🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Viet Hoang Man

University of Pittsburgh

ORCID: 0000-0002-8907-6479

Also affiliated with Genomics (United Kingdom)

Biochemistry, Genetics and Molecular BiologyComputer ScienceMedicineMaterials SciencePhysics and Astronomy

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

0in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 18 papers. Top paper: “Nonequilibrium molecular dynamics simulations of infrared laser-induced dissociation of a tetrameric Aβ42 β-barrel in a neuronal membrane model”.

Nonequilibrium molecular dynamics simulations of infrared laser-induced dissociation of a tetrameric Aβ42 β-barrel in a neuronal membrane model

Chemistry and Physics of Lipids(2020)10.1016/j.chemphyslip.2020.105030
N/A
0DataRank · unranked
2 citations

Junmei Wang, Philippe Derreumaux, Phuong H. Nguyen, Viet Hoang Man

Recent progress in general force fields of small molecules

Current Opinion in Structural Biology(2021)10.1016/j.sbi.2021.11.011
N/A
0DataRank · unranked
55 citations

Brandon Walker, Viet Hoang Man, Pengyu Ren, Junmei Wang, Xibing He

Machine learning on ligand-residue interaction profiles to significantly improve binding affinity prediction

Briefings in Bioinformatics(2021)10.1093/bib/bbab054
N/A
0DataRank · unranked
35 citations

Xibing He, Jingchen Zhai, Yuzhao Zhang, Viet Hoang Man, Junmei Wang +1 more

In silico binding profile characterization of SARS-CoV-2 spike protein and its mutants bound to human ACE2 receptor

Briefings in Bioinformatics(2021)10.1093/bib/bbab188
N/A
0DataRank · unranked
26 citations

Xibing He, Jingchen Zhai, Beihong Ji, Viet Hoang Man, Junmei Wang +1 more

Molecular conformations and dynamics of nucleotide repeats associated with neurodegenerative diseases: double helices and CAG hairpin loops

Computational and Structural Biotechnology Journal(2021)10.1016/j.csbj.2021.04.037
N/A
0DataRank · unranked
19 citations

Yuan Zhang, Pengning Xu, Viet Hoang Man, Christopher Roland, Keith Weninger +2 more

Incorporating structural similarity into a scoring function to enhance the prediction of binding affinities

Journal of Cheminformatics(2021)10.1186/s13321-021-00493-4
N/A
0DataRank · unranked
6 citations

Xibing He, Yuzhao Zhang, Jingchen Zhai, Viet Hoang Man, Shuhan Liu +2 more

Binding Profile Assessment of N501Y: a More Infectious Mutation on the Receptor Binding Domain of SARS-CoV-2 Spike Protein

ChemRxiv(2021)10.26434/chemrxiv.13710961.v1
N/A
0DataRank · unranked
1 citations

Xibing He, Viet Hoang Man, Jingchen Zhai, Beihong Ji, Junmei Wang +1 more

Binding Profile Assessment of N501Y: a More Infectious Mutation on the Receptor Binding Domain of SARS-CoV-2 Spike Protein

ChemRxiv(2021)10.26434/chemrxiv.13710961.v2
N/A
0DataRank · unranked
1 citations

Xibing He, Viet Hoang Man, Jingchen Zhai, Beihong Ji, Junmei Wang +1 more

Binding Profile Assessment of N501Y: a More Infectious Mutation on the Receptor Binding Domain of SARS-CoV-2 Spike Protein

ChemRxiv(2021)10.26434/chemrxiv.13710961
N/A
0DataRank · unranked
1 citations

Xibing He, Viet Hoang Man, Jingchen Zhai, Beihong Ji, Junmei Wang +1 more

Elastic moduli of normal and cancer cell membranes revealed by molecular dynamics simulations

Physical Chemistry Chemical Physics(2022)10.1039/d1cp04836h
N/A
0DataRank · unranked
26 citations

Viet Hoang Man, Mai Suan Li, Philippe Derreumaux, Junmei Wang, Phuong H. Nguyen +1 more

Investigation of the Structure of Full-Length Tau Proteins with Coarse-Grained and All-Atom Molecular Dynamics Simulations

ACS Chemical Neuroscience(2022)10.1021/acschemneuro.2c00381
N/A
0DataRank · unranked
15 citations

Viet Hoang Man, Jie Gao, Junmei Wang, Xibing He

Stable Cavitation Interferes with Aβ16–22 Oligomerization

Journal of Chemical Information and Modeling(2022)10.1021/acs.jcim.2c00764
N/A
0DataRank · unranked
7 citations

Xibing He, Junmei Wang, Viet Hoang Man

Joint Computational/Cell-Based Approach for Screening Inhibitors of Tau Oligomerization: A Proof-of-Concept Study

Journal of Alzheimer s Disease(2022)10.3233/jad-220450
N/A
0DataRank · unranked
4 citations

Da Lin, Xibing He, Jie Gao, Junmei Wang, Viet Hoang Man

Comparison and summary of in silico prediction tools for CYP450-mediated drug metabolism

Drug Discovery Today(2023)10.1016/j.drudis.2023.103728
N/A
0DataRank · unranked
37 citations

Viet Hoang Man, Beihong Ji, Lianjin Cai, Junmei Wang, Jingchen Zhai

Development and test of highly accurate endpoint free energy methods. 2: Prediction of logarithm of n‐octanol–water partition coefficient (logP) for druglike molecules using MM‐PBSA method

Journal of Computational Chemistry(2023)10.1002/jcc.27086
N/A
0DataRank · unranked
30 citations

Tingjun Hou, Xibing He, Viet Hoang Man, Junmei Wang, Yuchen Sun

Unpolarized laser method for infrared spectrum calculation of amide I C O bonds in proteins using molecular dynamics simulation

Computers in Biology and Medicine(2023)10.1016/j.compbiomed.2023.106902
N/A
0DataRank · unranked
5 citations

Xibing He, Phuong H. Nguyen, Celeste Sagui, Christopher Roland, Xiang‐Qun Xie +2 more

Effects of All-Atom and Coarse-Grained Molecular Mechanics Force Fields on Amyloid Peptide Assembly: The Case of a Tau K18 Monomer

Journal of Chemical Information and Modeling(2024)10.1021/acs.jcim.4c01448
N/A
0DataRank · unranked
2 citations

Viet Hoang Man, Jie Gao, Junmei Wang, Xibing He

Aberrant S293 Phosphorylation Drives Oligomerization of Tau Repeat R2: Insights from Molecular Dynamics Simulations

ACS Chemical Neuroscience(2025)10.1021/acschemneuro.5c00734
N/A
0DataRank · unranked
0 citations

Xibing He, Phuong H. Nguyen, Jie Gao, Junmei Wang, Viet Hoang Man