🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Julien Gagneur

Helmholtz Zentrum München

ORCID: 0000-0002-8924-8365

Also affiliated with Technical University of Munich

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 5%percentile
0.382Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Aberrant splicing prediction across human tissues

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.13.495326
Top 47%
0.382DataRank
Top 47%8 citations

Nils Wagner, Florian R. Hölzlwimmer, Vicente A. Yépez, Christian Mertes, Holger Prokisch +2 more

Papers

Driven by 14 papers — median percentile 53. Top paper: “Transcriptome-directed analysis for Mendelian disease diagnosis overcomes limitations of conventional genomic testing”.

Transcriptome-directed analysis for Mendelian disease diagnosis overcomes limitations of conventional genomic testing

Journal of Clinical Investigation(2020)10.1172/jci141500
N/A
0.788DataRank · unranked
190 citations

Hongzheng Dai, Lindsay C. Burrage, Jill A. Rosenfeld, Shamika Ketkar, Michaela Müller +13 more

Nucleotide dependency analysis of DNA language models reveals genomic functional elements

10.1101/2024.07.27.605418
N/A
0.396DataRank · unranked
13 citations

Alexander Karollus, Johannes Hingerl, Gihanna Galindez, Nils Wagner, Xavier Hernandez‐Alias +3 more

Aberrant splicing prediction across human tissues

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.13.495326
Top 47%
0.382DataRank
Top 47%8 citations

Nils Wagner, Florian R. Hölzlwimmer, Vicente A. Yépez, Christian Mertes, Holger Prokisch +2 more

Distinct genetic liability profiles define clinically relevant patient strata across common diseases

medRxiv(2023)10.1101/2023.05.10.23289788
N/A
0.208DataRank · unranked
3 citations

Sylvain Moser, Laura T. Jiménez-Barrón, Till F. M. Andlauer, Moritz von Scheidt, Monika Budde +14 more

Cellular energy regulates mRNA translation and degradation in a codon-specific manner

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.06.535836
N/A
0.104DataRank · unranked
1 citations

Yujie Zhang, Evangelos Theodorakis, Laura D. Martens, Vicente A. Yépez, Vicent Pelechano +2 more

Aberrant splicing prediction across human tissues

Nature Genetics(2023)10.1038/s41588-023-01373-3
N/A
0DataRank · unranked
95 citations

Muhammed Hasan Çelik, Florian R. Hölzlwimmer, Christian Mertes, Holger Prokisch, Vicente A. Yépez +2 more

Improved detection of aberrant splicing with FRASER 2.0 and the intron Jaccard index

The American Journal of Human Genetics(2023)10.1016/j.ajhg.2023.10.014
N/A
0DataRank · unranked
56 citations

Karoline Lutz, Christian Mertes, Vicente A. Yépez, Julien Gagneur, Ines F. Scheller

Impaired biogenesis of basic proteins impacts multiple hallmarks of the aging brain

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.20.549210
N/A
0DataRank · unranked
13 citations

Antonio Marino, Jae Ho Lee, Erika Kelmer Sacramento, Mario Baumgart, Sara Bagnoli +10 more

Cellular energy regulates mRNA degradation in a codon-specific manner

Molecular Systems Biology(2024)10.1038/s44320-024-00026-9
N/A
0DataRank · unranked
7 citations

Yujie Zhang, Evangelos Theodorakis, Laura D. Martens, Vicente A. Yépez, Vicent Pelechano +2 more

Aberrant splicing prediction during human organ development

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.16.665183
N/A
0DataRank · unranked
0 citations

Александр Неверов, Alexandra C Martin-Geary, Shubhankar Londhe, Carina Schröder, Vicente A. Yépez +3 more

Detection of aberrant splicing events in RNA-seq data using FRASER

Nature Communications(2021)10.1038/s41467-020-20573-7
N/A
0DataRank · unranked
181 citations

Ines F. Scheller, Vicente A. Yépez, Muhammed Hasan Çelik, Yingjiqiong Liang, Laura S. Kremer +4 more

Base-resolution models of transcription-factor binding reveal soft motif syntax

Nature Genetics(2021)10.1038/s41588-021-00782-6
N/A
0DataRank · unranked
702 citations

Melanie Weilert, Avanti Shrikumar, Sabrina Krueger, Amr M. Alexandari, Khyati Dalal +6 more

Clinical implementation of RNA sequencing for Mendelian disease diagnostics

medRxiv(2021)10.1101/2021.04.01.21254633
N/A
0DataRank · unranked
33 citations

Mirjana Gušić, Robert Kopajtich, Christian Mertes, Nicholas H. Smith, Charlotte L. Alston +48 more

Partitioning RNAs by length improves transcriptome reconstruction from short-read RNA-seq data

Nature Biotechnology(2022)10.1038/s41587-021-01136-7
N/A
0DataRank · unranked
13 citations

Shounak Chakraborty, Caroline Vissers, Derek Reiman, Akshay M. Patel, Ki-Heon Lee +11 more