.1101/2020.03.27.20044925
N/A
0DataRank · unranked
36 citations

Wei Gu, Scot Federman, Louis du Plessis, Oliver Pybus, Nuno R. Faria +43 more

Ten Recommendations for Supporting Open Pathogen Genomic Analysis in Public Health Settings

Preprints.org(2020)10.20944/preprints202001.0107.v1
N/A
0DataRank · unranked
4 citations

Duncan MacCannell, Thomas R. Sibley, Trevor Bedford, Allison Black