Vishwajeeth Pagala

Also affiliated with Proteogenomics Research Institute for Systems Medicine

Biochemistry, Genetics and Molecular BiologyChemistryNeuroscience

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 25 papers. Top paper: “Deep Multilayer Brain Proteomics Identifies Molecular Networks in Alzheimer’s Disease Progression”.

Deep Multilayer Brain Proteomics Identifies Molecular Networks in Alzheimer’s Disease Progression

Neuron(2020)10.1016/j.neuron.2019.12.015

N/A

7.9DataRank · unranked

616 citations

Xusheng Wang, Yuxin Li, Ping-Chung Chen, Kaiwen Yu, Kaushik Dey +29 more

Ybx1 fine-tunes PRC2 activities to control embryonic brain development

Nature Communications(2020)10.1038/s41467-020-17878-y

N/A

1.6DataRank · unranked

57 citations

Yurika Matsui, Beisi Xu, Catherine Willis, Jennifer F. Loome, Luis Milburn +4 more

Dynamic Foxp3–chromatin interaction controls tunable Treg cell function

The Journal of Experimental Medicine(2024)10.1084/jem.20232068

N/A

0.860DataRank · unranked

30 citations

Xinying Zong, Beisi Xu, Wenjie Qi, Wenjun Huang, Mohamed Nadhir Djekidel +11 more

Metabolic reprogramming of cancer cells by JMJD6-mediated pre-mRNA splicing associated with therapeutic response to splicing inhibitor

eLife(2023)10.7554/elife.90993

N/A

0.754DataRank · unranked

35 citations

Waise Quarni, Shivendra V. Singh, Haiyan Tan, Dhanushka Hewa Bostanthirige, Hongjian Jin +16 more

Targeted Bmal1 restoration in muscle prolongs lifespan with systemic health effects in aging model

JCI Insight(2024)10.1172/jci.insight.174007

N/A

0.613DataRank · unranked

26 citations

Christopher A. Wolff, Eduardo E Rijos, Mark Viggars, Collin M. Douglas, Vishwajeeth Pagala +7 more

Proteome solubility is differentially reshaped by thermal stress and regulators of ubiquitination

Journal of Biological Chemistry(2025)10.1016/j.jbc.2025.110517

N/A

0.165DataRank · unranked

2 citations

Anna Stephan, Suresh Poudel, Kaiwen Yu, Kanisha Kavdia, Vishwajeeth Pagala +11 more

Dynamic Changes in ABCC4 Protein‐Protein Interactions during PKA Signaling: Role of the ABCC4 PDZ Motif

The FASEB Journal(2022)10.1096/fasebj.2022.36.s1.r4934

N/A

0DataRank · unranked

0 citations

Jingwen Zhu, Aaron Pitre, Yao Wang, Rebecca Crawford, Amanda Nourse +5 more

An adaptive stress response that confers cellular resilience to decreased ubiquitination

Nature Communications(2023)10.1038/s41467-023-43262-7

N/A

0DataRank · unranked

34 citations

Vishwajeeth Pagala, Anna Stephan, Boer Xie, Kiran Kodali, Kanisha Kavdia +12 more

The ubiquitin-conjugating enzyme UBE2D/eff maintains a youthful proteome and ensures protein quality control during aging

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.12.571303

N/A

0DataRank · unranked

3 citations

Kudzai Nyamkondiwa, Anna Stephan, Jianqin Jiao, Kanisha Kavdia, Vishwajeeth Pagala +3 more

Phosphorylation of 53BP1 by ATM enforce neurodevelopmental programs in cortical organoids

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.04.539457

N/A

0DataRank · unranked

1 citations

Mohamed Nadhir Djekidel, Yurika Matsui, Seung‐Hyun Jung, Zuo‐Fei Yuan, Xusheng Wang +12 more

Metabolic reprogramming of cancer cells by JMJD6-mediated pre-mRNA splicing is associated with therapeutic response to splicing inhibitor

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.26.546606

N/A

0DataRank · unranked

1 citations

Waise Quarni, Shivendra V. Singh, Haiyan Tan, Dhanushka Hewa Bostanthirige, Hongjian Jin +16 more

Antagonistic control of myofiber size and muscle protein quality control by the ubiquitin ligase UBR4 during aging

Nature Communications(2021)10.1038/s41467-021-21738-8

N/A

0DataRank · unranked

75 citations

Bronwen Schadeberg, Jared Stover, Benard Haugen, Vishwajeeth Pagala, Lei Wang +5 more

Transgenic sensors reveal compartment-specific effects of aggregation-prone proteins on subcellular proteostasis during aging

Cell Reports Methods(2024)10.1016/j.crmeth.2024.100875

N/A

0DataRank · unranked

7 citations

Mamta Rai, Chia-Lung Chuang, Vishwajeeth Pagala, Anna Stephan, Zane Coleman +5 more

Phosphorylation of the DNA damage repair factor 53BP1 by ATM kinase controls neurodevelopmental programs in cortical brain organoids

PLoS Biology(2024)10.1371/journal.pbio.3002760

N/A

0DataRank · unranked

4 citations

Yurika Matsui, Seung‐Hyun Jung, Mohamed Nadhir Djekidel, Wenjie Qi, Zuo‐Fei Yuan +14 more

Linear poly-ubiquitin remodels the proteome and influences hundreds of regulators in Drosophila

G3 Genes Genomes Genetics(2024)10.1093/g3journal/jkae209

N/A

0DataRank · unranked

1 citations

Kristin Richardson, Nikhil Patel, Xusheng Wang, Vishwajeeth Pagala, Anna Stephan +4 more

Reviewer #1 (Public Review): Metabolic reprogramming of cancer cells by JMJD6-mediated pre-mRNA splicing is associated with therapeutic response to splicing inhibitor

(2024)10.7554/elife.90993.2.sa1

N/A

0DataRank · unranked

0 citations

Waise Quarni, Shivendra Singh, Haiyan Tan, Dhanushka Hewa Bostanthirige, Hongjian Jin +16 more

Metabolic reprogramming of cancer cells by JMJD6-mediated pre-mRNA splicing is associated with therapeutic response to splicing inhibitor

eLife(2024)10.7554/elife.90993.2

N/A

0DataRank · unranked

0 citations

Waise Quarni, Shivendra V. Singh, Haiyan Tan, Dhanushka Hewa Bostanthirige, Hongjian Jin +16 more

Author Response: Metabolic reprogramming of cancer cells by JMJD6-mediated pre-mRNA splicing is associated with therapeutic response to splicing inhibitor

(2024)10.7554/elife.90993.2.sa3

N/A

0DataRank · unranked

0 citations

Waise Quarni, Shivendra V. Singh, Haiyan Tan, Dhanushka Hewa Bostanthirige, Hongjian Jin +16 more

Reviewer #3 (Public Review): The ubiquitin-conjugating enzyme UBE2D/eff maintains a youthful proteome and ensures protein quality control during aging

(2024)10.7554/elife.94739.1.sa0

N/A

0DataRank · unranked

0 citations

Kudzai Nyamkondiwa, Anna Stephan, Jianqin Jiao, Kanisha Kavdia, Vishwajeeth Pagala +3 more

The ubiquitin-conjugating enzyme UBE2D maintains a youthful proteome and ensures protein quality control during aging by sustaining proteasome activity

PLoS Biology(2025)10.1371/journal.pbio.3002998

N/A

0DataRank · unranked

13 citations

Michelle Curley, Kudzai Nyamkondiwa, Anna Stephan, Jianqin Jiao, Kanisha Kavdia +4 more

PROTAC repurposing uncovers a noncanonical binding surface that mediates chemical degradation of nuclear receptors

Nature Communications(2025)10.1038/s41467-025-64773-5

N/A

0DataRank · unranked

1 citations

Wenwei Lin, Kwan‐Young Jung, Shyaron Poudel, Guangwei Yang, Jing Wu +15 more

Integrated genomic and proteomic analyses identify stimulus-dependent molecular changes associated with distinct modes of skeletal muscle atrophy

Cell Reports(2021)10.1016/j.celrep.2021.109971

N/A

0DataRank · unranked

69 citations

Flávia A. Graça, Vishwajeeth Pagala, Lei Wang, Yuxin Li, Zuo‐Fei Yuan +5 more

Protein Kinase A and assembly of an ABCC4 protein network

Nature Communications(2025)10.1038/s41467-025-66877-4

N/A

0DataRank · unranked

0 citations

Sabina Ranjit, Tomoka Gose, Amanda Nourse, Vishwajeeth Pagala, Zuo‐Fei Yuan +9 more

An age-downregulated ribosomal RpS28 protein variant regulates the muscle proteome

G3 Genes Genomes Genetics(2021)10.1093/g3journal/jkab165

N/A

0DataRank · unranked

23 citations

Kanisha Kavdia, Vishwajeeth Pagala, Lance E. Palmer, David Finkelstein, Yiping Fan +3 more

Integrative network analysis reveals USP7 haploinsufficiency inhibits E-protein activity in pediatric T-lineage acute lymphoblastic leukemia (T-ALL)

Scientific Reports(2021)10.1038/s41598-021-84647-2

N/A

0DataRank · unranked

13 citations

Li Dong, Liqing Tian, Chenxi Qian, Yu Liu, Bensheng Ju +19 more