Louis Vaickus

Also affiliated with Dartmouth Institute for Health Policy and Clinical Practice, Dartmouth–Hitchcock Medical Center, Dartmouth Psychiatric Research Center, Dartmouth Hospital, Dartmouth Health

Computer ScienceBiochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 40 papers. Top paper: “Large‐scale validation study of an improved semiautonomous urine cytology assessment tool: AutoParis‐X”.

Large‐scale validation study of an improved semiautonomous urine cytology assessment tool: AutoParis‐X

Cancer Cytopathology(2023)10.1002/cncy.22732

N/A

0.736DataRank · unranked

16 citations

Natt Chan, Jonathan D. Marotti, Darcy A. Kerr, Edward J. Gutmann, Ryan Glass +6 more

A deep learning algorithm to detect cutaneous squamous cell carcinoma on frozen sections in Mohs micrographic surgery: A retrospective assessment

Experimental Dermatology(2023)10.1111/exd.14949

N/A

0.651DataRank · unranked

11 citations

Gokul Raghavendra Srinivasan, Rachael Chacko, Sophie Chen, Anish Suvarna, Louis Vaickus +9 more

Intraoperative margin assessment for basal cell carcinoma with deep learning and histologic tumor mapping to surgical site

npj Precision Oncology(2024)10.1038/s41698-023-00477-7

N/A

0.591DataRank · unranked

15 citations

Matthew Davis, Rachael Chacko, Michael J. Davis, Lucy Fu, Tarushii Goel +10 more

Using Satellite Images and Deep Learning to Identify Associations Between County-Level Mortality and Residential Neighborhood Features Proximal to Schools: A Cross-Sectional Study

Frontiers in Public Health(2021)10.3389/fpubh.2021.766707

N/A

0.446DataRank · unranked

7 citations

Rebecca M. Lebeaux, Anne G. Hoen, Brock C. Christensen, Louis Vaickus, Todd A. MacKenzie +1 more

Mixed Effects Machine Learning Models for Colon Cancer Metastasis Prediction using Spatially Localized Immuno-Oncology Markers

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.01.454649

N/A

0.345DataRank · unranked

9 citations

Carly A. Bobak, Mustafa Nasir-Moin, Eren M. Veziroglu, Scott Palisoul, Rachael E. Barney +5 more

The Overlooked Role of Specimen Preparation in Bolstering Deep Learning-Enhanced Spatial Transcriptomics Workflows

medRxiv(2023)10.1101/2023.10.09.23296700

N/A

0.104DataRank · unranked

1 citations

Yunrui Lu, Alos Diallo, Gokul Raghavendra Srinivasan, Zarif Azher, Brock C. Christensen +8 more

MethylSPWNet and MethylCapsNet: Biologically Motivated Organization of DNAm Neural Networks, Inspired by Capsule Networks

npj Systems Biology and Applications(2021)10.1038/s41540-021-00193-7

N/A

0DataRank · unranked

25 citations

Youdinghuan Chen, Nasim Azizgolshani, Curtis L. Petersen, Alexander J. Titus, Erika L. Moen +4 more

Bridge Category Models: Development of Bayesian Modelling Procedures to Account for Bridge Ordinal Ratings for Disease Staging

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.17.456726

N/A

0DataRank · unranked

3 citations

Carly A. Bobak, Nasim Azizgolshani, Michael J. Andersen, Arief A. Suriawinata, Xiaoying Liu +6 more

Large-scale longitudinal comparison of urine cytological classification systems reveals potential early adoption of The Paris System criteria

Journal of the American Society of Cytopathology(2022)10.1016/j.jasc.2022.08.001

N/A

0DataRank · unranked

7 citations

Xiaoying Liu, Jonathan D. Marotti, Darcy A. Kerr, Edward J. Gutmann, Ryan Glass +3 more

Development of biologically interpretable multimodal deep learning model for cancer prognosis prediction

Proceedings of the 37th ACM/SIGAPP Symposium on Applied Computing(2022)10.1145/3477314.3507032

N/A

0DataRank · unranked

16 citations

Louis Vaickus, Lucas A. Salas, Brock C. Christensen, Joshua Levy, Zarif Azher

ArcticAI: A Deep Learning Platform for Rapid and Accurate Histological Assessment of Intraoperative Tumor Margins

medRxiv(2022)10.1101/2022.05.06.22274781

N/A

0DataRank · unranked

8 citations

Matthew Davis, Rachael Chacko, Michael J. Davis, Lucy Fu, Tarushii Goel +8 more

Assessment of Emerging Pretraining Strategies in Interpretable Multimodal Deep Learning for Cancer Prognostication

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.21.517440

N/A

0DataRank · unranked

2 citations

Anish Suvarna, Ji‐Qing Chen, Ze Zhang, Brock C. Christensen, Lucas A. Salas +3 more

Identification of Spatial Proteomic Signatures of Colon Tumor Metastasis: A Digital Spatial Profiling Approach

medRxiv(2022)10.1101/2022.12.04.22283073

N/A

0DataRank · unranked

2 citations

John P. Zavras, Eren M. Veziroglu, Mustafa Nasir-Moin, Fred Kolling, Brock C. Christensen +10 more

Federated Learning for Multicenter Collaborations of Small Biomedical Research Institutions: A Framework for Navigating Challenges and Realizing Opportunities

Zenodo (CERN European Organization for Nuclear Research)(2022)10.5281/zenodo.7368975

N/A

0DataRank · unranked

0 citations

Jeffrey Thompson, Brady Hunt, Arnold Song, Brock C. Christensen, Jason H. Moore +3 more

Inferring Spatially Resolved Transcriptomics Data from Whole Slide Images for the Assessment of Colorectal Tumor Metastasis: A Feasibility Study

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.24.517856

N/A

0DataRank · unranked

0 citations

Eric Feng, Cyril Sharma, Zarif Azher, Tarushii Goel, Ojas A. Ramwala +10 more

Inferring spatial transcriptomics markers from whole slide images to characterize metastasis-related spatial heterogeneity of colorectal tumors: A pilot study

Journal of Pathology Informatics(2023)10.1016/j.jpi.2023.100308

N/A

0DataRank · unranked

23 citations

Eric Feng, Cyril Sharma, Zarif Azher, Tarushii Goel, Ojas A. Ramwala +10 more

Identification of Spatial Proteomic Signatures of Colon Tumor Metastasis

American Journal Of Pathology(2023)10.1016/j.ajpath.2023.02.020

N/A

0DataRank · unranked

21 citations

John P. Zavras, Eren M. Veziroglu, Mustafa Nasir-Moin, Fred Kolling, Brock C. Christensen +10 more

Assessment of emerging pretraining strategies in interpretable multimodal deep learning for cancer prognostication

BioData Mining(2023)10.1186/s13040-023-00338-w

N/A

0DataRank · unranked

19 citations

Anish Suvarna, Jiqing Chen, Ze Zhang, Brock C. Christensen, Lucas A. Salas +3 more

Examining longitudinal markers of bladder cancer recurrence through a semiautonomous machine learning system for quantifying specimen atypia from urine cytology

Cancer Cytopathology(2023)10.1002/cncy.22725

N/A

0DataRank · unranked

14 citations

Natt Chan, Jonathan D. Marotti, Nathalie J. Rodrigues, Abdol Aziz Ould Ismail, Darcy A. Kerr +8 more

Development of an interactive web dashboard to facilitate the reexamination of pathology reports for instances of underbilling of CPT codes

Journal of Pathology Informatics(2023)10.1016/j.jpi.2023.100187

N/A

0DataRank · unranked

7 citations

Yunrui Lu, Shuyang Lu, Uhuru Kamau, Robert Hamilton, Jason R. Pettus +4 more

Potential to Enhance Large Scale Molecular Assessments of Skin Photoaging through Virtual Inference of Spatial Transcriptomics from Routine Staining

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.30.551188

N/A

0DataRank · unranked

7 citations

Matthew Davis, Matthew LeBoeuf, Michael Fatemi, Zarif Azher, Yunrui Lu +12 more

Editorial: Artificial intelligence: applications in clinical medicine

Frontiers in Medical Technology(2023)10.3389/fmedt.2023.1206969

N/A

0DataRank · unranked

6 citations

Emilio Madrigal, Louis Vaickus, Joshua Levy

A deep learning algorithm to detect cutaneous squamous cell carcinoma on frozen sections in Mohs micrographic surgery: a retrospective assessment

medRxiv(2023)10.1101/2023.05.14.23289960

N/A

0DataRank · unranked

5 citations

Gokul Raghavendra Srinivasan, Rachael Chacko, Sophie Chen, Anish Suvarna, Louis Vaickus +9 more

Spatial Omics Driven Crossmodal Pretraining Applied to Graph-based Deep Learning for Cancer Pathology Analysis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.30.551187

N/A

0DataRank · unranked

5 citations

Michael Fatemi, Yunrui Lu, Gokul Raghavendra Srinivasan, Alos Diallo, Brock C. Christensen +7 more

Feasibility of Inferring Spatial Transcriptomics from Single-Cell Histological Patterns for Studying Colon Cancer Tumor Heterogeneity

medRxiv(2023)10.1101/2023.10.09.23296701

N/A

0DataRank · unranked

4 citations

Yunrui Lu, Cyril Sharma, Eric Feng, Zarif Azher, Alos Diallo +12 more

Examining Longitudinal Markers of Bladder Cancer Recurrence Through a Semi-Autonomous Machine Learning System for Quantifying Specimen Atypia from Urine Cytology

medRxiv(2023)10.1101/2023.03.02.23286716

N/A

0DataRank · unranked

1 citations

Natt Chan, Jonathan D. Marotti, Nathalie J. Rodrigues, Abdol Aziz Ould Ismail, Darcy A. Kerr +8 more

Evaluation of a Deep Neural Network for Automated Classification of Colorectal Polyps on Histopathologic Slides

UNC Libraries(2023)10.17615/1ssa-5h17

N/A

0DataRank · unranked

0 citations

Albert S. Kim, Arief A. Suriawinata, Dale C. Snover, Behnaz Abdollahi, Bing Ren +8 more

An initial game-theoretic assessment of enhanced tissue preparation and imaging protocols for improved deep learning inference of spatial transcriptomics from tissue morphology

Briefings in Bioinformatics(2024)10.1093/bib/bbae476

N/A

0DataRank · unranked

8 citations

Yunrui Lu, Alos Diallo, Gokul Raghavendra Srinivasan, Zarif Azher, Brock C. Christensen +8 more

Integrative co-registration of elemental imaging and histopathology for enhanced spatial multimodal analysis of tissue sections through TRACE

Bioinformatics Advances(2024)10.1093/bioadv/vbaf001

N/A

0DataRank · unranked

2 citations

Serin Han, Aruesha Srivastava, Neha Shaik, Matthew Chan, Alos Diallo +15 more

Integrative Co-Registration of Elemental Imaging and Histopathology for Enhanced Spatial Multimodal Analysis of Tissue Sections through TRACE

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.06.583819

N/A

0DataRank · unranked

1 citations

Ramsey Steiner, Serin Han, Aruesha Srivastava, Neha Shaik, Matthew Chan +10 more

Association of deep learning-derived histologic features of placental chorionic villi with maternal and infant characteristics in the New Hampshire birth cohort study

Placenta(2025)10.1016/j.placenta.2025.07.084

N/A

0DataRank · unranked

1 citations

Gokul Srinivasan, Caitlin G. Howe, Edward Zhang, Catherine Jeon, Gnan Suchir Gupta Paruchuri +20 more

Integration of elemental imaging and spatial transcriptomic profiling for proof-of-concept metals-based pathway analysis of colon tumor microenvironment

Metallomics(2025)10.1093/mtomcs/mfaf034

N/A

0DataRank · unranked

1 citations

Neha Shaik, Yunrui Lu, Matthew Chan, Alos Diallo, John P. Zavras +15 more

Histology-Based Virtual RNA Inference Identifies Pathways Associated with Metastasis Risk in Colorectal Cancer

medRxiv(2025)10.1101/2025.04.22.25326170

N/A

0DataRank · unranked

1 citations

Minh‐Khang Le, Zarif Azher, Xiaoying Liu, Louis Vaickus, Harsimran Kaur +7 more

Evaluation of a Deep Neural Network for Automated Classification of Colorectal Polyps on Histopathologic Slides

JAMA Network Open(2020)10.1001/jamanetworkopen.2020.3398

N/A

0DataRank · unranked

111 citations

Arief A. Suriawinata, Louis Vaickus, Bing Ren, Xiaoying Liu, Mikhail Lisovsky +8 more

Histology-Based Virtual RNA Inference Identifies Pathways Associated With Metastasis Risk in Colorectal Cancer

Modern Pathology(2025)10.1016/j.modpat.2025.100866

N/A

0DataRank · unranked

0 citations

Minh‐Khang Le, Zarif Azher, Xiaoying Liu, Louis Vaickus, Harsimran Kaur +7 more

A large-scale internal validation study of unsupervised virtual trichrome staining technologies on nonalcoholic steatohepatitis liver biopsies

Modern Pathology(2020)10.1038/s41379-020-00718-1

N/A

0DataRank · unranked

52 citations

Nasim Azizgolshani, Michael J. Andersen, Arief A. Suriawinata, Xiaoying Liu, Mikhail Lisovsky +5 more

PathFlow-MixMatch for Whole Slide Image Registration: An Investigation of a Segment-Based Scalable Image Registration Method

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.22.002402

N/A

0DataRank · unranked

9 citations

Christopher R. Jackson, Christian C. Haudenschild, Brock C. Christensen, Louis Vaickus, Joshua Levy

A Large-Scale Internal Validation Study of Unsupervised Virtual Trichrome Staining Technologies on Non-alcoholic Steatohepatitis Liver Biopsies

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.03.187237

N/A

0DataRank · unranked

4 citations

Nasim Azizgolshani, Michael J. Andersen, Arief A. Suriawinata, Xiaoying Liu, Mikhail Lisovsky +5 more

MethylSPWNet and MethylCapsNet: Biologically Motivated Organization of DNAm Neural Network, Inspired by Capsule Networks

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.14.251306

N/A

0DataRank · unranked

2 citations

Youdinghuan Chen, Nasim Azizgolshani, Curtis L. Petersen, Alexander J. Titus, Erika L. Moen +4 more

Using Satellite Images and Deep Learning to Identify Associations Between County-Level Mortality and Residential Neighborhood Features Proximal to Schools: A Cross-Sectional Study

medRxiv(2020)10.1101/2020.10.12.20211755

N/A

0DataRank · unranked

1 citations

Rebecca M. Lebeaux, Anne G. Hoen, Brock C. Christensen, Louis Vaickus, Todd A. MacKenzie +1 more