Reuben S. Harris

Also affiliated with The University of Texas at San Antonio Health Science Center

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 41 papers. Top paper: “The role of APOBEC3B in lung tumor evolution and targeted cancer therapy resistance”.

The role of APOBEC3B in lung tumor evolution and targeted cancer therapy resistance

Nature Genetics(2023)10.1038/s41588-023-01592-8

N/A

1.9DataRank · unranked

88 citations

Philippe Gui, Manasi K. Mayekar, Emily K. Law, Oriol Pich, Chris Bailey +80 more

Evidence for virus-mediated oncogenesis in bladder cancers arising in solid organ transplant recipients

eLife(2023)10.7554/elife.82690

N/A

0.929DataRank · unranked

32 citations

Kelly J. Yu, Yelena Golubeva, Petra H. Lenz, Mary L. Piaskowski, David Petersen +15 more

TP53/p53 Facilitates Stress-Induced Exosome and Protein Secretion by Adipocytes

Diabetes(2023)10.2337/db22-1027

N/A

0.696DataRank · unranked

15 citations

Ann V. Hertzel, Shayla R. Fish, Catherine L. Halley, Ellie K. Bohm, Héctor Martínez +6 more

Targeted cancer therapy induces APOBEC fuelling the evolution of drug resistance

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.18.423280

N/A

0DataRank · unranked

19 citations

Deborah R. Caswell, Natalie I. Vokes, Emily K. Law, Wei Wu, William Hill +43 more

The Interaction between AID and CIB1 Is Nonessential for Antibody Gene Diversification by Gene Conversion or Class Switch Recombination

UNC Libraries(2020)10.17615/cst7-wv34

N/A

0DataRank · unranked

0 citations

William Brown, Zachary L. Demorest, Scott G. Morham, Donna A. MacDuff, Reuben S. Harris +1 more

Induction of APOBEC3 Exacerbates DNA Replication Stress and Chromosomal Instability in Early Breast and Lung Cancer Evolution

Cancer Discovery(2021)10.1158/2159-8290.cd-20-0725

N/A

0DataRank · unranked

143 citations

Mihaela Angelova, Clare Puttick, Hao-Ran Zhai, Deborah R. Caswell, Wei-Ting Lu +41 more

Small Molecule Inhibitors of Activation-Induced Deaminase Decrease Class Switch Recombination in B Cells

ACS Pharmacology & Translational Science(2021)10.1021/acsptsci.1c00064

N/A

0DataRank · unranked

12 citations

Adam Yasgar, Robert W. Maul, Amanda E. Rieffer, Daniel Crawford, Daniel J. Salamango +10 more

Comprehensive analysis of clustered mutations in cancer reveals recurrent APOBEC3 mutagenesis of ecDNA

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.27.445689

N/A

0DataRank · unranked

4 citations

Jens Luebeck, Mia Petljak, Vineet Bafna, Paul S. Mischel, Reuben S. Harris +2 more

Evidence for Virus-Mediated Oncogenesis in Bladder Cancers Arising in Solid Organ Transplant Recipients

medRxiv(2021)10.1101/2021.11.11.21266080

N/A

0DataRank · unranked

4 citations

Kelly J. Yu, Yelena Golubeva, Petra H. Lenz, Mary L. Piaskowski, David Petersen +15 more

Mapping clustered mutations in cancer reveals APOBEC3 mutagenesis of ecDNA

Nature(2022)10.1038/s41586-022-04398-6

N/A

0DataRank · unranked

168 citations

Jens Luebeck, Mia Petljak, Azhar Khandekar, Mark Barnes, Tongwu Zhang +8 more

Evidence linking APOBEC3B genesis and evolution of innate immune antagonism by gamma-herpesvirus ribonucleotide reductases

eLife(2022)10.7554/elife.83893

N/A

0DataRank · unranked

23 citations

Jordan T. Becker, Seyed Arad Moghadasi, Nadine M. Shaban, Ashley A. Auerbach, Adam Z. Cheng +2 more

Gain-of-Signal Assays for Probing Inhibition of SARS-CoV-2 M pro /3CL pro in Living Cells

mBio(2022)10.1128/mbio.00784-22

N/A

0DataRank · unranked

39 citations

Morgan A. Esler, Yuka Otsuka, Jordan T. Becker, Sofia N. Moraes, Constance B. Anderson +12 more

Targeting N-Myc in Neuroblastoma with Selective Aurora Kinase A Degraders

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.09.487756

N/A

0DataRank · unranked

5 citations

Ramkumar Moorthy, Özlem Demir, Zachary D. Baker, Jordan A. Naumann, Katherine F. M. Jones +10 more

APOBEC3B regulates R-loops and promotes transcription-associated mutagenesis in cancer

Nature Genetics(2023)10.1038/s41588-023-01504-w

N/A

0DataRank · unranked

79 citations

Agnese Cristini, Emily K. Law, Seo Yun Lee, Michael Tellier, Michael A. Carpenter +15 more

APOBEC3B drives PKR-mediated translation shutdown and protects stress granules in response to viral infection

Nature Communications(2023)10.1038/s41467-023-36445-9

N/A

0DataRank · unranked

45 citations

Sunwoo Oh, Pedro Ortega, Alexis Bouin, Elodie Bournique, Ambrocio Sanchez +8 more

DNA-encoded chemical libraries yield non-covalent and non-peptidic SARS-CoV-2 main protease inhibitors

Communications Chemistry(2023)10.1038/s42004-023-00961-y

N/A

0DataRank · unranked

17 citations

Srinivas Chamakuri, Shuo Lu, Melek N. Ucisik, Peng‐Jen Chen, Kurt M. Bohren +19 more

Human cytomegalovirus mediates APOBEC3B relocalization early during infection through a ribonucleotide reductase-independent mechanism

Journal of Virology(2023)10.1128/jvi.00781-23

N/A

0DataRank · unranked

14 citations

Adam Z. Cheng, Ashley A. Auerbach, Bojana Stefanovska, Sofia N. Moraes, James R. Lokensgard +6 more

Mitochondrial double-stranded RNA triggers induction of the antiviral DNA deaminase APOBEC3A and nuclear DNA damage

Journal of Biological Chemistry(2023)10.1016/j.jbc.2023.105073

N/A

0DataRank · unranked

9 citations

Seyed Arad Moghadasi, Jordan T. Becker, Elisa Fanunza, Sunwoo Oh, Elodie Bournique +3 more

Mesoscale DNA Features Impact APOBEC3A and APOBEC3B Deaminase Activity and Shape Tumor Mutational Landscapes

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.02.551499

N/A

0DataRank · unranked

5 citations

Pedro Ortega, Ramin Sakhtemani, Lavanya Manjunath, Sunwoo Oh, Elodie Bournique +9 more

Human cytomegalovirus mediates APOBEC3B relocalization early during infection through a ribonucleotide reductase-independent mechanism

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.30.526383

N/A

0DataRank · unranked

2 citations

Adam Z. Cheng, Ashley A. Auerbach, Bojana Stefanovska, Sofia N. Moraes, James R. Lokensgard +6 more

Mesoscale DNA features impact APOBEC3A and APOBEC3B deaminase activity and shape tumor mutational landscapes

Nature Communications(2024)10.1038/s41467-024-45909-5

N/A

0DataRank · unranked

35 citations

Pedro Ortega, Ramin Sakhtemani, Lavanya Manjunath, Sunwoo Oh, Elodie Bournique +9 more

A compact stem-loop DNA aptamer targets a uracil-binding pocket in the SARS-CoV-2 nucleocapsid RNA-binding domain

Nucleic Acids Research(2024)10.1093/nar/gkae874

N/A

0DataRank · unranked

18 citations

Christopher Belica, Joseph A. Rollie, William L. Brown, Seyed Arad Moghadasi, Ke Shi +4 more

Vulnerability to APOBEC3G linked to the pathogenicity of deltaretroviruses

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2309925121

N/A

0DataRank · unranked

22 citations

Jun‐ichirou Yasunaga, Kei Sato, Kisato Nosaka, Kosuke Toyoda, Miho Watanabe +11 more

A high-throughput cell-based screening method for Zika virus protease inhibitor discovery

SLAS DISCOVERY(2024)10.1016/j.slasd.2024.100164

N/A

0DataRank · unranked

6 citations

Yuka Otsuka, Simon Lattmann, Khac Huy Ngo, Chong Wai Liew, CongBao Kang +5 more

SARS-CoV-2 Mpro inhibitor identification using a cellular gain-of-signal assay for high-throughput screening

SLAS DISCOVERY(2024)10.1016/j.slasd.2024.100181

N/A

0DataRank · unranked

6 citations

Jyoti Vishwakarma, Seyed Arad Moghadasi, Yuka Otsuka, Justin Shumate, Ashley Cuell +14 more

RADD: A real-time FRET-based biochemical assay for DNA deaminase studies

Methods in enzymology on CD-ROM/Methods in enzymology(2024)10.1016/bs.mie.2024.08.001

N/A

0DataRank · unranked

1 citations

Patricia C. Hernández, Michael A. Carpenter, Yanjun Chen, William L. Brown, Reuben S. Harris +2 more

APOBEC shapes tumor evolution and age at onset of lung cancer in smokers

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.02.587805

N/A

0DataRank · unranked

5 citations

Jian Sang, Phuc H. Hoang, Wei Zhao, Jennifer Rosenbaum, Kofi Ennu Johnson +26 more

A real-time biochemical assay for quantitative analyses of APOBEC-catalyzed DNA deamination

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.11.593688

N/A

0DataRank · unranked

1 citations

Michael A. Carpenter, Yanjun Chen, William L. Brown, Nicholas H. Moeller, Ian T. Boylan +3 more

Mammalian ZAP and KHNYN can independently restrict CpG-enriched avian viruses

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.12.23.629495

N/A

0DataRank · unranked

1 citations

Clayton K. Mickelson, Lauren M. Pross, Autumn E. Sanders, Esther Vogt, Frances K. Shepherd +7 more

Development of Allosteric Small Molecule APOBEC3B Inhibitors from In Silico Screening

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.25.591187

N/A

0DataRank · unranked

0 citations

Özlem Demir, Mackenzie K. Wyllie, Michael J. Grillo, Clare K. Morris, Sophia P. Hirakis +6 more

Targeting N-Myc in neuroblastoma with selective Aurora kinase A degraders

Cell chemical biology(2025)10.1016/j.chembiol.2024.12.006

N/A

0DataRank · unranked

23 citations

Ramkumar Moorthy, Laura Hirsch, Özlem Demir, Zachary D. Baker, Jordan A. Naumann +12 more

APOBEC affects tumor evolution and age at onset of lung cancer in smokers

Nature Communications(2025)10.1038/s41467-025-59923-8

N/A

0DataRank · unranked

9 citations

Jian Sang, Phuc H. Hoang, Zhao Wei, Jennifer Rosenbaum, Kofi Ennu Johnson +26 more

Azapeptide-Based SARS-CoV-2 Main Protease Inhibitors: Design, Synthesis, Enzyme Inhibition, Structural Determination, and Antiviral Activity

Journal of Medicinal Chemistry(2025)10.1021/acs.jmedchem.5c01520

N/A

0DataRank · unranked

4 citations

Jyoti Vishwakarma, Katharina Sylvester, Nobuyo Higashi‐Kuwata, Agnieszka Dąbrowska, Renee Delgado +16 more

Structural basis for sequence context-independent single-stranded DNA cytosine deamination by the bacterial toxin SsdA

Nature Communications(2025)10.1038/s41467-025-63943-9

N/A

0DataRank · unranked

1 citations

Yanjun Chen, Ke Shi, Emilia Barreto-Durán, Reuben S. Harris, Hideki Aihara +1 more

Structural insights into the assembly and regulation of 2′-O RNA methylation by SARS-CoV-2 nsp16/nsp10

Structure(2025)10.1016/j.str.2025.03.009

N/A

0DataRank · unranked

2 citations

R Rahisuddin, Manish Parihar, Shailee Arya, Thiruselvam Viswanathan, Nathaniel Jackson +6 more

Tobacco smoke carcinogens exacerbate APOBEC mutagenesis and carcinogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.18.633716

N/A

0DataRank · unranked

3 citations

Erik N. Bergstrom, Marcos Díaz‐Gay, Yufan Zhou, Nuri A. Temiz, Mahmoud Ashry Ibrahim +10 more

Tobacco smoke carcinogens exacerbate APOBEC mutagenesis and carcinogenesis

Research Square(2025)10.21203/rs.3.rs-5843684/v1

N/A

0DataRank · unranked

1 citations

Erik N. Bergstrom, Marcos Díaz‐Gay, Yufan Zhou, Nuri A. Temiz, Shuvro P. Nandi +10 more

APOBEC3A catalyzes mutation and drives carcinogenesis in vivo

The Journal of Experimental Medicine(2020)10.1084/jem.20200261

N/A

0DataRank · unranked

154 citations

Rena Levin-Klein, Matthew C. Jarvis, Hyoung Kim, Prokopios P. Argyris, Michael A. Carpenter +14 more

A split luciferase system for studying coronavirus Mpro dimerization in vitro and in living cells

Journal of Biological Chemistry(2025)10.1016/j.jbc.2025.110890

N/A

0DataRank · unranked

0 citations

Jyoti Vishwakarma, Javier Sanlley-Hernandez, Megan Tansiongco, Ashley Cuell, Agnieszka Dąbrowska +8 more

APOBEC3B-mediated corruption of the tumor cell immunopeptidome induces heteroclitic neoepitopes for cancer immunotherapy

Nature Communications(2020)10.1038/s41467-020-14568-7

N/A

0DataRank · unranked

78 citations

Matthew Schuelke, Timothy Kottke, Jill Thompson, Phonphimon Wongthida, Jason M. Tonne +15 more

Structural basis of host protein hijacking in human T-cell leukemia virus integration

Nature Communications(2020)10.1038/s41467-020-16963-6

N/A

0DataRank · unranked

42 citations

Ke Shi, Daniel J. Salamango, Nicholas H. Moeller, Krishan K. Pandey, Sibes Bera +9 more